RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 F2RP25116 425 aa13.8□□□□□ -0.2
LINC00887-203ENST00000429578 REG1BP48304 166 aa13.8□□□□□ -0.2
LINC00887-203ENST00000429578 BPIFB3P59826 476 aa13.8□□□□□ -0.2
LINC00887-203ENST00000429578 SUPT4H1P63272 117 aaKnown RBP13.8□□□□□ -0.2
LINC00887-203ENST00000429578 CATR1Q13166 79 aa13.8□□□□□ -0.2
LINC00887-203ENST00000429578 PPP1R1AQ13522 171 aa13.8□□□□□ -0.2
LINC00887-203ENST00000429578 C4orf46Q504U0 113 aa13.8□□□□□ -0.2
LINC00887-203ENST00000429578 RUSC1-AS1Q66K80 236 aa13.8□□□□□ -0.2
LINC00887-203ENST00000429578 BRD3OSQ6XYD6 125 aa13.8□□□□□ -0.2
LINC00887-203ENST00000429578 KCTD9Q7L273 389 aa13.8□□□□□ -0.2
LINC00887-203ENST00000429578 TEX29Q8N6K0 151 aa13.8□□□□□ -0.2
LINC00887-203ENST00000429578 OR51H1Q8NH63 302 aa13.8□□□□□ -0.2
LINC00887-203ENST00000429578 MALSU1Q96EH3 234 aa13.8□□□□□ -0.2
LINC00887-203ENST00000429578 ADTRPQ96IZ2 230 aa13.8□□□□□ -0.2
LINC00887-203ENST00000429578 NAA60Q9H7X0 242 aa13.8□□□□□ -0.2
LINC00887-203ENST00000429578 OOSP1A8MZH6 123 aa13.79□□□□□ -0.2
LINC00887-203ENST00000429578 IL5P05113 134 aa13.79□□□□□ -0.2
LINC00887-203ENST00000429578 THBS3P49746 956 aa13.79□□□□□ -0.2
LINC00887-203ENST00000429578 LINC00205P59089 165 aa13.79□□□□□ -0.2
LINC00887-203ENST00000429578 RPL30P62888 115 aaKnown RBP13.79□□□□□ -0.2
LINC00887-203ENST00000429578 C11orf88Q6PI97 169 aa13.79□□□□□ -0.2
LINC00887-203ENST00000429578 GLDNQ6ZMI3 551 aaPredicted RBP13.79□□□□□ -0.2
LINC00887-203ENST00000429578 AJUBAQ96IF1 538 aa13.79□□□□□ -0.2
LINC00887-203ENST00000429578 YAE1D1Q9NRH1 226 aa13.79□□□□□ -0.2
LINC00887-203ENST00000429578 KCNIP3Q9Y2W7 256 aa13.79□□□□□ -0.2
LINC00887-203ENST00000429578 HILPDAQ9Y5L2 63 aa13.79□□□□□ -0.2
LINC00887-203ENST00000429578 NAV3Q8IVL0 2385 aa13.79□□□□□ -0.2
LINC00887-203ENST00000429578 C3orf85A0A1B0GTC6 90 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 A8MV72 311 aaPredicted RBP13.78□□□□□ -0.2
LINC00887-203ENST00000429578 HLA-AP01891 365 aaKnown RBP13.78□□□□□ -0.2
LINC00887-203ENST00000429578 VAMP1P23763 118 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 DHRS2Q13268 280 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 SSX2Q16385 188 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 TATDN3Q17R31 274 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 C17orf50Q8WW18 174 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 TCTEX1D2Q8WW35 142 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 DDB2Q92466 427 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 GALNT14Q96FL9 552 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 NABP2Q9BQ15 211 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 MRPL20Q9BYC9 149 aaKnown RBP13.78□□□□□ -0.2
LINC00887-203ENST00000429578 LIN7CQ9NUP9 197 aaKnown RBP13.78□□□□□ -0.2
LINC00887-203ENST00000429578 NUP50Q9UKX7 468 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 A0A0B4J293 547 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 IGHV1-3A0A0C4DH29 117 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 C9orf170A2RU37 121 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 B3GALNT1O75752 331 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 OR5AC1P0C628 307 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 CCDC144NLQ6NUI1 221 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 LYG2Q86SG7 212 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 OR8H3Q8N146 312 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 TCTEX1D1Q8N7M0 179 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 ZNF383Q8NA42 475 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 TP53RKQ96S44 253 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 PRELID3BQ9Y3B1 194 aa13.78□□□□□ -0.2
LINC00887-203ENST00000429578 FN1P02751 2386 aaKnown RBP13.78□□□□□ -0.2
LINC00887-203ENST00000429578 SONP18583 2426 aaKnown RBP13.77□□□□□ -0.2
LINC00887-203ENST00000429578 A0A1W2PPI3 338 aa13.77□□□□□ -0.21
LINC00887-203ENST00000429578 H0Y980 276 aa13.77□□□□□ -0.21
LINC00887-203ENST00000429578 SFT2D2O95562 160 aa13.77□□□□□ -0.21
LINC00887-203ENST00000429578 ANXA3P12429 323 aa13.77□□□□□ -0.21
LINC00887-203ENST00000429578 FAM120AOSQ5T036 256 aa13.77□□□□□ -0.21
LINC00887-203ENST00000429578 Q6ZNX1 250 aa13.77□□□□□ -0.21
LINC00887-203ENST00000429578 DYNAPQ8N1N2 210 aa13.77□□□□□ -0.21
LINC00887-203ENST00000429578 OR5AN1Q8NGI8 311 aa13.77□□□□□ -0.21
LINC00887-203ENST00000429578 SEC22CQ9BRL7 303 aa13.77□□□□□ -0.21
LINC00887-203ENST00000429578 GPN1Q9HCN4 374 aaPredicted RBP13.77□□□□□ -0.21
LINC00887-203ENST00000429578 NSD1Q96L73 2696 aaPredicted RBP13.77□□□□□ -0.21
LINC00887-203ENST00000429578 C7orf66A4D0T2 115 aa13.76□□□□□ -0.21
LINC00887-203ENST00000429578 IFNA2P01563 188 aa13.76□□□□□ -0.21
LINC00887-203ENST00000429578 TAGLNQ01995 201 aaKnown RBP13.76□□□□□ -0.21
LINC00887-203ENST00000429578 SLC9A3R2Q15599 337 aa13.76□□□□□ -0.21
LINC00887-203ENST00000429578 SP6Q3SY56 376 aa13.76□□□□□ -0.21
LINC00887-203ENST00000429578 OR52B4Q8NGK2 314 aa13.76□□□□□ -0.21
LINC00887-203ENST00000429578 GLYATL2Q8WU03 294 aa13.76□□□□□ -0.21
LINC00887-203ENST00000429578 FAM212BQ9NTI7 297 aaPredicted RBP13.76□□□□□ -0.21
LINC00887-203ENST00000429578 ANK3Q12955 4377 aaKnown RBP13.76□□□□□ -0.21
LINC00887-203ENST00000429578 A0A0U1RQK1 487 aa13.76□□□□□ -0.21
LINC00887-203ENST00000429578 SNRPGP15A8MWD9 76 aa13.76□□□□□ -0.21
LINC00887-203ENST00000429578 H0YJW9 148 aa13.76□□□□□ -0.21
LINC00887-203ENST00000429578 DUS4LO95620 317 aaKnown RBP13.76□□□□□ -0.21
LINC00887-203ENST00000429578 UCP1P25874 307 aa13.76□□□□□ -0.21
LINC00887-203ENST00000429578 MC5RP33032 325 aa13.76□□□□□ -0.21
LINC00887-203ENST00000429578 BRWD1-AS2P59051 145 aa13.76□□□□□ -0.21
LINC00887-203ENST00000429578 HABP2Q14520 560 aaPredicted RBP13.76□□□□□ -0.21
LINC00887-203ENST00000429578 MOB3BQ86TA1 216 aa13.76□□□□□ -0.21
LINC00887-203ENST00000429578 SPAG16Q8N0X2 631 aa13.76□□□□□ -0.21
LINC00887-203ENST00000429578 CD300LFQ8TDQ1 290 aa13.76□□□□□ -0.21
LINC00887-203ENST00000429578 ZNF431Q8TF32 576 aaPredicted RBP13.76□□□□□ -0.21
LINC00887-203ENST00000429578 TMEM222Q9H0R3 208 aa13.76□□□□□ -0.21
LINC00887-203ENST00000429578 TMEM160Q9NX00 188 aa13.76□□□□□ -0.21
LINC00887-203ENST00000429578 HIVEP2P31629 2446 aa13.75□□□□□ -0.21
LINC00887-203ENST00000429578 A0A0A6YYJ9 748 aa13.75□□□□□ -0.21
LINC00887-203ENST00000429578 RBFOX2O43251 390 aaKnown RBP eCLIP13.75□□□□□ -0.21
LINC00887-203ENST00000429578 RAMP3O60896 148 aa13.75□□□□□ -0.21
LINC00887-203ENST00000429578 APOA2P02652 100 aa13.75□□□□□ -0.21
LINC00887-203ENST00000429578 PAX6P26367 422 aa13.75□□□□□ -0.21
LINC00887-203ENST00000429578 KIR2DS2P43631 304 aa13.75□□□□□ -0.21
LINC00887-203ENST00000429578 ARHGDIBP52566 201 aa13.75□□□□□ -0.21
LINC00887-203ENST00000429578 TMEM187Q14656 261 aa13.75□□□□□ -0.21
LINC00887-203ENST00000429578 OR2B11Q5JQS5 317 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms