RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 TMEM147Q9BVK8 224 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 MRPL37Q9BZE1 423 aaKnown RBP11.39□□□□□ -0.59
THBS3-202ENST00000428962 KIAA2026Q5HYC2 2103 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 IGHV3OR15-7A0A075B7D8 119 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 MARCH11A6NNE9 402 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 A8MXE2 369 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 DEFB108AA8MXU0 73 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 RBMXL2O75526 392 aaKnown RBP11.39□□□□□ -0.59
THBS3-202ENST00000428962 KIR2DS2P43631 304 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 BRWD1-AS2P59051 145 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 LTC4SQ16873 150 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 RNF212Q495C1 297 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 ZNF787Q6DD87 383 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 OR8G2PQ6IF36 304 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 ETV3LQ6ZN32 361 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 LINC00518Q8N0U6 118 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 OR10G4Q8NGN3 311 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 MBD3L1Q8WWY6 194 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 R3HDM4Q96D70 268 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 OR4C12Q96R67 309 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 DCTN5Q9BTE1 182 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 EGLN1Q9GZT9 426 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 BIN3Q9NQY0 253 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 RPRMQ9NS64 109 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 IL19Q9UHD0 177 aa11.39□□□□□ -0.59
THBS3-202ENST00000428962 GTF3C1Q12789 2109 aa11.38□□□□□ -0.59
THBS3-202ENST00000428962 LOC102723971A0A1B0GUV8 181 aa11.38□□□□□ -0.59
THBS3-202ENST00000428962 LINC00473A8K010 186 aa11.38□□□□□ -0.59
THBS3-202ENST00000428962 PRRG2O14669 202 aa11.38□□□□□ -0.59
THBS3-202ENST00000428962 ITGB1BP1O14713 200 aa11.38□□□□□ -0.59
THBS3-202ENST00000428962 RBFOX2O43251 390 aaKnown RBP eCLIP11.38□□□□□ -0.59
THBS3-202ENST00000428962 HPRT1P00492 218 aa11.38□□□□□ -0.59
THBS3-202ENST00000428962 IFNA1P01562 189 aa11.38□□□□□ -0.59
THBS3-202ENST00000428962 DUTP33316 252 aaKnown RBP11.38□□□□□ -0.59
THBS3-202ENST00000428962 AKR1C3P42330 323 aa11.38□□□□□ -0.59
THBS3-202ENST00000428962 RAB7AP51149 207 aa11.38□□□□□ -0.59
THBS3-202ENST00000428962 EDDM3BP56851 147 aa11.38□□□□□ -0.59
THBS3-202ENST00000428962 RAB5BP61020 215 aa11.38□□□□□ -0.59
THBS3-202ENST00000428962 S100A12P80511 92 aa11.38□□□□□ -0.59
THBS3-202ENST00000428962 TNFAIP6P98066 277 aaPredicted RBP11.38□□□□□ -0.59
THBS3-202ENST00000428962 MRGPRGQ86SM5 289 aa11.38□□□□□ -0.59
THBS3-202ENST00000428962 NUP37Q8NFH4 326 aa11.38□□□□□ -0.59
THBS3-202ENST00000428962 OR10P1Q8NGE3 313 aa11.38□□□□□ -0.59
THBS3-202ENST00000428962 FAM222BQ8WU58 562 aa11.38□□□□□ -0.59
THBS3-202ENST00000428962 C20orf24Q9BUV8 137 aa11.38□□□□□ -0.59
THBS3-202ENST00000428962 SAV1Q9H4B6 383 aaPredicted RBP11.38□□□□□ -0.59
THBS3-202ENST00000428962 CALYQ9NYX4 217 aa11.38□□□□□ -0.59
THBS3-202ENST00000428962 RNF7Q9UBF6 113 aa11.38□□□□□ -0.59
THBS3-202ENST00000428962 PUS1Q9Y606 427 aaKnown RBP eCLIP11.38□□□□□ -0.59
THBS3-202ENST00000428962 CEBPZOSA8MTT3 80 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 K7EM74 188 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 BMP5P22003 454 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 CD40P25942 277 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 ERVK-16P61578 105 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 CENPVQ7Z7K6 275 aaPredicted RBP11.37□□□□□ -0.59
THBS3-202ENST00000428962 HIST1H2BAQ96A08 127 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 ELOVL5Q9NYP7 299 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 CISD1Q9NZ45 108 aaKnown RBP11.37□□□□□ -0.59
THBS3-202ENST00000428962 GNG13Q9P2W3 67 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 CLN8Q9UBY8 286 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 FRYQ5TBA9 3013 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 HEATR1Q9H583 2144 aaKnown RBP11.37□□□□□ -0.59
THBS3-202ENST00000428962 C1orf196B1AJZ1 125 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 H3BQ15 152 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 MBP02144 154 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 BCL2P10415 239 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 PTAFRP25105 342 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 RPP30P78346 268 aaKnown RBP11.37□□□□□ -0.59
THBS3-202ENST00000428962 TMEM108Q6UXF1 575 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 SSX8Q7RTT4 187 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 LURAP1LQ8IV03 231 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 ZNRF1Q8ND25 227 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 SDSLQ96GA7 329 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 RCC1LQ96I51 464 aaKnown RBP11.37□□□□□ -0.59
THBS3-202ENST00000428962 NIPSNAP3BQ9BS92 247 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 GAB2Q9UQC2 676 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 KLF2Q9Y5W3 355 aaPredicted RBP11.37□□□□□ -0.59
THBS3-202ENST00000428962 ASPMQ8IZT6 3477 aa11.37□□□□□ -0.59
THBS3-202ENST00000428962 IGF2RP11717 2491 aa11.36□□□□□ -0.59
THBS3-202ENST00000428962 AKAP13Q12802 2813 aa11.36□□□□□ -0.59
THBS3-202ENST00000428962 M0R1X1 148 aa11.36□□□□□ -0.59
THBS3-202ENST00000428962 ZG16O60844 167 aa11.36□□□□□ -0.59
THBS3-202ENST00000428962 FCGR3BO75015 233 aa11.36□□□□□ -0.59
THBS3-202ENST00000428962 IGHV1-46P01743 117 aa11.36□□□□□ -0.59
THBS3-202ENST00000428962 LOXL3P58215 753 aa11.36□□□□□ -0.59
THBS3-202ENST00000428962 FAM27E3Q08E93 113 aa11.36□□□□□ -0.59
THBS3-202ENST00000428962 TMEM30BQ3MIR4 351 aa11.36□□□□□ -0.59
THBS3-202ENST00000428962 AARDQ4LEZ3 155 aa11.36□□□□□ -0.59
THBS3-202ENST00000428962 NCR3LG1Q68D85 454 aa11.36□□□□□ -0.59
THBS3-202ENST00000428962 CYB561D1Q8N8Q1 229 aa11.36□□□□□ -0.59
THBS3-202ENST00000428962 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.36□□□□□ -0.59
THBS3-202ENST00000428962 Q8TCH9 128 aa11.36□□□□□ -0.59
THBS3-202ENST00000428962 FAM234AQ9H0X4 552 aa11.36□□□□□ -0.59
THBS3-202ENST00000428962 CACNA1BQ00975 2339 aa11.36□□□□□ -0.59
THBS3-202ENST00000428962 A0A087WWC5 75 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 TRGV10A0A0A0MS01 117 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 MAP1LC3B2A6NCE7 125 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 IRF2P14316 349 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 CEBPGP53567 150 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 ELLP55199 621 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms