RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 C18orf65Q6ZTR6 163 aa13.09□□□□□ -0.31
VRK2-204ENST00000428021 RNF152Q8N8N0 203 aa13.09□□□□□ -0.31
VRK2-204ENST00000428021 DDB2Q92466 427 aa13.09□□□□□ -0.31
VRK2-204ENST00000428021 SNAPC3Q92966 411 aa13.09□□□□□ -0.31
VRK2-204ENST00000428021 GON7Q9BXV9 100 aa13.09□□□□□ -0.31
VRK2-204ENST00000428021 SLC35D1Q9NTN3 355 aa13.09□□□□□ -0.31
VRK2-204ENST00000428021 LINC00473A8K010 186 aa13.08□□□□□ -0.32
VRK2-204ENST00000428021 ATP6V0E1O15342 81 aa13.08□□□□□ -0.32
VRK2-204ENST00000428021 IGLV2-23P01705 113 aa13.08□□□□□ -0.32
VRK2-204ENST00000428021 IGHG4P01861 327 aa13.08□□□□□ -0.32
VRK2-204ENST00000428021 APOA1P02647 267 aa13.08□□□□□ -0.32
VRK2-204ENST00000428021 DUTP33316 252 aaKnown RBP13.08□□□□□ -0.32
VRK2-204ENST00000428021 THBS3P49746 956 aa13.08□□□□□ -0.32
VRK2-204ENST00000428021 RORCP51449 518 aa13.08□□□□□ -0.32
VRK2-204ENST00000428021 LUMP51884 338 aaPredicted RBP13.08□□□□□ -0.32
VRK2-204ENST00000428021 RPS16P62249 146 aaKnown RBP13.08□□□□□ -0.32
VRK2-204ENST00000428021 KHDC1LQ5JSQ8 128 aa13.08□□□□□ -0.32
VRK2-204ENST00000428021 TMEM69Q5SWH9 247 aa13.08□□□□□ -0.32
VRK2-204ENST00000428021 TEX38Q6PEX7 206 aa13.08□□□□□ -0.32
VRK2-204ENST00000428021 LCNL1Q6ZST4 164 aa13.08□□□□□ -0.32
VRK2-204ENST00000428021 GPR141Q7Z602 305 aa13.08□□□□□ -0.32
VRK2-204ENST00000428021 ZNF645Q8N7E2 425 aa13.08□□□□□ -0.32
VRK2-204ENST00000428021 ACOT12Q8WYK0 555 aa13.08□□□□□ -0.32
VRK2-204ENST00000428021 FLYWCH2Q96CP2 140 aaKnown RBP13.08□□□□□ -0.32
VRK2-204ENST00000428021 CMTM3Q96MX0 182 aa13.08□□□□□ -0.32
VRK2-204ENST00000428021 TSNAXQ99598 290 aaKnown RBP13.08□□□□□ -0.32
VRK2-204ENST00000428021 ZFP57Q9NU63 452 aa13.08□□□□□ -0.32
VRK2-204ENST00000428021 ANAPC10Q9UM13 185 aa13.08□□□□□ -0.32
VRK2-204ENST00000428021 FBXO7Q9Y3I1 522 aa13.08□□□□□ -0.32
VRK2-204ENST00000428021 WSB1Q9Y6I7 421 aa13.08□□□□□ -0.32
VRK2-204ENST00000428021 MEIS3P1A6NDR6 274 aa13.07□□□□□ -0.32
VRK2-204ENST00000428021 G3V318 75 aa13.07□□□□□ -0.32
VRK2-204ENST00000428021 SPDEFO95238 335 aa13.07□□□□□ -0.32
VRK2-204ENST00000428021 EGR2P11161 476 aaPredicted RBP13.07□□□□□ -0.32
VRK2-204ENST00000428021 VDAC1P21796 283 aa13.07□□□□□ -0.32
VRK2-204ENST00000428021 PPIFP30405 207 aaKnown RBP13.07□□□□□ -0.32
VRK2-204ENST00000428021 CBX5P45973 191 aa13.07□□□□□ -0.32
VRK2-204ENST00000428021 CX3CL1P78423 397 aa13.07□□□□□ -0.32
VRK2-204ENST00000428021 TAGLNQ01995 201 aaKnown RBP13.07□□□□□ -0.32
VRK2-204ENST00000428021 FOXE3Q13461 319 aa13.07□□□□□ -0.32
VRK2-204ENST00000428021 C19orf54Q5BKX5 351 aa13.07□□□□□ -0.32
VRK2-204ENST00000428021 ZNF660Q6AZW8 331 aaPredicted RBP13.07□□□□□ -0.32
VRK2-204ENST00000428021 BVESQ8NE79 360 aa13.07□□□□□ -0.32
VRK2-204ENST00000428021 PARP11Q9NR21 331 aa13.07□□□□□ -0.32
VRK2-204ENST00000428021 TPSG1Q9NRR2 321 aa13.07□□□□□ -0.32
VRK2-204ENST00000428021 METTL1Q9UBP6 276 aaKnown RBP13.07□□□□□ -0.32
VRK2-204ENST00000428021 SRRM4A7MD48 611 aaKnown RBP13.06□□□□□ -0.32
VRK2-204ENST00000428021 HPGDSO60760 199 aa13.06□□□□□ -0.32
VRK2-204ENST00000428021 RPLP1P05386 114 aaKnown RBP13.06□□□□□ -0.32
VRK2-204ENST00000428021 CRYGBP07316 175 aa13.06□□□□□ -0.32
VRK2-204ENST00000428021 ELANEP08246 267 aa13.06□□□□□ -0.32
VRK2-204ENST00000428021 PF4V1P10720 104 aa13.06□□□□□ -0.32
VRK2-204ENST00000428021 ELK1P19419 428 aa13.06□□□□□ -0.32
VRK2-204ENST00000428021 PSMB8P28062 276 aa13.06□□□□□ -0.32
VRK2-204ENST00000428021 CRIP2P52943 208 aaPredicted RBP13.06□□□□□ -0.32
VRK2-204ENST00000428021 ARPC4P59998 168 aa13.06□□□□□ -0.32
VRK2-204ENST00000428021 EIF4EBP1Q13541 118 aaPredicted RBP13.06□□□□□ -0.32
VRK2-204ENST00000428021 PLGLAQ15195 96 aa13.06□□□□□ -0.32
VRK2-204ENST00000428021 TMEM177Q53S58 311 aa13.06□□□□□ -0.32
VRK2-204ENST00000428021 ETV3LQ6ZN32 361 aa13.06□□□□□ -0.32
VRK2-204ENST00000428021 WFDC9Q8NEX5 89 aa13.06□□□□□ -0.32
VRK2-204ENST00000428021 ADTRPQ96IZ2 230 aa13.06□□□□□ -0.32
VRK2-204ENST00000428021 RBMX2Q9Y388 322 aaKnown RBP13.06□□□□□ -0.32
VRK2-204ENST00000428021 G3V4G9 280 aa13.05□□□□□ -0.32
VRK2-204ENST00000428021 SLC25A17O43808 307 aa13.05□□□□□ -0.32
VRK2-204ENST00000428021 OR5H8P0DN80 308 aa13.05□□□□□ -0.32
VRK2-204ENST00000428021 RRASP10301 218 aa13.05□□□□□ -0.32
VRK2-204ENST00000428021 ZNF182P17025 639 aaPredicted RBP13.05□□□□□ -0.32
VRK2-204ENST00000428021 NAT1P18440 290 aa13.05□□□□□ -0.32
VRK2-204ENST00000428021 AADACP22760 399 aa13.05□□□□□ -0.32
VRK2-204ENST00000428021 FCGR2CP31995 323 aa13.05□□□□□ -0.32
VRK2-204ENST00000428021 LGALS7P47929 136 aa13.05□□□□□ -0.32
VRK2-204ENST00000428021 RPL30P62888 115 aaKnown RBP13.05□□□□□ -0.32
VRK2-204ENST00000428021 DEFA6Q01524 100 aa13.05□□□□□ -0.32
VRK2-204ENST00000428021 RTL8BQ17RB0 113 aa13.05□□□□□ -0.32
VRK2-204ENST00000428021 CXorf66Q5JRM2 361 aaPredicted RBP13.05□□□□□ -0.32
VRK2-204ENST00000428021 SAMD5Q5TGI4 173 aa13.05□□□□□ -0.32
VRK2-204ENST00000428021 C1QL4Q86Z23 238 aa13.05□□□□□ -0.32
VRK2-204ENST00000428021 OR5AP2Q8NGF4 316 aa13.05□□□□□ -0.32
VRK2-204ENST00000428021 CLCC1Q96S66 551 aa13.05□□□□□ -0.32
VRK2-204ENST00000428021 NECAP2Q9NVZ3 263 aa13.05□□□□□ -0.32
VRK2-204ENST00000428021 NUBP2Q9Y5Y2 271 aa13.05□□□□□ -0.32
VRK2-204ENST00000428021 TRAV41A0A0B4J266 112 aa13.04□□□□□ -0.32
VRK2-204ENST00000428021 SLC22A5O76082 557 aa13.04□□□□□ -0.32
VRK2-204ENST00000428021 IGLV1-40P01703 118 aa13.04□□□□□ -0.32
VRK2-204ENST00000428021 PRSS3P35030 304 aa13.04□□□□□ -0.32
VRK2-204ENST00000428021 SSBP2P81877 361 aaPredicted RBP13.04□□□□□ -0.32
VRK2-204ENST00000428021 KIAA0141Q14154 515 aaPredicted RBP13.04□□□□□ -0.32
VRK2-204ENST00000428021 SPCS2Q15005 226 aa13.04□□□□□ -0.32
VRK2-204ENST00000428021 MRGPRG-AS1Q2M3A8 158 aa13.04□□□□□ -0.32
VRK2-204ENST00000428021 ZNF562Q6V9R5 426 aa13.04□□□□□ -0.32
VRK2-204ENST00000428021 C8orf86Q6ZUL3 223 aa13.04□□□□□ -0.32
VRK2-204ENST00000428021 CLVS1Q8IUQ0 354 aaPredicted RBP13.04□□□□□ -0.32
VRK2-204ENST00000428021 MINDY2Q8NBR6 621 aa13.04□□□□□ -0.32
VRK2-204ENST00000428021 MYOZ3Q8TDC0 251 aa13.04□□□□□ -0.32
VRK2-204ENST00000428021 GPX8Q8TED1 209 aa13.04□□□□□ -0.32
VRK2-204ENST00000428021 HARBI1Q96MB7 349 aa13.04□□□□□ -0.32
VRK2-204ENST00000428021 KLK15Q9H2R5 256 aa13.04□□□□□ -0.32
VRK2-204ENST00000428021 IFT46Q9NQC8 304 aa13.04□□□□□ -0.32
VRK2-204ENST00000428021 MRPS7Q9Y2R9 242 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms