RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 OR8U9P0C7N5 309 aa14.29□□□□□ -0.12
PSPC1-202ENST00000427943 ZNF616Q08AN1 781 aa14.29□□□□□ -0.12
PSPC1-202ENST00000427943 C11orf87Q6NUJ2 197 aa14.29□□□□□ -0.12
PSPC1-202ENST00000427943 PDPNQ86YL7 162 aa14.29□□□□□ -0.12
PSPC1-202ENST00000427943 OR1N2Q8NGR9 330 aa14.29□□□□□ -0.12
PSPC1-202ENST00000427943 OR10J5Q8NHC4 309 aa14.29□□□□□ -0.12
PSPC1-202ENST00000427943 C5orf30Q96GV9 206 aa14.29□□□□□ -0.12
PSPC1-202ENST00000427943 TOLLIPQ9H0E2 274 aa14.29□□□□□ -0.12
PSPC1-202ENST00000427943 Q9H521 79 aa14.29□□□□□ -0.12
PSPC1-202ENST00000427943 SLC35D1Q9NTN3 355 aa14.29□□□□□ -0.12
PSPC1-202ENST00000427943 ELF5Q9UKW6 265 aaPredicted RBP14.29□□□□□ -0.12
PSPC1-202ENST00000427943 TRBV6-7A0A0A0MS04 114 aa14.28□□□□□ -0.12
PSPC1-202ENST00000427943 METTL21EPA6NDL7 271 aa14.28□□□□□ -0.12
PSPC1-202ENST00000427943 SLC25A17O43808 307 aa14.28□□□□□ -0.12
PSPC1-202ENST00000427943 OR8U8P0C7N1 319 aa14.28□□□□□ -0.12
PSPC1-202ENST00000427943 RUNX1Q01196 453 aa14.28□□□□□ -0.12
PSPC1-202ENST00000427943 ZNF260Q3ZCT1 412 aa14.28□□□□□ -0.12
PSPC1-202ENST00000427943 UNQ5815/PRO19632Q6UWF5 114 aa14.28□□□□□ -0.12
PSPC1-202ENST00000427943 PPP1R27Q86WC6 154 aa14.28□□□□□ -0.12
PSPC1-202ENST00000427943 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.28□□□□□ -0.12
PSPC1-202ENST00000427943 FCGR1BQ92637 280 aa14.28□□□□□ -0.12
PSPC1-202ENST00000427943 PRR25Q96S07 402 aa14.28□□□□□ -0.12
PSPC1-202ENST00000427943 TSNAXQ99598 290 aaKnown RBP14.28□□□□□ -0.12
PSPC1-202ENST00000427943 RNF5Q99942 180 aa14.28□□□□□ -0.12
PSPC1-202ENST00000427943 SDHAF2Q9NX18 166 aa14.28□□□□□ -0.12
PSPC1-202ENST00000427943 STUB1Q9UNE7 303 aa14.28□□□□□ -0.12
PSPC1-202ENST00000427943 NUBP2Q9Y5Y2 271 aa14.28□□□□□ -0.12
PSPC1-202ENST00000427943 IGKV1D-8A0A087WSZ0 117 aa14.27□□□□□ -0.13
PSPC1-202ENST00000427943 SPDEFO95238 335 aa14.27□□□□□ -0.13
PSPC1-202ENST00000427943 TALDO1P37837 337 aa14.27□□□□□ -0.13
PSPC1-202ENST00000427943 CD69Q07108 199 aa14.27□□□□□ -0.13
PSPC1-202ENST00000427943 TCTEX1D1Q8N7M0 179 aa14.27□□□□□ -0.13
PSPC1-202ENST00000427943 LFNGQ8NES3 379 aa14.27□□□□□ -0.13
PSPC1-202ENST00000427943 GRPEL2Q8TAA5 225 aa14.27□□□□□ -0.13
PSPC1-202ENST00000427943 FLYWCH2Q96CP2 140 aaKnown RBP14.27□□□□□ -0.13
PSPC1-202ENST00000427943 GINS4Q9BRT9 223 aa14.27□□□□□ -0.13
PSPC1-202ENST00000427943 RBM7Q9Y580 266 aaKnown RBP14.27□□□□□ -0.13
PSPC1-202ENST00000427943 NOTOA8MTQ0 251 aa14.26□□□□□ -0.13
PSPC1-202ENST00000427943 FGF9P31371 208 aaPredicted RBP14.26□□□□□ -0.13
PSPC1-202ENST00000427943 ECI1P42126 302 aa14.26□□□□□ -0.13
PSPC1-202ENST00000427943 TMEM267Q0VDI3 215 aaPredicted RBP14.26□□□□□ -0.13
PSPC1-202ENST00000427943 ACTBL2Q562R1 376 aa14.26□□□□□ -0.13
PSPC1-202ENST00000427943 ZNF562Q6V9R5 426 aa14.26□□□□□ -0.13
PSPC1-202ENST00000427943 ARPC1AQ92747 370 aa14.26□□□□□ -0.13
PSPC1-202ENST00000427943 MS4A10Q96PG2 267 aa14.26□□□□□ -0.13
PSPC1-202ENST00000427943 OR51E2Q9H255 320 aa14.26□□□□□ -0.13
PSPC1-202ENST00000427943 ZMAT5Q9UDW3 170 aaKnown RBP14.26□□□□□ -0.13
PSPC1-202ENST00000427943 DAPK2Q9UIK4 370 aa14.26□□□□□ -0.13
PSPC1-202ENST00000427943 SCOCQ9UIL1 159 aa14.26□□□□□ -0.13
PSPC1-202ENST00000427943 RAMP3O60896 148 aa14.25□□□□□ -0.13
PSPC1-202ENST00000427943 IGHV3-11P01762 117 aa14.25□□□□□ -0.13
PSPC1-202ENST00000427943 SLURP1P55000 103 aa14.25□□□□□ -0.13
PSPC1-202ENST00000427943 TPPP2P59282 170 aa14.25□□□□□ -0.13
PSPC1-202ENST00000427943 BVESQ8NE79 360 aa14.25□□□□□ -0.13
PSPC1-202ENST00000427943 DCUN1D4Q92564 292 aa14.25□□□□□ -0.13
PSPC1-202ENST00000427943 HARBI1Q96MB7 349 aa14.25□□□□□ -0.13
PSPC1-202ENST00000427943 B9D2Q9BPU9 175 aa14.25□□□□□ -0.13
PSPC1-202ENST00000427943 SSR3Q9UNL2 185 aa14.25□□□□□ -0.13
PSPC1-202ENST00000427943 RRP15Q9Y3B9 282 aaKnown RBP14.25□□□□□ -0.13
PSPC1-202ENST00000427943 IGHV4OR15-8A0A075B7B6 117 aa14.24□□□□□ -0.13
PSPC1-202ENST00000427943 A0A087WW49 117 aa14.24□□□□□ -0.13
PSPC1-202ENST00000427943 ARPC1BO15143 372 aaKnown RBP14.24□□□□□ -0.13
PSPC1-202ENST00000427943 DIRAS3O95661 229 aa14.24□□□□□ -0.13
PSPC1-202ENST00000427943 IGLV2-23P01705 113 aa14.24□□□□□ -0.13
PSPC1-202ENST00000427943 LGALS1P09382 135 aaKnown RBP14.24□□□□□ -0.13
PSPC1-202ENST00000427943 PJVKQ0ZLH3 352 aa14.24□□□□□ -0.13
PSPC1-202ENST00000427943 FXYD3Q14802 87 aa14.24□□□□□ -0.13
PSPC1-202ENST00000427943 CDNFQ49AH0 187 aa14.24□□□□□ -0.13
PSPC1-202ENST00000427943 PYHIN1Q6K0P9 492 aa14.24□□□□□ -0.13
PSPC1-202ENST00000427943 ZNF773Q6PK81 442 aa14.24□□□□□ -0.13
PSPC1-202ENST00000427943 H1FOOQ8IZA3 346 aaPredicted RBP14.24□□□□□ -0.13
PSPC1-202ENST00000427943 LGALS14Q8TCE9 139 aa14.24□□□□□ -0.13
PSPC1-202ENST00000427943 NUDCD2Q8WVJ2 157 aa14.24□□□□□ -0.13
PSPC1-202ENST00000427943 YTHDF1Q9BYJ9 559 aaKnown RBP14.24□□□□□ -0.13
PSPC1-202ENST00000427943 LINC01619G3V211 115 aa14.23□□□□□ -0.13
PSPC1-202ENST00000427943 J3QRK9 145 aa14.23□□□□□ -0.13
PSPC1-202ENST00000427943 OVOL1O14753 267 aa14.23□□□□□ -0.13
PSPC1-202ENST00000427943 DTYMKP23919 212 aa14.23□□□□□ -0.13
PSPC1-202ENST00000427943 SSBP2P81877 361 aaPredicted RBP14.23□□□□□ -0.13
PSPC1-202ENST00000427943 MXD1Q05195 221 aa14.23□□□□□ -0.13
PSPC1-202ENST00000427943 CBX3Q13185 183 aa14.23□□□□□ -0.13
PSPC1-202ENST00000427943 DCTN2Q13561 401 aaKnown RBP14.23□□□□□ -0.13
PSPC1-202ENST00000427943 AKIRIN2Q53H80 203 aa14.23□□□□□ -0.13
PSPC1-202ENST00000427943 VAX1Q5SQQ9 334 aa14.23□□□□□ -0.13
PSPC1-202ENST00000427943 SFXN4Q6P4A7 337 aa14.23□□□□□ -0.13
PSPC1-202ENST00000427943 Q6ZS49 121 aa14.23□□□□□ -0.13
PSPC1-202ENST00000427943 TPRA1Q86W33 373 aa14.23□□□□□ -0.13
PSPC1-202ENST00000427943 DLX4Q92988 240 aaPredicted RBP14.23□□□□□ -0.13
PSPC1-202ENST00000427943 ST6GALNAC5Q9BVH7 336 aa14.23□□□□□ -0.13
PSPC1-202ENST00000427943 RNF167Q9H6Y7 350 aa14.23□□□□□ -0.13
PSPC1-202ENST00000427943 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.23□□□□□ -0.13
PSPC1-202ENST00000427943 TMEM235A6NFC5 223 aa14.22□□□□□ -0.13
PSPC1-202ENST00000427943 SHOXO15266 292 aa14.22□□□□□ -0.13
PSPC1-202ENST00000427943 CNIH1O95406 144 aa14.22□□□□□ -0.13
PSPC1-202ENST00000427943 TRGV3P03979 118 aa14.22□□□□□ -0.13
PSPC1-202ENST00000427943 CLEC2LP0C7M8 214 aa14.22□□□□□ -0.13
PSPC1-202ENST00000427943 SDC2P34741 201 aa14.22□□□□□ -0.13
PSPC1-202ENST00000427943 ARL6IP1Q15041 203 aa14.22□□□□□ -0.13
PSPC1-202ENST00000427943 SRSF7Q16629 238 aaKnown RBP eCLIP14.22□□□□□ -0.13
PSPC1-202ENST00000427943 RTL8BQ17RB0 113 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms