RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 NOTCH3Q9UM47 2321 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 A0A087WXM4 84 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 TRBV6-7A0A0A0MS04 114 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 TMEM238LA0A1B0GVL6 79 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 G3V318 75 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 AIREO43918 545 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 PROP1O75360 226 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 RBBP9O75884 186 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 DIRAS3O95661 229 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 IGKV1-16P04430 117 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 IGF1P05019 195 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 OR5H8P0DN80 308 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 MC5RP33032 325 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 TGFBR1P36897 503 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 THBS3P49746 956 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 RAB25P57735 213 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 DEFB136Q30KP8 78 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 PDPNQ86YL7 162 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 MRPL41Q8IXM3 137 aaKnown RBP7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 H1FOOQ8IZA3 346 aaPredicted RBP7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 LINC00482Q8N8I6 264 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 ST6GALNAC5Q9BVH7 336 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 TOLLIPQ9H0E2 274 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 GHITMQ9H3K2 345 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 SLC35D1Q9NTN3 355 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 SDHAF2Q9NX18 166 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 METTL1Q9UBP6 276 aaKnown RBP7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 ZNF580Q9UK33 172 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 A3GALT2U3KPV4 340 aa7.22□□□□□ -1.25
RFX3-AS1-202ENST00000427722 TRAV18A0A075B6X5 111 aa7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 TRAV41A0A0B4J266 112 aa7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 J3QRK9 145 aa7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 SSX5O60225 188 aa7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 IGHG4P01861 327 aa7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 ELANEP08246 267 aa7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 SLC6A1P30531 599 aa7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 SCAND1P57086 179 aa7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 RPS16P62249 146 aaKnown RBP7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 LSM3P62310 102 aaKnown RBP7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 Q6ZS49 121 aa7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 RNF152Q8N8N0 203 aa7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 WFDC9Q8NEX5 89 aa7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 YIPF6Q96EC8 236 aa7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 RCC1LQ96I51 464 aaKnown RBP7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 CLCC1Q96S66 551 aa7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 TSNAXQ99598 290 aaKnown RBP7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 NECAP2Q9NVZ3 263 aa7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 FBXO7Q9Y3I1 522 aa7.21□□□□□ -1.26
RFX3-AS1-202ENST00000427722 A0A1W2PN81 502 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 CCL24O00175 119 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 FCN1O00602 326 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 SLC25A17O43808 307 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 SPDEFO95238 335 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 CA2P00918 260 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 FCER2P06734 321 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 NFYAP23511 347 aaPredicted RBP7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 PSMB8P28062 276 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 CHRNA7P36544 502 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 MYCNOSP40205 109 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 CX3CL1P78423 397 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 PITPNAQ00169 270 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 CBX3Q13185 183 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 PSG5Q15238 335 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 SRSF7Q16629 238 aaKnown RBP eCLIP7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 RTL8BQ17RB0 113 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 ZNF260Q3ZCT1 412 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 FOXB2Q5VYV0 432 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 ZNF660Q6AZW8 331 aaPredicted RBP7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 TMEM65Q6PI78 240 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 GRPEL2Q8TAA5 225 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 CASTOR1Q8WTX7 329 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 C4orf3Q8WVX3 66 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 FLYWCH2Q96CP2 140 aaKnown RBP7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 RAX2Q96IS3 184 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 HARBI1Q96MB7 349 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 P2RX4Q99571 388 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 FAM103A1Q9BTL3 118 aaKnown RBP7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 DCSTAMPQ9H295 470 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 KLK15Q9H2R5 256 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 GAB2Q9UQC2 676 aa7.2□□□□□ -1.26
RFX3-AS1-202ENST00000427722 CMYA5Q8N3K9 4069 aa7.19□□□□□ -1.26
RFX3-AS1-202ENST00000427722 DUS4LO95620 317 aaKnown RBP7.19□□□□□ -1.26
RFX3-AS1-202ENST00000427722 CTXN2P0C2S0 81 aa7.19□□□□□ -1.26
RFX3-AS1-202ENST00000427722 PTHLHP12272 177 aa7.19□□□□□ -1.26
RFX3-AS1-202ENST00000427722 PPIFP30405 207 aaKnown RBP7.19□□□□□ -1.26
RFX3-AS1-202ENST00000427722 HOXD3P31249 432 aaPredicted RBP7.19□□□□□ -1.26
RFX3-AS1-202ENST00000427722 ADMP35318 185 aa7.19□□□□□ -1.26
RFX3-AS1-202ENST00000427722 CDX1P47902 265 aaPredicted RBP7.19□□□□□ -1.26
RFX3-AS1-202ENST00000427722 GNB1P62873 340 aa7.19□□□□□ -1.26
RFX3-AS1-202ENST00000427722 REC114Q7Z4M0 266 aa7.19□□□□□ -1.26
RFX3-AS1-202ENST00000427722 BVESQ8NE79 360 aa7.19□□□□□ -1.26
RFX3-AS1-202ENST00000427722 MRAPQ8TCY5 172 aa7.19□□□□□ -1.26
RFX3-AS1-202ENST00000427722 MYOZ3Q8TDC0 251 aa7.19□□□□□ -1.26
RFX3-AS1-202ENST00000427722 ARPC1AQ92747 370 aa7.19□□□□□ -1.26
RFX3-AS1-202ENST00000427722 DPF1Q92782 380 aa7.19□□□□□ -1.26
RFX3-AS1-202ENST00000427722 OR5B12Q96R08 314 aa7.19□□□□□ -1.26
RFX3-AS1-202ENST00000427722 RNF5Q99942 180 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms