RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 GPHA2Q96T91 129 aa7.81□□□□□ -1.16
HMGB4-201ENST00000425537 FBXL17Q9UF56 701 aa7.81□□□□□ -1.16
HMGB4-201ENST00000425537 AUP1Q9Y679 476 aa7.81□□□□□ -1.16
HMGB4-201ENST00000425537 RAI1Q7Z5J4 1906 aaPredicted RBP7.81□□□□□ -1.16
HMGB4-201ENST00000425537 HCFC1P51610 2035 aa7.81□□□□□ -1.16
HMGB4-201ENST00000425537 RELNP78509 3460 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 C17orf98A8MV24 154 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 SIAH2O43255 324 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 CHST1O43916 411 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 HRASP01112 189 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 KRASP01116 189 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 IGKV1-39P01597 117 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 IGKV1-5P01602 117 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 RBP4P02753 201 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 IGKV1D-39P04432 117 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 NMBP08949 121 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 NQO2P16083 231 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 RAB5CP51148 216 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 POLR2GP62487 172 aaKnown RBP eCLIP7.8□□□□□ -1.16
HMGB4-201ENST00000425537 HBG1P69891 147 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 HBG2P69892 147 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 RPP30P78346 268 aaKnown RBP7.8□□□□□ -1.16
HMGB4-201ENST00000425537 EWSR1Q01844 656 aaKnown RBP eCLIP7.8□□□□□ -1.16
HMGB4-201ENST00000425537 ZNF816Q0VGE8 651 aaPredicted RBP7.8□□□□□ -1.16
HMGB4-201ENST00000425537 RTL8BQ17RB0 113 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 TMEM155Q4W5P6 130 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 CXorf66Q5JRM2 361 aaPredicted RBP7.8□□□□□ -1.16
HMGB4-201ENST00000425537 FAM71F2Q6NXP2 309 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 BTNL3Q6UXE8 466 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 SLC25A48Q6ZT89 311 aaKnown RBP7.8□□□□□ -1.16
HMGB4-201ENST00000425537 OR1S2Q8NGQ3 325 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 TNFRSF14Q92956 283 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 R3HDM4Q96D70 268 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 NEIL1Q96FI4 390 aaPredicted RBP7.8□□□□□ -1.16
HMGB4-201ENST00000425537 SMIM8Q96KF7 97 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 CITED4Q96RK1 184 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 IFI27L2Q9H2X8 130 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 CYTL1Q9NRR1 136 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 DCAF16Q9NXF7 216 aa7.8□□□□□ -1.16
HMGB4-201ENST00000425537 DIDO1Q9BTC0 2240 aaKnown RBP7.8□□□□□ -1.16
HMGB4-201ENST00000425537 DSCAMO60469 2012 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 ANKHD1Q8IWZ3 2542 aaKnown RBP7.79□□□□□ -1.16
HMGB4-201ENST00000425537 CACNA1DQ01668 2161 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 MARCH11A6NNE9 402 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 FCGR3BO75015 233 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 RBMXL2O75526 392 aaKnown RBP7.79□□□□□ -1.16
HMGB4-201ENST00000425537 S1PR2O95136 353 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 IFNA5P01569 189 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 IGHV2-70P01814 119 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 APOA2P02652 100 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 SEC11BP0C7V7 166 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 OMGP23515 440 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 SULT1A1P50225 295 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 PRRX1P54821 245 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 RPL30P62888 115 aaKnown RBP7.79□□□□□ -1.16
HMGB4-201ENST00000425537 TNFRSF9Q07011 255 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 CT45A1Q5HYN5 189 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 PRAMEF5Q5TYX0 476 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 TMEM200BQ69YZ2 307 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 RPL7L1Q6DKI1 246 aaKnown RBP7.79□□□□□ -1.16
HMGB4-201ENST00000425537 C11orf71Q6IPW1 123 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 TGIF2LYQ8IUE0 185 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 LYG1Q8N1E2 194 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 LINC00311Q8N616 119 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 TMEM252Q8N6L7 170 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 ZNF439Q8NDP4 499 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 CT45A3Q8NHU0 189 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 GNPNAT1Q96EK6 184 aaPredicted RBP7.79□□□□□ -1.16
HMGB4-201ENST00000425537 TSNAXQ99598 290 aaKnown RBP7.79□□□□□ -1.16
HMGB4-201ENST00000425537 MAGT1Q9H0U3 335 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 C11orf1Q9H5F2 150 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 CHODLQ9H9P2 273 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 C19orf12Q9NSK7 152 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 PSENENQ9NZ42 101 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 HSPB7Q9UBY9 170 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 DSCAML1Q8TD84 2053 aa7.79□□□□□ -1.16
HMGB4-201ENST00000425537 A0A0G2JRQ6 117 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 FAM24AA6NFZ4 105 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 LINC00473A8K010 186 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 LEUTXA8MZ59 168 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 FGF16O43320 207 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 KCNAB3O43448 404 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 P0C879 139 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 G6PCP35575 357 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 UBE2KP61086 200 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 ATP6V1FQ16864 119 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 OR2B11Q5JQS5 317 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 NCR3LG1Q68D85 454 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 ZNF787Q6DD87 383 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 DUX4L9Q6RFH8 374 aaPredicted RBP7.78□□□□□ -1.16
HMGB4-201ENST00000425537 LYPD2Q6UXB3 125 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 TCF23Q7RTU1 214 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 HSD17B13Q7Z5P4 300 aaPredicted RBP7.78□□□□□ -1.16
HMGB4-201ENST00000425537 EIF4E3Q8N5X7 224 aaKnown RBP7.78□□□□□ -1.16
HMGB4-201ENST00000425537 OR4A16Q8NH70 328 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 OR9G1Q8NH87 305 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 TMED6Q8WW62 240 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 TMEM186Q96B77 213 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 C5orf30Q96GV9 206 aa7.78□□□□□ -1.16
HMGB4-201ENST00000425537 GINS3Q9BRX5 216 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms