RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 H2BFWTQ7Z2G1 175 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 COMMD1Q8N668 190 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 SNRNP40Q96DI7 357 aaKnown RBP9.63□□□□□ -0.87
UBR4-207ENST00000425413 COA4Q9NYJ1 87 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 PTPRQQ9UMZ3 2332 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 CEBPZOSA8MTT3 80 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 M0R1X1 148 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 MEOX2P50222 304 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 CCL8P80075 99 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 SLC38A11Q08AI6 406 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 EIF2S3LQ2VIR3 472 aaKnown RBP9.63□□□□□ -0.87
UBR4-207ENST00000425413 SSX7Q7RTT5 188 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 PRR7Q8TB68 274 aa9.63□□□□□ -0.87
UBR4-207ENST00000425413 MKRN2OSH3BPM6 223 aa9.62□□□□□ -0.87
UBR4-207ENST00000425413 C15orf65H3BRN8 121 aa9.62□□□□□ -0.87
UBR4-207ENST00000425413 CRYABP02511 175 aaKnown RBP9.62□□□□□ -0.87
UBR4-207ENST00000425413 ACAA1P09110 424 aaPredicted RBP9.62□□□□□ -0.87
UBR4-207ENST00000425413 SLC25A6P12236 298 aa9.62□□□□□ -0.87
UBR4-207ENST00000425413 DEFA4P12838 97 aa9.62□□□□□ -0.87
UBR4-207ENST00000425413 ERVFRD-1P60508 538 aa9.62□□□□□ -0.87
UBR4-207ENST00000425413 PRR30Q53SZ7 412 aaPredicted RBP9.62□□□□□ -0.87
UBR4-207ENST00000425413 SLC16A13Q7RTY0 426 aa9.62□□□□□ -0.87
UBR4-207ENST00000425413 CYB561D1Q8N8Q1 229 aa9.62□□□□□ -0.87
UBR4-207ENST00000425413 ZNF727A8MUV8 499 aa9.62□□□□□ -0.87
UBR4-207ENST00000425413 IFNL4K9M1U5 179 aa9.62□□□□□ -0.87
UBR4-207ENST00000425413 SLC31A2O15432 143 aa9.62□□□□□ -0.87
UBR4-207ENST00000425413 ZZEF1O43149 2961 aa9.62□□□□□ -0.87
UBR4-207ENST00000425413 PROP1O75360 226 aa9.62□□□□□ -0.87
UBR4-207ENST00000425413 MT-ND4LP03901 98 aa9.62□□□□□ -0.87
UBR4-207ENST00000425413 ZNF134P52741 427 aa9.62□□□□□ -0.87
UBR4-207ENST00000425413 HBG1P69891 147 aa9.62□□□□□ -0.87
UBR4-207ENST00000425413 HBG2P69892 147 aa9.62□□□□□ -0.87
UBR4-207ENST00000425413 ASCL5Q7RTU5 278 aa9.62□□□□□ -0.87
UBR4-207ENST00000425413 NANPQ8TBE9 248 aa9.62□□□□□ -0.87
UBR4-207ENST00000425413 ZNF665Q9H7R5 613 aa9.62□□□□□ -0.87
UBR4-207ENST00000425413 LRRC30A6NM36 301 aa9.61□□□□□ -0.87
UBR4-207ENST00000425413 GLRXP35754 106 aa9.61□□□□□ -0.87
UBR4-207ENST00000425413 CD200P41217 278 aa9.61□□□□□ -0.87
UBR4-207ENST00000425413 MSMO1Q15800 293 aa9.61□□□□□ -0.87
UBR4-207ENST00000425413 LFNGQ8NES3 379 aa9.61□□□□□ -0.87
UBR4-207ENST00000425413 LURAP1Q96LR2 239 aa9.61□□□□□ -0.87
UBR4-207ENST00000425413 CCL13Q99616 98 aa9.61□□□□□ -0.87
UBR4-207ENST00000425413 AGMATQ9BSE5 352 aa9.61□□□□□ -0.87
UBR4-207ENST00000425413 SPTBN4Q9H254 2564 aa9.61□□□□□ -0.87
UBR4-207ENST00000425413 MARCH11A6NNE9 402 aa9.61□□□□□ -0.87
UBR4-207ENST00000425413 CLDN14O95500 239 aa9.61□□□□□ -0.87
UBR4-207ENST00000425413 IFNA17P01571 189 aa9.61□□□□□ -0.87
UBR4-207ENST00000425413 TNFAIP6P98066 277 aaPredicted RBP9.61□□□□□ -0.87
UBR4-207ENST00000425413 TLE4Q04727 773 aa9.61□□□□□ -0.87
UBR4-207ENST00000425413 DTD1Q8TEA8 209 aa9.61□□□□□ -0.87
UBR4-207ENST00000425413 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.61□□□□□ -0.87
UBR4-207ENST00000425413 URGCP-MRPS24S4R325 110 aa9.61□□□□□ -0.87
UBR4-207ENST00000425413 A8MXE2 369 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 OR2C1O95371 312 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 GYPAP02724 150 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 NQO2P16083 231 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 RAB5AP20339 215 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 CCKARP32238 428 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 NKX6-1P78426 367 aaPredicted RBP9.6□□□□□ -0.87
UBR4-207ENST00000425413 FABP9Q0Z7S8 132 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 ZNF726P1Q15940 193 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 DOLPP1Q86YN1 238 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 FAM216BQ8N7L0 139 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 FAM57AQ8TBR7 257 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 QTRT1Q9BXR0 403 aaKnown RBP9.6□□□□□ -0.87
UBR4-207ENST00000425413 ZNRD1Q9P1U0 126 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 A0A0G2JNJ9 132 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 MGST3O14880 152 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 CD40P25942 277 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 GNG10P50151 68 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 RAB2AP61019 212 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 MZT1Q08AG7 82 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 ICAM4Q14773 271 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 ZNF561Q8N587 486 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 R3HDM4Q96D70 268 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 Q9UFV3 132 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 DSCAMO60469 2012 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 SCAF4O95104 1147 aaKnown RBP9.6□□□□□ -0.87
UBR4-207ENST00000425413 IFNA4P05014 189 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 OR9G9P0C7N8 305 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 TUBG1P23258 451 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 TIMP3P35625 211 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 SELENOVP59797 346 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 RAB11AP62491 216 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 EIF4EBP1Q13541 118 aaPredicted RBP9.6□□□□□ -0.87
UBR4-207ENST00000425413 MORN2Q502X0 79 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 ZNF787Q6DD87 383 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 C1orf229Q6ZS94 237 aaPredicted RBP9.6□□□□□ -0.87
UBR4-207ENST00000425413 FAM90A1Q86YD7 464 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 RCC1LQ96I51 464 aaKnown RBP9.6□□□□□ -0.87
UBR4-207ENST00000425413 SNX22Q96L94 193 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 GCM1Q9NP62 436 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 TUBG2Q9NRH3 451 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 KIAA1456Q9P272 454 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 HSPB7Q9UBY9 170 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 ABCA4P78363 2273 aa9.6□□□□□ -0.87
UBR4-207ENST00000425413 YLPM1P49750 1951 aaKnown RBP9.59□□□□□ -0.87
UBR4-207ENST00000425413 H3BQ15 152 aa9.59□□□□□ -0.87
UBR4-207ENST00000425413 PRRG2O14669 202 aa9.59□□□□□ -0.87
UBR4-207ENST00000425413 IGHV1-46P01743 117 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms