RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 XRCC3O43542 346 aa14□□□□□ -0.17
IGHV3-47-201ENST00000425060 IGLV2-23P01705 113 aa14□□□□□ -0.17
IGHV3-47-201ENST00000425060 HLA-DQB1P01920 261 aa14□□□□□ -0.17
IGHV3-47-201ENST00000425060 OR5H8P0DN80 308 aa14□□□□□ -0.17
IGHV3-47-201ENST00000425060 EGR2P11161 476 aaPredicted RBP14□□□□□ -0.17
IGHV3-47-201ENST00000425060 THBS3P49746 956 aa14□□□□□ -0.17
IGHV3-47-201ENST00000425060 CRIP2P52943 208 aaPredicted RBP14□□□□□ -0.17
IGHV3-47-201ENST00000425060 RPS16P62249 146 aaKnown RBP14□□□□□ -0.17
IGHV3-47-201ENST00000425060 CX3CL1P78423 397 aa14□□□□□ -0.17
IGHV3-47-201ENST00000425060 C8orf86Q6ZUL3 223 aa14□□□□□ -0.17
IGHV3-47-201ENST00000425060 HOGA1Q86XE5 327 aa14□□□□□ -0.17
IGHV3-47-201ENST00000425060 GVQW1Q8N7I0 195 aa14□□□□□ -0.17
IGHV3-47-201ENST00000425060 MYOZ3Q8TDC0 251 aa14□□□□□ -0.17
IGHV3-47-201ENST00000425060 DDB2Q92466 427 aa14□□□□□ -0.17
IGHV3-47-201ENST00000425060 FLYWCH2Q96CP2 140 aaKnown RBP14□□□□□ -0.17
IGHV3-47-201ENST00000425060 SLC35D1Q9NTN3 355 aa14□□□□□ -0.17
IGHV3-47-201ENST00000425060 OR2W1Q9Y3N9 320 aa14□□□□□ -0.17
IGHV3-47-201ENST00000425060 WSB1Q9Y6I7 421 aa14□□□□□ -0.17
IGHV3-47-201ENST00000425060 TUSC2O75896 110 aa13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 SPDEFO95238 335 aa13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 IGLV1-40P01703 118 aa13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 APOA2P02652 100 aa13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 PF4P02776 101 aa13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 PTHLHP12272 177 aa13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 CD33P20138 364 aa13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 NFYAP23511 347 aaPredicted RBP13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 DUTP33316 252 aaKnown RBP13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 CDX1P47902 265 aaPredicted RBP13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 VBP1P61758 197 aa13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 TAGLNQ01995 201 aaKnown RBP13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 KIAA0141Q14154 515 aaPredicted RBP13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 CXorf66Q5JRM2 361 aaPredicted RBP13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 UBE2NLQ5JXB2 153 aa13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 ZNF695Q8IW36 515 aa13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 MRPL41Q8IXM3 137 aaKnown RBP13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 LINC00482Q8N8I6 264 aa13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 MINDY2Q8NBR6 621 aa13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 P2RX4Q99571 388 aa13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 TSNAXQ99598 290 aaKnown RBP13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 PARP11Q9NR21 331 aa13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 METTL1Q9UBP6 276 aaKnown RBP13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 RBM7Q9Y580 266 aaKnown RBP13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 NUBP2Q9Y5Y2 271 aa13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 DNAH3Q8TD57 4116 aa13.99□□□□□ -0.17
IGHV3-47-201ENST00000425060 TRAV41A0A0B4J266 112 aa13.98□□□□□ -0.17
IGHV3-47-201ENST00000425060 IGKV1D-13A0A0B4J2D9 117 aa13.98□□□□□ -0.17
IGHV3-47-201ENST00000425060 LINC00473A8K010 186 aa13.98□□□□□ -0.17
IGHV3-47-201ENST00000425060 IGLV2-14P01704 120 aa13.98□□□□□ -0.17
IGHV3-47-201ENST00000425060 CRYGBP07316 175 aa13.98□□□□□ -0.17
IGHV3-47-201ENST00000425060 IGKV1-13P0DP09 117 aa13.98□□□□□ -0.17
IGHV3-47-201ENST00000425060 MYCNOSP40205 109 aa13.98□□□□□ -0.17
IGHV3-47-201ENST00000425060 LUMP51884 338 aaPredicted RBP13.98□□□□□ -0.17
IGHV3-47-201ENST00000425060 TMEM177Q53S58 311 aa13.98□□□□□ -0.17
IGHV3-47-201ENST00000425060 ANKRD13BQ86YJ7 626 aa13.98□□□□□ -0.17
IGHV3-47-201ENST00000425060 KLHL30-AS1Q8NEE0 82 aa13.98□□□□□ -0.17
IGHV3-47-201ENST00000425060 BEST4Q8NFU0 473 aa13.98□□□□□ -0.17
IGHV3-47-201ENST00000425060 KCTD12Q96CX2 325 aaKnown RBP13.98□□□□□ -0.17
IGHV3-47-201ENST00000425060 S100A16Q96FQ6 103 aaKnown RBP13.98□□□□□ -0.17
IGHV3-47-201ENST00000425060 NAA50Q9GZZ1 169 aaKnown RBP13.98□□□□□ -0.17
IGHV3-47-201ENST00000425060 PRKDCP78527 4128 aaKnown RBP13.98□□□□□ -0.17
IGHV3-47-201ENST00000425060 SRRM4A7MD48 611 aaKnown RBP13.97□□□□□ -0.17
IGHV3-47-201ENST00000425060 IGLL1P15814 213 aa13.97□□□□□ -0.17
IGHV3-47-201ENST00000425060 LGALS7P47929 136 aa13.97□□□□□ -0.17
IGHV3-47-201ENST00000425060 PLGLAQ15195 96 aa13.97□□□□□ -0.17
IGHV3-47-201ENST00000425060 CTF1Q16619 201 aa13.97□□□□□ -0.17
IGHV3-47-201ENST00000425060 ZNF562Q6V9R5 426 aa13.97□□□□□ -0.17
IGHV3-47-201ENST00000425060 ZNF645Q8N7E2 425 aa13.97□□□□□ -0.17
IGHV3-47-201ENST00000425060 SAMD12Q8N8I0 201 aa13.97□□□□□ -0.17
IGHV3-47-201ENST00000425060 BVESQ8NE79 360 aa13.97□□□□□ -0.17
IGHV3-47-201ENST00000425060 ADTRPQ96IZ2 230 aa13.97□□□□□ -0.17
IGHV3-47-201ENST00000425060 KLK15Q9H2R5 256 aa13.97□□□□□ -0.17
IGHV3-47-201ENST00000425060 TPSG1Q9NRR2 321 aa13.97□□□□□ -0.17
IGHV3-47-201ENST00000425060 NUDT19A8MXV4 375 aa13.96□□□□□ -0.17
IGHV3-47-201ENST00000425060 J3QRK9 145 aa13.96□□□□□ -0.17
IGHV3-47-201ENST00000425060 SOX15O60248 233 aa13.96□□□□□ -0.17
IGHV3-47-201ENST00000425060 GABARAPO95166 117 aa13.96□□□□□ -0.17
IGHV3-47-201ENST00000425060 CA2P00918 260 aa13.96□□□□□ -0.17
IGHV3-47-201ENST00000425060 RRASP10301 218 aa13.96□□□□□ -0.17
IGHV3-47-201ENST00000425060 SSBP2P81877 361 aaPredicted RBP13.96□□□□□ -0.17
IGHV3-47-201ENST00000425060 EIF4EBP1Q13541 118 aaPredicted RBP13.96□□□□□ -0.17
IGHV3-47-201ENST00000425060 SNAPC3Q92966 411 aa13.96□□□□□ -0.17
IGHV3-47-201ENST00000425060 RCC1LQ96I51 464 aaKnown RBP13.96□□□□□ -0.17
IGHV3-47-201ENST00000425060 RAX2Q96IS3 184 aa13.96□□□□□ -0.17
IGHV3-47-201ENST00000425060 CMTM3Q96MX0 182 aa13.96□□□□□ -0.17
IGHV3-47-201ENST00000425060 CLCC1Q96S66 551 aa13.96□□□□□ -0.17
IGHV3-47-201ENST00000425060 RBMX2Q9Y388 322 aaKnown RBP13.96□□□□□ -0.17
IGHV3-47-201ENST00000425060 ARPC1BO15143 372 aaKnown RBP13.95□□□□□ -0.18
IGHV3-47-201ENST00000425060 SLC25A17O43808 307 aa13.95□□□□□ -0.18
IGHV3-47-201ENST00000425060 SLC22A5O76082 557 aa13.95□□□□□ -0.18
IGHV3-47-201ENST00000425060 CBX5P45973 191 aa13.95□□□□□ -0.18
IGHV3-47-201ENST00000425060 ALDH3B2P48448 385 aa13.95□□□□□ -0.18
IGHV3-47-201ENST00000425060 TAS2R20P59543 309 aa13.95□□□□□ -0.18
IGHV3-47-201ENST00000425060 MRGPRG-AS1Q2M3A8 158 aa13.95□□□□□ -0.18
IGHV3-47-201ENST00000425060 PPP1R27Q86WC6 154 aa13.95□□□□□ -0.18
IGHV3-47-201ENST00000425060 ZNF491Q8N8L2 437 aa13.95□□□□□ -0.18
IGHV3-47-201ENST00000425060 ANAPC10Q9UM13 185 aa13.95□□□□□ -0.18
IGHV3-47-201ENST00000425060 EIF4EP06730 217 aaKnown RBP13.94□□□□□ -0.18
IGHV3-47-201ENST00000425060 RAB9AP51151 201 aa13.94□□□□□ -0.18
IGHV3-47-201ENST00000425060 RPL30P62888 115 aaKnown RBP13.94□□□□□ -0.18
IGHV3-47-201ENST00000425060 RTL8BQ17RB0 113 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms