RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 ZNF524Q96C55 264 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 ISOC1Q96CN7 298 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 MS4A6EQ96DS6 147 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 ADAT3Q96EY9 351 aaPredicted RBP2.76□□□□□ -1.97
SF3B1-205ENST00000424674 F2RL3Q96RI0 385 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 ZNF382Q96SR6 550 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 HSD17B10Q99714 261 aaKnown RBP2.76□□□□□ -1.97
SF3B1-205ENST00000424674 SAMD10Q9BYL1 202 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 POPDC3Q9HBV1 291 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 KLK13Q9UKR3 277 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 TBX21Q9UL17 535 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 FAM135BQ49AJ0 1406 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 VPS8Q8N3P4 1428 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 VWA8A3KMH1 1905 aa2.76□□□□□ -1.97
SF3B1-205ENST00000424674 TMEM131Q92545 1883 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 VIRMAQ69YN4 1812 aaKnown RBP2.75□□□□□ -1.97
SF3B1-205ENST00000424674 NFASCO94856 1347 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 IGLV8-61A0A075B6I0 122 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 TRAV19A0A0A6YYK7 116 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 IGHV3-74A0A0B4J1X5 117 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 CCL15-CCL14A0A0B4J2E2 113 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 DUXBA0A1W2PPF3 345 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 C5orf63A6NC05 138 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 C9JQL5 133 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 M0R2Z0 102 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 TP53I11O14683 189 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 MRASO14807 208 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 ZNF207O43670 478 aaKnown RBP2.75□□□□□ -1.97
SF3B1-205ENST00000424674 GSTZ1O43708 216 aaPredicted RBP2.75□□□□□ -1.97
SF3B1-205ENST00000424674 TRAF3IP2O43734 574 aaPredicted RBP2.75□□□□□ -1.97
SF3B1-205ENST00000424674 DEDDO75618 318 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 POP7O75817 140 aaKnown RBP2.75□□□□□ -1.97
SF3B1-205ENST00000424674 IGF2P01344 180 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 SCTP09683 121 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 RPL7P18124 248 aaKnown RBP2.75□□□□□ -1.97
SF3B1-205ENST00000424674 RPS3P23396 243 aaKnown RBP eCLIP2.75□□□□□ -1.979e-15■■■■■ 29.1
SF3B1-205ENST00000424674 IL3RAP26951 378 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 CMPK1P30085 196 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 POLR2IP36954 125 aaKnown RBP2.75□□□□□ -1.97
SF3B1-205ENST00000424674 TAS2R30P59541 319 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 PPP1CAP62136 330 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 HERVK_113P63121 156 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 CCL15Q16663 113 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 ZFP69Q49AA0 526 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 ADAMTSL4-AS1Q5T5F5 129 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 ZNF773Q6PK81 442 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 DEFB128Q7Z7B8 93 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 CROCCP2Q86T23 111 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 TMEM75Q8N9X5 138 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 TSTD1Q8NFU3 115 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 OR52P1PQ8NH57 321 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 ARL11Q969Q4 196 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 GNPNAT1Q96EK6 184 aaPredicted RBP2.75□□□□□ -1.97
SF3B1-205ENST00000424674 OR2H1Q9GZK4 316 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 IMUPQ9GZP8 106 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 GTSF1LQ9H1H1 148 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 OR2D2Q9H210 308 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 KCNIP2Q9NS61 270 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 TVP23BQ9NYZ1 205 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 ERG28Q9UKR5 140 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 ANAPC10Q9UM13 185 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 FER1L5A0AVI2 2057 aa2.75□□□□□ -1.97
SF3B1-205ENST00000424674 A0A087WUU8 490 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 TRAV4A0A0B4J268 109 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 PMS2P5A8MQ11 134 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 A8MXK9 166 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 SRSF10O75494 262 aaKnown RBP2.74□□□□□ -1.97
SF3B1-205ENST00000424674 SRIP30626 198 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 PPP1CCP36873 323 aaKnown RBP2.74□□□□□ -1.97
SF3B1-205ENST00000424674 ATP5G3P48201 142 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 GABARAPL2P60520 117 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 NCS1P62166 190 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 HOXC5Q00444 222 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 REG3AQ06141 175 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 PLCXD2Q0VAA5 305 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 MMDQ15546 238 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 CST6Q15828 149 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 TMEM69Q5SWH9 247 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 STPG1Q5TH74 334 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 GLT8D1Q68CQ7 371 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 PRSS54Q6PEW0 395 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 Q6Q795 121 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 PRNTQ86SH4 94 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 BAP18Q8IXM2 172 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 OR1J4Q8NGS1 313 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 OR13C8Q8NGS7 320 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 OR4C6Q8NH72 309 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 ITLN1Q8WWA0 313 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 ACOT12Q8WYK0 555 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 TMEM190Q8WZ59 177 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 PHYHIPLQ96FC7 376 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 ABHD14BQ96IU4 210 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 OR2A5Q96R48 311 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 TP53RKQ96S44 253 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 TIMM17AQ99595 171 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 NRIP2Q9BQI9 281 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 ZNF471Q9BX82 626 aaPredicted RBP2.74□□□□□ -1.97
SF3B1-205ENST00000424674 LINC00470Q9BZP3 86 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 YIPF3Q9GZM5 350 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 PDFQ9HBH1 243 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms