RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 ZPLD1Q8TCW7 415 aa8.4□□□□□ -1.06
USP54-205ENST00000424265 BLNKQ8WV28 456 aa8.4□□□□□ -1.06
USP54-205ENST00000424265 PECRQ9BY49 303 aa8.4□□□□□ -1.06
USP54-205ENST00000424265 MRPL16Q9NX20 251 aaKnown RBP8.4□□□□□ -1.06
USP54-205ENST00000424265 TSSC4Q9Y5U2 329 aaPredicted RBP8.4□□□□□ -1.06
USP54-205ENST00000424265 GAGE12HA6NDE8 117 aa8.4□□□□□ -1.06
USP54-205ENST00000424265 F2RP25116 425 aa8.4□□□□□ -1.06
USP54-205ENST00000424265 EFNB2P52799 333 aa8.4□□□□□ -1.06
USP54-205ENST00000424265 CALHM1Q8IU99 346 aa8.4□□□□□ -1.06
USP54-205ENST00000424265 NPEPL1Q8NDH3 523 aa8.4□□□□□ -1.06
USP54-205ENST00000424265 TSSK2Q96PF2 358 aa8.4□□□□□ -1.06
USP54-205ENST00000424265 HSPB8Q9UJY1 196 aa8.4□□□□□ -1.06
USP54-205ENST00000424265 ASCC3Q8N3C0 2202 aaKnown RBP8.4□□□□□ -1.07
USP54-205ENST00000424265 FABP2P12104 132 aa8.4□□□□□ -1.07
USP54-205ENST00000424265 KITLGP21583 273 aa8.4□□□□□ -1.07
USP54-205ENST00000424265 ID1P41134 155 aa8.4□□□□□ -1.07
USP54-205ENST00000424265 PCK2Q16822 640 aa8.4□□□□□ -1.07
USP54-205ENST00000424265 CD300EQ496F6 205 aaPredicted RBP8.4□□□□□ -1.07
USP54-205ENST00000424265 ASPHD2Q6ICH7 369 aa8.4□□□□□ -1.07
USP54-205ENST00000424265 Q6ZWC4 215 aa8.4□□□□□ -1.07
USP54-205ENST00000424265 CDC20BQ86Y33 519 aa8.4□□□□□ -1.07
USP54-205ENST00000424265 WDYHV1Q96HA8 205 aa8.4□□□□□ -1.07
USP54-205ENST00000424265 FAM110AQ9BQ89 295 aa8.4□□□□□ -1.07
USP54-205ENST00000424265 AHCTF1Q8WYP5 2266 aa8.4□□□□□ -1.07
USP54-205ENST00000424265 LOC102723971A0A1B0GUV8 181 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 IGLC7A0M8Q6 106 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 OR11H12B2RN74 326 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 M0R135 149 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 SIVA1O15304 175 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 S1PR2O95136 353 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 BCL2P10415 239 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 GAGE5Q13069 117 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 GAGE6Q13070 117 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 OR11H1Q8NG94 326 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 OR11H2Q8NH07 326 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 APOBEC3DQ96AK3 386 aaPredicted RBP8.39□□□□□ -1.07
USP54-205ENST00000424265 ZNF799Q96GE5 643 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 WFDC1Q9HC57 220 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 EP300Q09472 2414 aaPredicted RBP8.39□□□□□ -1.07
USP54-205ENST00000424265 A4D1N5 150 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 SERF1AO75920 110 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 MDH2P40926 338 aaKnown RBP8.39□□□□□ -1.07
USP54-205ENST00000424265 SLC25A34Q6PIV7 304 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 LINC00114Q6XXX2 140 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 PLPP7Q8NBV4 271 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 SFXN3Q9BWM7 321 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 ZNF835Q9Y2P0 537 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 GPR179Q6PRD1 2367 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 IGHV2-26A0A0B4J1V2 119 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 FCN1O00602 326 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 SMIM17P0DL12 118 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 GNG4P50150 75 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 Q56UQ5 140 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 THSD4Q6ZMP0 1018 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 POC1AQ8NBT0 407 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 KCNK15Q9H427 330 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 CISD1Q9NZ45 108 aaKnown RBP8.39□□□□□ -1.07
USP54-205ENST00000424265 RAXQ9Y2V3 346 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 ASXL3Q9C0F0 2248 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 A0A1B0GTH9 108 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 K7ENP7 123 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 MSTNO14793 375 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 ANKRD55Q3KP44 614 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 INO80CQ6PI98 192 aaPredicted RBP8.39□□□□□ -1.07
USP54-205ENST00000424265 FAM214BQ7L5A3 538 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 LINC00346Q8IVM7 164 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 OR4F5Q8NH21 305 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 ZNF519Q8TB69 540 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 SIGLEC12Q96PQ1 595 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 OR4F4Q96R69 305 aa8.39□□□□□ -1.07
USP54-205ENST00000424265 MRPS28Q9Y2Q9 187 aaKnown RBP8.39□□□□□ -1.07
USP54-205ENST00000424265 C7orf71A4D174 169 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 HELTA6NFD8 242 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 SPINK2P20155 84 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 LCN2P80188 198 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 SRSF7Q16629 238 aaKnown RBP eCLIP8.38□□□□□ -1.07
USP54-205ENST00000424265 MPV17L2Q567V2 206 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 IGFL3Q6UXB1 125 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 OR1F12Q8NHA8 337 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 RAB1CQ92928 201 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 ATP6V0CP27449 155 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 UQCRFS1P47985 274 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 GGTLC2Q14390 218 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 TBR1Q16650 682 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 GLYATL3Q5SZD4 288 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 LINC00470Q9BZP3 86 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 BANF2Q9H503 90 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 SPCS1Q9Y6A9 102 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 NEURL1O76050 574 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 ZIC2O95409 532 aaPredicted RBP8.38□□□□□ -1.07
USP54-205ENST00000424265 CA1P00915 261 aaPredicted RBP8.38□□□□□ -1.07
USP54-205ENST00000424265 HTR1DP28221 377 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 RPS4XP62701 263 aaKnown RBP8.38□□□□□ -1.07
USP54-205ENST00000424265 CCL20P78556 96 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 OR13G1Q8NGZ3 307 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 ABHD17AQ96GS6 310 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 DYNLRB1Q9NP97 96 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 GPR84Q9NQS5 396 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 DKK4Q9UBT3 224 aa8.38□□□□□ -1.07
USP54-205ENST00000424265 PGPEP1LA6NFU8 196 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms