RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 UBE2UQ5VVX9 321 aa19.8■□□□□ 0.76
SMDT1-202ENST00000422252 PPP1R27Q86WC6 154 aa19.8■□□□□ 0.76
SMDT1-202ENST00000422252 OR10J5Q8NHC4 309 aa19.8■□□□□ 0.76
SMDT1-202ENST00000422252 SCOCQ9UIL1 159 aa19.8■□□□□ 0.76
SMDT1-202ENST00000422252 TRBV6-7A0A0A0MS04 114 aa19.79■□□□□ 0.76
SMDT1-202ENST00000422252 METTL21EPA6NDL7 271 aa19.79■□□□□ 0.76
SMDT1-202ENST00000422252 DIRAS3O95661 229 aa19.79■□□□□ 0.76
SMDT1-202ENST00000422252 CA2P00918 260 aa19.79■□□□□ 0.76
SMDT1-202ENST00000422252 ZNF260Q3ZCT1 412 aa19.79■□□□□ 0.76
SMDT1-202ENST00000422252 VAX1Q5SQQ9 334 aa19.79■□□□□ 0.76
SMDT1-202ENST00000422252 ZNF562Q6V9R5 426 aa19.79■□□□□ 0.76
SMDT1-202ENST00000422252 NR2C2APQ86WQ0 139 aa19.79■□□□□ 0.76
SMDT1-202ENST00000422252 MAFIPQ8WZ33 124 aa19.79■□□□□ 0.76
SMDT1-202ENST00000422252 FLYWCH2Q96CP2 140 aaKnown RBP19.79■□□□□ 0.76
SMDT1-202ENST00000422252 FAM103A1Q9BTL3 118 aaKnown RBP19.79■□□□□ 0.76
SMDT1-202ENST00000422252 ZNF230Q9UIE0 474 aaPredicted RBP19.79■□□□□ 0.76
SMDT1-202ENST00000422252 OR8U9P0C7N5 309 aa19.78■□□□□ 0.76
SMDT1-202ENST00000422252 AKIRIN2Q53H80 203 aa19.78■□□□□ 0.76
SMDT1-202ENST00000422252 PYHIN1Q6K0P9 492 aa19.78■□□□□ 0.76
SMDT1-202ENST00000422252 C11orf87Q6NUJ2 197 aa19.78■□□□□ 0.76
SMDT1-202ENST00000422252 UNQ5815/PRO19632Q6UWF5 114 aa19.78■□□□□ 0.76
SMDT1-202ENST00000422252 CASTOR1Q8WTX7 329 aa19.78■□□□□ 0.76
SMDT1-202ENST00000422252 OR2D2Q9H210 308 aa19.78■□□□□ 0.76
SMDT1-202ENST00000422252 SLC35D1Q9NTN3 355 aa19.78■□□□□ 0.76
SMDT1-202ENST00000422252 DNAH9Q9NYC9 4486 aa19.77■□□□□ 0.76
SMDT1-202ENST00000422252 SNRPBP14678 240 aaKnown RBP19.77■□□□□ 0.76
SMDT1-202ENST00000422252 ECI1P42126 302 aa19.77■□□□□ 0.76
SMDT1-202ENST00000422252 ARFRP1Q13795 201 aa19.77■□□□□ 0.76
SMDT1-202ENST00000422252 ACTBL2Q562R1 376 aa19.77■□□□□ 0.76
SMDT1-202ENST00000422252 SPARTQ8N0X7 666 aa19.77■□□□□ 0.76
SMDT1-202ENST00000422252 PRR25Q96S07 402 aa19.77■□□□□ 0.76
SMDT1-202ENST00000422252 ALX4Q9H161 411 aaPredicted RBP19.77■□□□□ 0.76
SMDT1-202ENST00000422252 SDHAF2Q9NX18 166 aa19.77■□□□□ 0.76
SMDT1-202ENST00000422252 COL7A1Q02388 2944 aa19.77■□□□□ 0.76
SMDT1-202ENST00000422252 PSMB9P28065 219 aa19.76■□□□□ 0.75
SMDT1-202ENST00000422252 INSL3P51460 131 aa19.76■□□□□ 0.75
SMDT1-202ENST00000422252 SRSF7Q16629 238 aaKnown RBP eCLIP19.76■□□□□ 0.75
SMDT1-202ENST00000422252 LFNGQ8NES3 379 aa19.76■□□□□ 0.75
SMDT1-202ENST00000422252 ARPC1AQ92747 370 aa19.76■□□□□ 0.75
SMDT1-202ENST00000422252 ATG5Q9H1Y0 275 aa19.76■□□□□ 0.75
SMDT1-202ENST00000422252 Q9H521 79 aa19.76■□□□□ 0.75
SMDT1-202ENST00000422252 SMIM30A4D0T7 59 aa19.75■□□□□ 0.75
SMDT1-202ENST00000422252 SLC25A17O43808 307 aa19.75■□□□□ 0.75
SMDT1-202ENST00000422252 LGALS1P09382 135 aaKnown RBP19.75■□□□□ 0.75
SMDT1-202ENST00000422252 FGF9P31371 208 aaPredicted RBP19.75■□□□□ 0.75
SMDT1-202ENST00000422252 TALDO1P37837 337 aa19.75■□□□□ 0.75
SMDT1-202ENST00000422252 DCUN1D4Q92564 292 aa19.75■□□□□ 0.75
SMDT1-202ENST00000422252 FCGR1BQ92637 280 aa19.75■□□□□ 0.75
SMDT1-202ENST00000422252 GINS4Q9BRT9 223 aa19.75■□□□□ 0.75
SMDT1-202ENST00000422252 CENPOQ9BU64 300 aa19.75■□□□□ 0.75
SMDT1-202ENST00000422252 TPSG1Q9NRR2 321 aa19.75■□□□□ 0.75
SMDT1-202ENST00000422252 TXNL4BQ9NX01 149 aaKnown RBP19.75■□□□□ 0.75
SMDT1-202ENST00000422252 NOTOA8MTQ0 251 aa19.74■□□□□ 0.75
SMDT1-202ENST00000422252 LINC01619G3V211 115 aa19.74■□□□□ 0.75
SMDT1-202ENST00000422252 CD40LGP29965 261 aa19.74■□□□□ 0.75
SMDT1-202ENST00000422252 FXYD3Q14802 87 aa19.74■□□□□ 0.75
SMDT1-202ENST00000422252 ARL6IP1Q15041 203 aa19.74■□□□□ 0.75
SMDT1-202ENST00000422252 Q6ZS49 121 aa19.74■□□□□ 0.75
SMDT1-202ENST00000422252 C5orf30Q96GV9 206 aa19.74■□□□□ 0.75
SMDT1-202ENST00000422252 YTHDF1Q9BYJ9 559 aaKnown RBP19.74■□□□□ 0.75
SMDT1-202ENST00000422252 STUB1Q9UNE7 303 aa19.74■□□□□ 0.75
SMDT1-202ENST00000422252 LSM4Q9Y4Z0 139 aaKnown RBP19.74■□□□□ 0.75
SMDT1-202ENST00000422252 RBM7Q9Y580 266 aaKnown RBP19.74■□□□□ 0.75
SMDT1-202ENST00000422252 OVOL1O14753 267 aa19.73■□□□□ 0.75
SMDT1-202ENST00000422252 IGLV2-23P01705 113 aa19.73■□□□□ 0.75
SMDT1-202ENST00000422252 LGALS7P47929 136 aa19.73■□□□□ 0.75
SMDT1-202ENST00000422252 TAGLNQ01995 201 aaKnown RBP19.73■□□□□ 0.75
SMDT1-202ENST00000422252 MS4A10Q96PG2 267 aa19.73■□□□□ 0.75
SMDT1-202ENST00000422252 SLA2Q9H6Q3 261 aa19.73■□□□□ 0.75
SMDT1-202ENST00000422252 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.73■□□□□ 0.75
SMDT1-202ENST00000422252 ZNF256Q9Y2P7 627 aaPredicted RBP19.73■□□□□ 0.75
SMDT1-202ENST00000422252 ARPC1BO15143 372 aaKnown RBP19.72■□□□□ 0.75
SMDT1-202ENST00000422252 TPPP2P59282 170 aa19.72■□□□□ 0.75
SMDT1-202ENST00000422252 CBX3Q13185 183 aa19.72■□□□□ 0.75
SMDT1-202ENST00000422252 CDNFQ49AH0 187 aa19.72■□□□□ 0.75
SMDT1-202ENST00000422252 TPRA1Q86W33 373 aa19.72■□□□□ 0.75
SMDT1-202ENST00000422252 GRPEL2Q8TAA5 225 aa19.72■□□□□ 0.75
SMDT1-202ENST00000422252 DLX4Q92988 240 aaPredicted RBP19.72■□□□□ 0.75
SMDT1-202ENST00000422252 HARBI1Q96MB7 349 aa19.72■□□□□ 0.75
SMDT1-202ENST00000422252 ELF5Q9UKW6 265 aaPredicted RBP19.72■□□□□ 0.75
SMDT1-202ENST00000422252 IGHV4OR15-8A0A075B7B6 117 aa19.71■□□□□ 0.75
SMDT1-202ENST00000422252 IGKV1D-8A0A087WSZ0 117 aa19.71■□□□□ 0.75
SMDT1-202ENST00000422252 A0A087WW49 117 aa19.71■□□□□ 0.75
SMDT1-202ENST00000422252 IGHV3-11P01762 117 aa19.71■□□□□ 0.75
SMDT1-202ENST00000422252 DTYMKP23919 212 aa19.71■□□□□ 0.75
SMDT1-202ENST00000422252 SLURP1P55000 103 aa19.71■□□□□ 0.75
SMDT1-202ENST00000422252 ZNF429Q86V71 674 aa19.71■□□□□ 0.75
SMDT1-202ENST00000422252 H1FOOQ8IZA3 346 aaPredicted RBP19.71■□□□□ 0.75
SMDT1-202ENST00000422252 SSR3Q9UNL2 185 aa19.71■□□□□ 0.75
SMDT1-202ENST00000422252 CNIH1O95406 144 aa19.7■□□□□ 0.74
SMDT1-202ENST00000422252 CRYGBP07316 175 aa19.7■□□□□ 0.74
SMDT1-202ENST00000422252 RRASP10301 218 aa19.7■□□□□ 0.74
SMDT1-202ENST00000422252 SSBP2P81877 361 aaPredicted RBP19.7■□□□□ 0.74
SMDT1-202ENST00000422252 RTL8BQ17RB0 113 aa19.7■□□□□ 0.74
SMDT1-202ENST00000422252 TMEM177Q53S58 311 aa19.7■□□□□ 0.74
SMDT1-202ENST00000422252 BVESQ8NE79 360 aa19.7■□□□□ 0.74
SMDT1-202ENST00000422252 RHOVQ96L33 236 aa19.7■□□□□ 0.74
SMDT1-202ENST00000422252 SHOXO15266 292 aa19.69■□□□□ 0.74
SMDT1-202ENST00000422252 TRGV3P03979 118 aa19.69■□□□□ 0.74
SMDT1-202ENST00000422252 HSPB1P04792 205 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms