RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 TBCEQ15813 527 aaPredicted RBP8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 PLAC9Q5JTB6 97 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 ACSM6Q6P461 480 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 LFNGQ8NES3 379 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 GRPEL2Q8TAA5 225 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 CASTOR1Q8WTX7 329 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 NRG4Q8WWG1 115 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 CLCC1Q96S66 551 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 CABLES2Q9BTV7 478 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 VCX3BQ9H321 246 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 TPSG1Q9NRR2 321 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 TMEM272A0A1B0GTI8 110 aa8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 ANKRD65E5RJM6 399 aa8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 PDCD5O14737 125 aa8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 SLC25A17O43808 307 aa8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 PROP1O75360 226 aa8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 IGHV3-11P01762 117 aa8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 HSPB1P04792 205 aaKnown RBP8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 FCGR3AP08637 254 aa8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 GADD45AP24522 165 aa8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 CBX3Q13185 183 aa8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 FXYD3Q14802 87 aa8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 C2orf76Q3KRA6 126 aa8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 ZNF367Q7RTV3 350 aa8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 POC5Q8NA72 575 aa8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 RAB3CQ96E17 227 aa8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 ASCL2Q99929 193 aa8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 OR2D2Q9H210 308 aa8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 SLC35D1Q9NTN3 355 aa8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 RAB22AQ9UL26 194 aa8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 BLOC1S6Q9UL45 172 aa8.91□□□□□ -0.98
SQSTM1-203ENST00000422245 TRGV3P03979 118 aa8.9□□□□□ -0.98
SQSTM1-203ENST00000422245 GP9P14770 177 aa8.9□□□□□ -0.98
SQSTM1-203ENST00000422245 SPNP16150 400 aa8.9□□□□□ -0.98
SQSTM1-203ENST00000422245 ZP3P21754 424 aa8.9□□□□□ -0.98
SQSTM1-203ENST00000422245 MYL9P24844 172 aa8.9□□□□□ -0.98
SQSTM1-203ENST00000422245 MAP2K4P45985 399 aa8.9□□□□□ -0.98
SQSTM1-203ENST00000422245 LGALS7P47929 136 aa8.9□□□□□ -0.98
SQSTM1-203ENST00000422245 HSPA13P48723 471 aa8.9□□□□□ -0.98
SQSTM1-203ENST00000422245 TAGLNQ01995 201 aaKnown RBP8.9□□□□□ -0.98
SQSTM1-203ENST00000422245 HES5Q5TA89 166 aa8.9□□□□□ -0.98
SQSTM1-203ENST00000422245 OR10J5Q8NHC4 309 aa8.9□□□□□ -0.98
SQSTM1-203ENST00000422245 RHOVQ96L33 236 aa8.9□□□□□ -0.98
SQSTM1-203ENST00000422245 HARBI1Q96MB7 349 aa8.9□□□□□ -0.98
SQSTM1-203ENST00000422245 TMEM68Q96MH6 324 aa8.9□□□□□ -0.98
SQSTM1-203ENST00000422245 MS4A10Q96PG2 267 aa8.9□□□□□ -0.98
SQSTM1-203ENST00000422245 OR4C12Q96R67 309 aa8.9□□□□□ -0.98
SQSTM1-203ENST00000422245 CENPOQ9BU64 300 aa8.9□□□□□ -0.98
SQSTM1-203ENST00000422245 ELOVL1Q9BW60 279 aa8.9□□□□□ -0.98
SQSTM1-203ENST00000422245 KCNK7Q9Y2U2 307 aa8.9□□□□□ -0.98
SQSTM1-203ENST00000422245 TRBV6-7A0A0A0MS04 114 aa8.89□□□□□ -0.99
SQSTM1-203ENST00000422245 TRAV1-2A0A0B4J238 106 aa8.89□□□□□ -0.99
SQSTM1-203ENST00000422245 A0A0G2JLM5 398 aa8.89□□□□□ -0.99
SQSTM1-203ENST00000422245 C13orf42A0A1B0GVH6 325 aa8.89□□□□□ -0.99
SQSTM1-203ENST00000422245 C3orf84H3BNL1 204 aa8.89□□□□□ -0.99
SQSTM1-203ENST00000422245 MFNGO00587 321 aa8.89□□□□□ -0.99
SQSTM1-203ENST00000422245 BET1O15155 118 aa8.89□□□□□ -0.99
SQSTM1-203ENST00000422245 CNIH1O95406 144 aa8.89□□□□□ -0.99
SQSTM1-203ENST00000422245 IGLV2-23P01705 113 aa8.89□□□□□ -0.99
SQSTM1-203ENST00000422245 HIST1H1DP16402 221 aaKnown RBP8.89□□□□□ -0.99
SQSTM1-203ENST00000422245 RAB6AP20340 208 aa8.89□□□□□ -0.99
SQSTM1-203ENST00000422245 RTL8BQ17RB0 113 aa8.89□□□□□ -0.99
SQSTM1-203ENST00000422245 MOGAT2Q3SYC2 334 aa8.89□□□□□ -0.99
SQSTM1-203ENST00000422245 IGSF11Q5DX21 431 aa8.89□□□□□ -0.99
SQSTM1-203ENST00000422245 OR10R2Q8NGX6 335 aa8.89□□□□□ -0.99
SQSTM1-203ENST00000422245 ZNF355PQ9NSJ1 428 aa8.89□□□□□ -0.99
SQSTM1-203ENST00000422245 NDUFB11Q9NX14 153 aa8.89□□□□□ -0.99
SQSTM1-203ENST00000422245 SDHAF2Q9NX18 166 aa8.89□□□□□ -0.99
SQSTM1-203ENST00000422245 STUB1Q9UNE7 303 aa8.89□□□□□ -0.99
SQSTM1-203ENST00000422245 IFITM5A6NNB3 132 aa8.88□□□□□ -0.99
SQSTM1-203ENST00000422245 BRI3O95415 125 aa8.88□□□□□ -0.99
SQSTM1-203ENST00000422245 FRMD6-AS1P0C7T7 363 aa8.88□□□□□ -0.99
SQSTM1-203ENST00000422245 RRASP10301 218 aa8.88□□□□□ -0.99
SQSTM1-203ENST00000422245 GNB3P16520 340 aa8.88□□□□□ -0.99
SQSTM1-203ENST00000422245 LINC00205P59089 165 aa8.88□□□□□ -0.99
SQSTM1-203ENST00000422245 SSBP2P81877 361 aaPredicted RBP8.88□□□□□ -0.99
SQSTM1-203ENST00000422245 PLA2G7Q13093 441 aa8.88□□□□□ -0.99
SQSTM1-203ENST00000422245 ARL6IP1Q15041 203 aa8.88□□□□□ -0.99
SQSTM1-203ENST00000422245 SSX1Q16384 188 aa8.88□□□□□ -0.99
SQSTM1-203ENST00000422245 TMEM177Q53S58 311 aa8.88□□□□□ -0.99
SQSTM1-203ENST00000422245 IZUMO2Q6UXV1 221 aa8.88□□□□□ -0.99
SQSTM1-203ENST00000422245 Q6ZS49 121 aa8.88□□□□□ -0.99
SQSTM1-203ENST00000422245 ADTRPQ96IZ2 230 aa8.88□□□□□ -0.99
SQSTM1-203ENST00000422245 RCHY1Q96PM5 261 aa8.88□□□□□ -0.99
SQSTM1-203ENST00000422245 GINS4Q9BRT9 223 aa8.88□□□□□ -0.99
SQSTM1-203ENST00000422245 RANGRFQ9HD47 186 aaPredicted RBP8.88□□□□□ -0.99
SQSTM1-203ENST00000422245 A0A075B6Q4 140 aa8.87□□□□□ -0.99
SQSTM1-203ENST00000422245 METTL21EPA6NDL7 271 aa8.87□□□□□ -0.99
SQSTM1-203ENST00000422245 RAB27BO00194 218 aa8.87□□□□□ -0.99
SQSTM1-203ENST00000422245 SHOXO15266 292 aa8.87□□□□□ -0.99
SQSTM1-203ENST00000422245 CRYGBP07316 175 aa8.87□□□□□ -0.99
SQSTM1-203ENST00000422245 GSTT2P0CG29 244 aa8.87□□□□□ -0.99
SQSTM1-203ENST00000422245 GSTT2BP0CG30 244 aa8.87□□□□□ -0.99
SQSTM1-203ENST00000422245 SNRPBP14678 240 aaKnown RBP8.87□□□□□ -0.99
SQSTM1-203ENST00000422245 GALP22466 123 aa8.87□□□□□ -0.99
SQSTM1-203ENST00000422245 AADACP22760 399 aa8.87□□□□□ -0.99
SQSTM1-203ENST00000422245 TALDO1P37837 337 aa8.87□□□□□ -0.99
SQSTM1-203ENST00000422245 OR10A3P58181 314 aa8.87□□□□□ -0.99
SQSTM1-203ENST00000422245 SRSF7Q16629 238 aaKnown RBP eCLIP8.87□□□□□ -0.99
SQSTM1-203ENST00000422245 VMA21Q3ZAQ7 101 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms