RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 PIGPP57054 158 aa12.62□□□□□ -0.39
DDX55-203ENST00000421670 DEFA1P59665 94 aa12.62□□□□□ -0.39
DDX55-203ENST00000421670 DEFA3P59666 94 aa12.62□□□□□ -0.39
DDX55-203ENST00000421670 DCTN2Q13561 401 aaKnown RBP12.62□□□□□ -0.39
DDX55-203ENST00000421670 HABP2Q14520 560 aaPredicted RBP12.62□□□□□ -0.39
DDX55-203ENST00000421670 SURF2Q15527 256 aaPredicted RBP12.62□□□□□ -0.39
DDX55-203ENST00000421670 MZT2BQ6NZ67 158 aa12.62□□□□□ -0.39
DDX55-203ENST00000421670 Q6YL49 198 aa12.62□□□□□ -0.39
DDX55-203ENST00000421670 ZBTB34Q8NCN2 500 aa12.62□□□□□ -0.39
DDX55-203ENST00000421670 ZFAND1Q8TCF1 268 aa12.62□□□□□ -0.39
DDX55-203ENST00000421670 PIFOQ8TCI5 191 aa12.62□□□□□ -0.39
DDX55-203ENST00000421670 TCTEX1D2Q8WW35 142 aa12.62□□□□□ -0.39
DDX55-203ENST00000421670 DUX5Q96PT3 197 aa12.62□□□□□ -0.39
DDX55-203ENST00000421670 HSD17B10Q99714 261 aaKnown RBP12.62□□□□□ -0.39
DDX55-203ENST00000421670 SLC25A21Q9BQT8 299 aaPredicted RBP12.62□□□□□ -0.39
DDX55-203ENST00000421670 RTBDNQ9BSG5 229 aaPredicted RBP12.62□□□□□ -0.39
DDX55-203ENST00000421670 PRDM13Q9H4Q3 707 aa12.62□□□□□ -0.39
DDX55-203ENST00000421670 PALMDQ9NP74 551 aa12.62□□□□□ -0.39
DDX55-203ENST00000421670 TNFRSF19Q9NS68 423 aa12.62□□□□□ -0.39
DDX55-203ENST00000421670 C14orf166Q9Y224 244 aaKnown RBP12.62□□□□□ -0.39
DDX55-203ENST00000421670 FAM240BA0A1B0GVZ2 78 aa12.61□□□□□ -0.39
DDX55-203ENST00000421670 H7C2Y5 167 aa12.61□□□□□ -0.39
DDX55-203ENST00000421670 PGLYRP1O75594 196 aaPredicted RBP12.61□□□□□ -0.39
DDX55-203ENST00000421670 VENTXO95231 258 aa12.61□□□□□ -0.39
DDX55-203ENST00000421670 IGKV1D-33P01593 117 aa12.61□□□□□ -0.39
DDX55-203ENST00000421670 IGKV1-33P01594 117 aa12.61□□□□□ -0.39
DDX55-203ENST00000421670 SNRNP70P08621 437 aaKnown RBP12.61□□□□□ -0.39
DDX55-203ENST00000421670 BRS3P32247 399 aa12.61□□□□□ -0.39
DDX55-203ENST00000421670 IER3P46695 156 aa12.61□□□□□ -0.39
DDX55-203ENST00000421670 TMED4Q7Z7H5 227 aa12.61□□□□□ -0.39
DDX55-203ENST00000421670 TBC1D26Q86UD7 250 aa12.61□□□□□ -0.39
DDX55-203ENST00000421670 ADAD2Q8NCV1 583 aaKnown RBP12.61□□□□□ -0.39
DDX55-203ENST00000421670 OR5AN1Q8NGI8 311 aa12.61□□□□□ -0.39
DDX55-203ENST00000421670 CAPSLQ8WWF8 208 aa12.61□□□□□ -0.39
DDX55-203ENST00000421670 DDB2Q92466 427 aa12.61□□□□□ -0.39
DDX55-203ENST00000421670 ZNF486Q96H40 463 aaPredicted RBP12.61□□□□□ -0.39
DDX55-203ENST00000421670 DPAGT1Q9H3H5 408 aa12.61□□□□□ -0.39
DDX55-203ENST00000421670 FLVCR2Q9UPI3 526 aa12.61□□□□□ -0.39
DDX55-203ENST00000421670 JMJD1CQ15652 2540 aa12.61□□□□□ -0.39
DDX55-203ENST00000421670 APOA2P02652 100 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 HES1Q14469 280 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 LY6EQ16553 131 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 RBMS3Q6XE24 437 aaKnown RBP12.6□□□□□ -0.39
DDX55-203ENST00000421670 ZNF66Q6ZN08 573 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 NRARPQ7Z6K4 114 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 ZDHHC22Q8N966 263 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 ENKURQ8TC29 256 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 C20orf85Q9H1P6 137 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 SLC35D1Q9NTN3 355 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 COPZ2Q9P299 210 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 DNAJC9-AS1A6NH13 148 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 ARPC1BO15143 372 aaKnown RBP12.6□□□□□ -0.39
DDX55-203ENST00000421670 IGKV1-16P04430 117 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 CD1BP29016 333 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 S100GP29377 79 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 DYNLT3P51808 116 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 BRWD1-AS2P59051 145 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 CATR1Q13166 79 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 HNF4GQ14541 408 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 AANATQ16613 207 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 TMEM219Q86XT9 240 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 SSMEM1Q8WWF3 244 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 TMEM230Q96A57 120 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 ADTRPQ96IZ2 230 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 SCGB3A2Q96PL1 93 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 ESM1Q9NQ30 184 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 NUDT15Q9NV35 164 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 WASHC3Q9Y3C0 194 aa12.6□□□□□ -0.39
DDX55-203ENST00000421670 TRAV6A0A075B6T7 132 aa12.59□□□□□ -0.39
DDX55-203ENST00000421670 FAM90A9PA6NNJ1 464 aa12.59□□□□□ -0.39
DDX55-203ENST00000421670 RAMP3O60896 148 aa12.59□□□□□ -0.39
DDX55-203ENST00000421670 FCGR3BO75015 233 aa12.59□□□□□ -0.39
DDX55-203ENST00000421670 TCRBP04435 133 aa12.59□□□□□ -0.39
DDX55-203ENST00000421670 AKR1C4P17516 323 aa12.59□□□□□ -0.39
DDX55-203ENST00000421670 RND3P61587 244 aa12.59□□□□□ -0.39
DDX55-203ENST00000421670 CCDC71LQ8N9Z2 235 aa12.59□□□□□ -0.39
DDX55-203ENST00000421670 ZNF418Q8TF45 676 aaPredicted RBP12.59□□□□□ -0.39
DDX55-203ENST00000421670 LIN7CQ9NUP9 197 aaKnown RBP12.59□□□□□ -0.39
DDX55-203ENST00000421670 TCF19Q9Y242 345 aa12.59□□□□□ -0.39
DDX55-203ENST00000421670 PRELID3BQ9Y3B1 194 aa12.59□□□□□ -0.39
DDX55-203ENST00000421670 RNF212BA8MTL3 300 aa12.58□□□□□ -0.4
DDX55-203ENST00000421670 MPPED1O15442 326 aa12.58□□□□□ -0.4
DDX55-203ENST00000421670 PEX14O75381 377 aa12.58□□□□□ -0.4
DDX55-203ENST00000421670 CRYZL1O95825 349 aa12.58□□□□□ -0.4
DDX55-203ENST00000421670 F2RP25116 425 aa12.58□□□□□ -0.4
DDX55-203ENST00000421670 RTL8BQ17RB0 113 aa12.58□□□□□ -0.4
DDX55-203ENST00000421670 CCBE1Q6UXH8 406 aaPredicted RBP12.58□□□□□ -0.4
DDX55-203ENST00000421670 PDPNQ86YL7 162 aa12.58□□□□□ -0.4
DDX55-203ENST00000421670 SPAG16Q8N0X2 631 aa12.58□□□□□ -0.4
DDX55-203ENST00000421670 CENPSQ8N2Z9 138 aa12.58□□□□□ -0.4
DDX55-203ENST00000421670 EAF1Q96JC9 268 aaPredicted RBP12.58□□□□□ -0.4
DDX55-203ENST00000421670 RITA1Q96K30 269 aa12.58□□□□□ -0.4
DDX55-203ENST00000421670 BTBD17A6NE02 478 aa12.57□□□□□ -0.4
DDX55-203ENST00000421670 CRYM-AS1A6NIL9 109 aa12.57□□□□□ -0.4
DDX55-203ENST00000421670 MOSP00540 346 aa12.57□□□□□ -0.4
DDX55-203ENST00000421670 FAM106CPP0CH98 169 aa12.57□□□□□ -0.4
DDX55-203ENST00000421670 SPNP16150 400 aa12.57□□□□□ -0.4
DDX55-203ENST00000421670 TMEM11P17152 192 aa12.57□□□□□ -0.4
DDX55-203ENST00000421670 ANXA7P20073 488 aaKnown RBP12.57□□□□□ -0.4
DDX55-203ENST00000421670 MC5RP33032 325 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms