RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 RELNP78509 3460 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 ODAMA1E959 279 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 ZFP92A6NM28 416 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 K7N7A8 449 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 M0R1X1 148 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 IFNA17P01571 189 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 LMO1P25800 156 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 TNFAIP6P98066 277 aaPredicted RBP9.13□□□□□ -0.95
DDX56-203ENST00000421223 IGFL3Q6UXB1 125 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 ZNF295-AS1Q8N0V1 137 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 SCRT1Q9BWW7 348 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 RBKSQ9H477 322 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 GNG13Q9P2W3 67 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 ARG1P05089 322 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 RAB5CP51148 216 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 ERVFRD-1P60508 538 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 AWAT1Q58HT5 328 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 SOHLH1Q5JUK2 328 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 NCR3LG1Q68D85 454 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 GNPNAT1Q96EK6 184 aaPredicted RBP9.13□□□□□ -0.95
DDX56-203ENST00000421223 CLCC1Q96S66 551 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 CCL13Q99616 98 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 SCNM1Q9BWG6 230 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 NPIPB11E5RHQ5 1161 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 ZG16O60844 167 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 GLRXP35754 106 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 GNG10P50151 68 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 RAB13P51153 203 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 BAXQ07812 192 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 DOLPP1Q86YN1 238 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 SNRNP40Q96DI7 357 aaKnown RBP9.13□□□□□ -0.95
DDX56-203ENST00000421223 OR4C12Q96R67 309 aa9.13□□□□□ -0.95
DDX56-203ENST00000421223 ARFGEF3Q5TH69 2177 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 NCOR2Q9Y618 2525 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 CHD8Q9HCK8 2581 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 SPTBN1Q01082 2364 aaKnown RBP9.12□□□□□ -0.95
DDX56-203ENST00000421223 COLCA2A8K830 154 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 A8MXE2 369 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 DFFBO76075 338 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 CLDN14O95500 239 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 GYPAP02724 150 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 FAM87AP0C7U9 286 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 HOXA1P49639 335 aaPredicted RBP9.12□□□□□ -0.95
DDX56-203ENST00000421223 MZT1Q08AG7 82 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 MSMO1Q15800 293 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 ADAM5Q6NVV9 412 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 FAM57AQ8TBR7 257 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 LSM10Q969L4 123 aaKnown RBP9.12□□□□□ -0.95
DDX56-203ENST00000421223 HINT2Q9BX68 163 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 KPTNQ9Y664 436 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 WSB1Q9Y6I7 421 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 RBFOX3A6NFN3 312 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 SRRM5B3KS81 715 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 CRYBA1P05813 215 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 TAS2R30P59541 319 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 HBG1P69891 147 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 HBG2P69892 147 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 TNFRSF9Q07011 255 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 IGF2-ASQ6U949 168 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 PPP1R35Q8TAP8 253 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 RPRMQ9NS64 109 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 MMP24Q9Y5R2 645 aa9.12□□□□□ -0.95
DDX56-203ENST00000421223 SPTAN1Q13813 2472 aaKnown RBP9.11□□□□□ -0.95
DDX56-203ENST00000421223 A0A0G2JNJ9 132 aa9.11□□□□□ -0.95
DDX56-203ENST00000421223 C7orf77A4D0Y5 90 aa9.11□□□□□ -0.95
DDX56-203ENST00000421223 NDUFB7P17568 137 aa9.11□□□□□ -0.95
DDX56-203ENST00000421223 CD40P25942 277 aa9.11□□□□□ -0.95
DDX56-203ENST00000421223 SLC38A11Q08AI6 406 aa9.11□□□□□ -0.95
DDX56-203ENST00000421223 HAPLN4Q86UW8 402 aa9.11□□□□□ -0.95
DDX56-203ENST00000421223 SLC35B3Q9H1N7 401 aa9.11□□□□□ -0.95
DDX56-203ENST00000421223 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.11□□□□□ -0.95
DDX56-203ENST00000421223 Q9UFV3 132 aa9.11□□□□□ -0.95
DDX56-203ENST00000421223 SMCO3A2RU48 225 aa9.11□□□□□ -0.95
DDX56-203ENST00000421223 IFNL4K9M1U5 179 aa9.11□□□□□ -0.95
DDX56-203ENST00000421223 ZNF737O75373 536 aa9.11□□□□□ -0.95
DDX56-203ENST00000421223 PAX6P26367 422 aa9.11□□□□□ -0.95
DDX56-203ENST00000421223 BRWD1-AS2P59051 145 aa9.11□□□□□ -0.95
DDX56-203ENST00000421223 AVPI1Q5T686 147 aa9.11□□□□□ -0.95
DDX56-203ENST00000421223 FAM216BQ8N7L0 139 aa9.11□□□□□ -0.95
DDX56-203ENST00000421223 TRBV23-1A0A0A0MS06 115 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 MGST3O14880 152 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 SLC31A2O15432 143 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 DEFA4P12838 97 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 TLE4Q04727 773 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 COMMD1Q8N668 190 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 R3HDM4Q96D70 268 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 LRRC30A6NM36 301 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 MARCH11A6NNE9 402 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 C16orf97H3BN30 126 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 TMPRSS2O15393 492 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 FOLR2P14207 255 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 MMP9P14780 707 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 GZMHP20718 246 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 PTAFRP25105 342 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 TIMP3P35625 211 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 NBL1P41271 181 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 ZNF134P52741 427 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 KRTCAP3Q53RY4 240 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 PRAMEF5Q5TYX0 476 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 SPSB3Q6PJ21 355 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms