RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 RBM7Q9Y580 266 aaKnown RBP16.56■□□□□ 0.24
PTPN4-202ENST00000420482 M0R1X1 148 aa16.55■□□□□ 0.24
PTPN4-202ENST00000420482 FCN1O00602 326 aa16.55■□□□□ 0.24
PTPN4-202ENST00000420482 ARPC1BO15143 372 aaKnown RBP16.55■□□□□ 0.24
PTPN4-202ENST00000420482 MRPS14O60783 128 aaKnown RBP16.55■□□□□ 0.24
PTPN4-202ENST00000420482 LY86O95711 162 aa16.55■□□□□ 0.24
PTPN4-202ENST00000420482 CA2P00918 260 aa16.55■□□□□ 0.24
PTPN4-202ENST00000420482 LGALS1P09382 135 aaKnown RBP16.55■□□□□ 0.24
PTPN4-202ENST00000420482 TALDO1P37837 337 aa16.55■□□□□ 0.24
PTPN4-202ENST00000420482 C19orf54Q5BKX5 351 aa16.55■□□□□ 0.24
PTPN4-202ENST00000420482 ARPC1AQ92747 370 aa16.55■□□□□ 0.24
PTPN4-202ENST00000420482 WWC2-AS2Q96NR7 200 aa16.55■□□□□ 0.24
PTPN4-202ENST00000420482 SLC35D1Q9NTN3 355 aa16.55■□□□□ 0.24
PTPN4-202ENST00000420482 GAB2Q9UQC2 676 aa16.55■□□□□ 0.24
PTPN4-202ENST00000420482 IGKV1-6A0A0C4DH72 117 aa16.54■□□□□ 0.24
PTPN4-202ENST00000420482 TRDV1A0A1B0GX56 115 aa16.54■□□□□ 0.24
PTPN4-202ENST00000420482 IGKV1-16P04430 117 aa16.54■□□□□ 0.24
PTPN4-202ENST00000420482 FCGR3AP08637 254 aa16.54■□□□□ 0.24
PTPN4-202ENST00000420482 LGALS7P47929 136 aa16.54■□□□□ 0.24
PTPN4-202ENST00000420482 ARFRP1Q13795 201 aa16.54■□□□□ 0.24
PTPN4-202ENST00000420482 SSX1Q16384 188 aa16.54■□□□□ 0.24
PTPN4-202ENST00000420482 ZNF383Q8NA42 475 aa16.54■□□□□ 0.24
PTPN4-202ENST00000420482 LFNGQ8NES3 379 aa16.54■□□□□ 0.24
PTPN4-202ENST00000420482 DCUN1D4Q92564 292 aa16.54■□□□□ 0.24
PTPN4-202ENST00000420482 GINS4Q9BRT9 223 aa16.54■□□□□ 0.24
PTPN4-202ENST00000420482 OR2D2Q9H210 308 aa16.54■□□□□ 0.24
PTPN4-202ENST00000420482 LSM4Q9Y4Z0 139 aaKnown RBP16.54■□□□□ 0.24
PTPN4-202ENST00000420482 RYR3Q15413 4870 aa16.53■□□□□ 0.24
PTPN4-202ENST00000420482 A0A075B6Q4 140 aa16.53■□□□□ 0.24
PTPN4-202ENST00000420482 SOX15O60248 233 aa16.53■□□□□ 0.24
PTPN4-202ENST00000420482 SAP30O75446 220 aa16.53■□□□□ 0.24
PTPN4-202ENST00000420482 CNIH1O95406 144 aa16.53■□□□□ 0.24
PTPN4-202ENST00000420482 OR8U9P0C7N5 309 aa16.53■□□□□ 0.24
PTPN4-202ENST00000420482 TPPP2P59282 170 aa16.53■□□□□ 0.24
PTPN4-202ENST00000420482 GABARAPL2P60520 117 aa16.53■□□□□ 0.24
PTPN4-202ENST00000420482 FAM103A1Q9BTL3 118 aaKnown RBP16.53■□□□□ 0.24
PTPN4-202ENST00000420482 CABLES2Q9BTV7 478 aa16.53■□□□□ 0.24
PTPN4-202ENST00000420482 TRBV6-7A0A0A0MS04 114 aa16.52■□□□□ 0.24
PTPN4-202ENST00000420482 SLC25A17O43808 307 aa16.52■□□□□ 0.24
PTPN4-202ENST00000420482 PROP1O75360 226 aa16.52■□□□□ 0.24
PTPN4-202ENST00000420482 RRASP10301 218 aa16.52■□□□□ 0.24
PTPN4-202ENST00000420482 EGR2P11161 476 aaPredicted RBP16.52■□□□□ 0.24
PTPN4-202ENST00000420482 HIST1H1DP16402 221 aaKnown RBP16.52■□□□□ 0.24
PTPN4-202ENST00000420482 GNB3P16520 340 aa16.52■□□□□ 0.24
PTPN4-202ENST00000420482 FXYD3Q14802 87 aa16.52■□□□□ 0.24
PTPN4-202ENST00000420482 RTL8BQ17RB0 113 aa16.52■□□□□ 0.24
PTPN4-202ENST00000420482 ASPHD1Q5U4P2 390 aa16.52■□□□□ 0.24
PTPN4-202ENST00000420482 TMEM68Q96MH6 324 aa16.52■□□□□ 0.24
PTPN4-202ENST00000420482 ZNF355PQ9NSJ1 428 aa16.52■□□□□ 0.24
PTPN4-202ENST00000420482 KCNK7Q9Y2U2 307 aa16.52■□□□□ 0.24
PTPN4-202ENST00000420482 H3BUA1 57 aa16.51■□□□□ 0.23
PTPN4-202ENST00000420482 HSPB1P04792 205 aaKnown RBP16.51■□□□□ 0.23
PTPN4-202ENST00000420482 GSTT2P0CG29 244 aa16.51■□□□□ 0.23
PTPN4-202ENST00000420482 GSTT2BP0CG30 244 aa16.51■□□□□ 0.23
PTPN4-202ENST00000420482 OR10A3P58181 314 aa16.51■□□□□ 0.23
PTPN4-202ENST00000420482 SRSF7Q16629 238 aaKnown RBP eCLIP16.51■□□□□ 0.232e-8■■■■■ 27
PTPN4-202ENST00000420482 MOGAT2Q3SYC2 334 aa16.51■□□□□ 0.23
PTPN4-202ENST00000420482 IGSF11Q5DX21 431 aa16.51■□□□□ 0.23
PTPN4-202ENST00000420482 OR6Q1Q8NGQ2 317 aa16.51■□□□□ 0.23
PTPN4-202ENST00000420482 GRPEL2Q8TAA5 225 aa16.51■□□□□ 0.23
PTPN4-202ENST00000420482 CASTOR1Q8WTX7 329 aa16.51■□□□□ 0.23
PTPN4-202ENST00000420482 DLX4Q92988 240 aaPredicted RBP16.51■□□□□ 0.23
PTPN4-202ENST00000420482 ADTRPQ96IZ2 230 aa16.51■□□□□ 0.23
PTPN4-202ENST00000420482 HARBI1Q96MB7 349 aa16.51■□□□□ 0.23
PTPN4-202ENST00000420482 MS4A10Q96PG2 267 aa16.51■□□□□ 0.23
PTPN4-202ENST00000420482 ALX4Q9H161 411 aaPredicted RBP16.51■□□□□ 0.23
PTPN4-202ENST00000420482 Q9H521 79 aa16.51■□□□□ 0.23
PTPN4-202ENST00000420482 SMAD5-AS1Q9Y6J3 95 aa16.51■□□□□ 0.23
PTPN4-202ENST00000420482 A0A0G2JLM5 398 aa16.5■□□□□ 0.23
PTPN4-202ENST00000420482 RAB27BO00194 218 aa16.5■□□□□ 0.23
PTPN4-202ENST00000420482 MFNGO00587 321 aa16.5■□□□□ 0.23
PTPN4-202ENST00000420482 TRGV3P03979 118 aa16.5■□□□□ 0.23
PTPN4-202ENST00000420482 PITPNAQ00169 270 aa16.5■□□□□ 0.23
PTPN4-202ENST00000420482 C22orf42Q6IC83 251 aa16.5■□□□□ 0.23
PTPN4-202ENST00000420482 ATG5Q9H1Y0 275 aa16.5■□□□□ 0.23
PTPN4-202ENST00000420482 SDHAF2Q9NX18 166 aa16.5■□□□□ 0.23
PTPN4-202ENST00000420482 U3KQK5 164 aa16.5■□□□□ 0.23
PTPN4-202ENST00000420482 IGHV4OR15-8A0A075B7B6 117 aa16.49■□□□□ 0.23
PTPN4-202ENST00000420482 A0A087WW49 117 aa16.49■□□□□ 0.23
PTPN4-202ENST00000420482 C13orf42A0A1B0GVH6 325 aa16.49■□□□□ 0.23
PTPN4-202ENST00000420482 SHOXO15266 292 aa16.49■□□□□ 0.23
PTPN4-202ENST00000420482 SCGNO76038 276 aa16.49■□□□□ 0.23
PTPN4-202ENST00000420482 SLURP1P55000 103 aa16.49■□□□□ 0.23
PTPN4-202ENST00000420482 PLA2G7Q13093 441 aa16.49■□□□□ 0.23
PTPN4-202ENST00000420482 POC5Q8NA72 575 aa16.49■□□□□ 0.23
PTPN4-202ENST00000420482 FCGR1BQ92637 280 aa16.49■□□□□ 0.23
PTPN4-202ENST00000420482 OR4C12Q96R67 309 aa16.49■□□□□ 0.23
PTPN4-202ENST00000420482 ELOVL1Q9BW60 279 aa16.49■□□□□ 0.23
PTPN4-202ENST00000420482 IGHV3-11P01762 117 aa16.48■□□□□ 0.23
PTPN4-202ENST00000420482 LINC00205P59089 165 aa16.48■□□□□ 0.23
PTPN4-202ENST00000420482 Q6ZS49 121 aa16.48■□□□□ 0.23
PTPN4-202ENST00000420482 RHOVQ96L33 236 aa16.48■□□□□ 0.23
PTPN4-202ENST00000420482 RANGRFQ9HD47 186 aaPredicted RBP16.48■□□□□ 0.23
PTPN4-202ENST00000420482 ZNF230Q9UIE0 474 aaPredicted RBP16.48■□□□□ 0.23
PTPN4-202ENST00000420482 SHISA3A0PJX4 238 aa16.47■□□□□ 0.23
PTPN4-202ENST00000420482 CTXN2P0C2S0 81 aa16.47■□□□□ 0.23
PTPN4-202ENST00000420482 ZP3P21754 424 aa16.47■□□□□ 0.23
PTPN4-202ENST00000420482 DTYMKP23919 212 aa16.47■□□□□ 0.23
PTPN4-202ENST00000420482 PSMB9P28065 219 aa16.47■□□□□ 0.23
PTPN4-202ENST00000420482 VMA21Q3ZAQ7 101 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms