RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 LINC01548A6NM66 108 aa14.36□□□□□ -0.11
ECHDC3-202ENST00000420401 TUSC2O75896 110 aa14.36□□□□□ -0.11
ECHDC3-202ENST00000420401 NDUFA3O95167 84 aa14.36□□□□□ -0.11
ECHDC3-202ENST00000420401 OPN1MWP04001 364 aa14.36□□□□□ -0.11
ECHDC3-202ENST00000420401 FCER2P06734 321 aa14.36□□□□□ -0.11
ECHDC3-202ENST00000420401 OPN1MW2P0DN77 364 aa14.36□□□□□ -0.11
ECHDC3-202ENST00000420401 OPN1MW3P0DN78 364 aa14.36□□□□□ -0.11
ECHDC3-202ENST00000420401 OR5H8P0DN80 308 aa14.36□□□□□ -0.11
ECHDC3-202ENST00000420401 RRASP10301 218 aa14.36□□□□□ -0.11
ECHDC3-202ENST00000420401 FCGR2CP31995 323 aa14.36□□□□□ -0.11
ECHDC3-202ENST00000420401 LINC00205P59089 165 aa14.36□□□□□ -0.11
ECHDC3-202ENST00000420401 RPS16P62249 146 aaKnown RBP14.36□□□□□ -0.11
ECHDC3-202ENST00000420401 STPG2Q8N412 459 aa14.36□□□□□ -0.11
ECHDC3-202ENST00000420401 FAM110DQ8TAY7 271 aaPredicted RBP14.36□□□□□ -0.11
ECHDC3-202ENST00000420401 SNAPC3Q92966 411 aa14.36□□□□□ -0.11
ECHDC3-202ENST00000420401 NOL4LQ96MY1 436 aaPredicted RBP14.36□□□□□ -0.11
ECHDC3-202ENST00000420401 TSNAXQ99598 290 aaKnown RBP14.36□□□□□ -0.11
ECHDC3-202ENST00000420401 SLC35D1Q9NTN3 355 aa14.36□□□□□ -0.11
ECHDC3-202ENST00000420401 TCRBV4S1A1TA0A5B7 111 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 RRHO14718 337 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 HLA-DRB1P01911 266 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 IGKV1-16P04430 117 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 TAS2R46P59540 309 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 CD83Q01151 205 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 CDK10Q15131 360 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 PLGLAQ15195 96 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 RTL8BQ17RB0 113 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 NSUN5P1Q3KNT7 163 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 SNX29P2Q8IUI4 249 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 COMMD1Q8N668 190 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 C15orf40Q8WUR7 153 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 ISOC1Q96CN7 298 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 C5orf30Q96GV9 206 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 HSPB9Q9BQS6 159 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 CCDC59Q9P031 241 aaKnown RBP14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 EXTL2Q9UBQ6 330 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 LINC00527Q9UJ94 153 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 ADAM30Q9UKF2 790 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 ANAPC10Q9UM13 185 aa14.35□□□□□ -0.11
ECHDC3-202ENST00000420401 IGKV1D-13A0A0B4J2D9 117 aa14.34□□□□□ -0.11
ECHDC3-202ENST00000420401 H3BMQ9 156 aa14.34□□□□□ -0.11
ECHDC3-202ENST00000420401 SULT1C2O00338 296 aa14.34□□□□□ -0.11
ECHDC3-202ENST00000420401 RGS5O15539 181 aa14.34□□□□□ -0.11
ECHDC3-202ENST00000420401 TPPPO94811 219 aa14.34□□□□□ -0.11
ECHDC3-202ENST00000420401 SPDEFO95238 335 aa14.34□□□□□ -0.11
ECHDC3-202ENST00000420401 IGKV1-13P0DP09 117 aa14.34□□□□□ -0.11
ECHDC3-202ENST00000420401 NAT1P18440 290 aa14.34□□□□□ -0.11
ECHDC3-202ENST00000420401 AADACP22760 399 aa14.34□□□□□ -0.11
ECHDC3-202ENST00000420401 DUTP33316 252 aaKnown RBP14.34□□□□□ -0.11
ECHDC3-202ENST00000420401 ZNF329Q86UD4 541 aa14.34□□□□□ -0.11
ECHDC3-202ENST00000420401 BVESQ8NE79 360 aa14.34□□□□□ -0.11
ECHDC3-202ENST00000420401 DYNC2LI1Q8TCX1 351 aa14.34□□□□□ -0.11
ECHDC3-202ENST00000420401 GPX8Q8TED1 209 aa14.34□□□□□ -0.11
ECHDC3-202ENST00000420401 GIMAP1Q8WWP7 306 aa14.34□□□□□ -0.11
ECHDC3-202ENST00000420401 ZNF580Q9UK33 172 aa14.34□□□□□ -0.11
ECHDC3-202ENST00000420401 RBMX2Q9Y388 322 aaKnown RBP14.34□□□□□ -0.11
ECHDC3-202ENST00000420401 TSSC4Q9Y5U2 329 aaPredicted RBP14.34□□□□□ -0.11
ECHDC3-202ENST00000420401 NBEAL2Q6ZNJ1 2754 aa14.34□□□□□ -0.11
ECHDC3-202ENST00000420401 TET2Q6N021 2002 aaPredicted RBP14.33□□□□□ -0.12
ECHDC3-202ENST00000420401 TSPAN15O95858 294 aa14.33□□□□□ -0.12
ECHDC3-202ENST00000420401 PPYP01298 95 aa14.33□□□□□ -0.12
ECHDC3-202ENST00000420401 IGF1P05019 195 aa14.33□□□□□ -0.12
ECHDC3-202ENST00000420401 VDAC1P21796 283 aa14.33□□□□□ -0.12
ECHDC3-202ENST00000420401 LGALS7P47929 136 aa14.33□□□□□ -0.12
ECHDC3-202ENST00000420401 PSG5Q15238 335 aa14.33□□□□□ -0.12
ECHDC3-202ENST00000420401 TCTEX1D4Q5JR98 221 aa14.33□□□□□ -0.12
ECHDC3-202ENST00000420401 C10orf99Q6UWK7 81 aa14.33□□□□□ -0.12
ECHDC3-202ENST00000420401 OR5H2Q8NGV7 314 aa14.33□□□□□ -0.12
ECHDC3-202ENST00000420401 HSD17B10Q99714 261 aaKnown RBP14.33□□□□□ -0.12
ECHDC3-202ENST00000420401 OR51J1Q9H342 316 aa14.33□□□□□ -0.12
ECHDC3-202ENST00000420401 FBXL15Q9H469 300 aa14.33□□□□□ -0.12
ECHDC3-202ENST00000420401 EHFQ9NZC4 300 aa14.33□□□□□ -0.12
ECHDC3-202ENST00000420401 METTL1Q9UBP6 276 aaKnown RBP14.33□□□□□ -0.12
ECHDC3-202ENST00000420401 CEPT1Q9Y6K0 416 aa14.33□□□□□ -0.12
ECHDC3-202ENST00000420401 PMP2P02689 132 aa14.32□□□□□ -0.12
ECHDC3-202ENST00000420401 MSMO1Q15800 293 aa14.32□□□□□ -0.12
ECHDC3-202ENST00000420401 TMEM177Q53S58 311 aa14.32□□□□□ -0.12
ECHDC3-202ENST00000420401 ZNF660Q6AZW8 331 aaPredicted RBP14.32□□□□□ -0.12
ECHDC3-202ENST00000420401 TEX38Q6PEX7 206 aa14.32□□□□□ -0.12
ECHDC3-202ENST00000420401 DHRS11Q6UWP2 260 aa14.32□□□□□ -0.12
ECHDC3-202ENST00000420401 OVCH2Q7RTZ1 564 aa14.32□□□□□ -0.12
ECHDC3-202ENST00000420401 OR4F17Q8NGA8 305 aa14.32□□□□□ -0.12
ECHDC3-202ENST00000420401 DDB2Q92466 427 aa14.32□□□□□ -0.12
ECHDC3-202ENST00000420401 OR4F4Q96R69 305 aa14.32□□□□□ -0.12
ECHDC3-202ENST00000420401 PRELID3BQ9Y3B1 194 aa14.32□□□□□ -0.12
ECHDC3-202ENST00000420401 IGHV7-81A0A0B4J1V7 117 aa14.31□□□□□ -0.12
ECHDC3-202ENST00000420401 CCDC160A6NGH7 325 aa14.31□□□□□ -0.12
ECHDC3-202ENST00000420401 LINC00473A8K010 186 aa14.31□□□□□ -0.12
ECHDC3-202ENST00000420401 SHOXO15266 292 aa14.31□□□□□ -0.12
ECHDC3-202ENST00000420401 IGLV2-14P01704 120 aa14.31□□□□□ -0.12
ECHDC3-202ENST00000420401 RCVRNP35243 200 aa14.31□□□□□ -0.12
ECHDC3-202ENST00000420401 RFX2P48378 723 aa14.31□□□□□ -0.12
ECHDC3-202ENST00000420401 HERV-K104P61576 105 aa14.31□□□□□ -0.12
ECHDC3-202ENST00000420401 DYRK1AQ13627 763 aa14.31□□□□□ -0.12
ECHDC3-202ENST00000420401 KHDC1LQ5JSQ8 128 aa14.31□□□□□ -0.12
ECHDC3-202ENST00000420401 LYSMD2Q8IV50 215 aa14.31□□□□□ -0.12
ECHDC3-202ENST00000420401 ZBTB34Q8NCN2 500 aa14.31□□□□□ -0.12
ECHDC3-202ENST00000420401 SECTM1Q8WVN6 248 aa14.31□□□□□ -0.12
ECHDC3-202ENST00000420401 HARBI1Q96MB7 349 aa14.31□□□□□ -0.12
ECHDC3-202ENST00000420401 PARP11Q9NR21 331 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms