RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 B4E171 279 aa12.76□□□□□ -0.37
SEMA3B-203ENST00000419007 NPIPB11E5RHQ5 1161 aa12.76□□□□□ -0.37
SEMA3B-203ENST00000419007 WNT9BO14905 357 aa12.76□□□□□ -0.37
SEMA3B-203ENST00000419007 PSPNO60542 156 aa12.76□□□□□ -0.37
SEMA3B-203ENST00000419007 GYPAP02724 150 aa12.76□□□□□ -0.37
SEMA3B-203ENST00000419007 TSPAN7P41732 249 aa12.76□□□□□ -0.37
SEMA3B-203ENST00000419007 GABRA2P47869 451 aa12.76□□□□□ -0.37
SEMA3B-203ENST00000419007 CST9LP1Q5W188 147 aa12.76□□□□□ -0.37
SEMA3B-203ENST00000419007 DTD1Q8TEA8 209 aa12.76□□□□□ -0.37
SEMA3B-203ENST00000419007 ACTR3CQ9C0K3 210 aaPredicted RBP12.76□□□□□ -0.37
SEMA3B-203ENST00000419007 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.76□□□□□ -0.37
SEMA3B-203ENST00000419007 C17orf98A8MV24 154 aa12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 C1QTNF9BB2RNN3 333 aa12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 COX5AP20674 150 aa12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 FAM3BP58499 235 aaPredicted RBP12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 TBC1D28Q2M2D7 210 aa12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 REC114Q7Z4M0 266 aa12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 MRGPRDQ8TDS7 321 aa12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 OBP2BQ9NPH6 170 aa12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 WASF3Q9UPY6 502 aa12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 MAP1BP46821 2468 aaKnown RBP12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 LRRC30A6NM36 301 aa12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 GALR2O43603 387 aaPredicted RBP12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 HAND1O96004 215 aa12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 GZMBP10144 247 aa12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 PRSS8Q16651 343 aa12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 NANOS1Q8WY41 292 aaKnown RBP12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 TNRC6BQ9UPQ9 1833 aaKnown RBP12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 PRSS47A8MTI9 375 aa12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 PPP1CBP62140 327 aa12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 H2BFWTQ7Z2G1 175 aa12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 ZNF645Q8N7E2 425 aa12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 SDSLQ96GA7 329 aa12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 HSPB7Q9UBY9 170 aa12.75□□□□□ -0.37
SEMA3B-203ENST00000419007 PCSK5Q92824 1860 aa12.74□□□□□ -0.37
SEMA3B-203ENST00000419007 MUC6Q6W4X9 2439 aa12.74□□□□□ -0.37
SEMA3B-203ENST00000419007 C12orf77C9JDV5 145 aa12.74□□□□□ -0.37
SEMA3B-203ENST00000419007 PMS2P11Q13670 270 aa12.74□□□□□ -0.37
SEMA3B-203ENST00000419007 OR2T10Q8NGZ9 312 aa12.74□□□□□ -0.37
SEMA3B-203ENST00000419007 C11orf94C9JXX5 98 aa12.74□□□□□ -0.37
SEMA3B-203ENST00000419007 FAM90A26D6RGX4 464 aa12.74□□□□□ -0.37
SEMA3B-203ENST00000419007 TMEM250H0YL14 139 aa12.74□□□□□ -0.37
SEMA3B-203ENST00000419007 HRASP01112 189 aa12.74□□□□□ -0.37
SEMA3B-203ENST00000419007 CATR1Q13166 79 aa12.74□□□□□ -0.37
SEMA3B-203ENST00000419007 Q8IYB0 196 aa12.74□□□□□ -0.37
SEMA3B-203ENST00000419007 NPCDR1Q9BY65 106 aa12.74□□□□□ -0.37
SEMA3B-203ENST00000419007 MEOX1P50221 254 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 JOSD1Q15040 202 aaPredicted RBP12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 GCSAMLQ5JQS6 135 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 FBXW9Q5XUX1 488 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 MRPL41Q8IXM3 137 aaKnown RBP12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 SLC25A40Q8TBP6 338 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 NEIL1Q96FI4 390 aaPredicted RBP12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 STRADBQ9C0K7 418 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 FAM234AQ9H0X4 552 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 FOXJ2Q9P0K8 574 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 ICE1Q9Y2F5 2266 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 TMEM30CPA0ZSE6 113 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 HBZP02008 142 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 ACSF3Q4G176 576 aaPredicted RBP12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 GCNT2Q8N0V5 402 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 BCL2L2Q92843 193 aaPredicted RBP12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 AGMATQ9BSE5 352 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 MBNL3Q9NUK0 354 aaKnown RBP12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 TIMM9Q9Y5J7 89 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 RP1L1Q8IWN7 2480 aaPredicted RBP12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 TRAV38-1A0A0B4J264 116 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 A0A0U1RQK1 487 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 LYZL6O75951 148 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 MBP02144 154 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 HOXA6P31267 233 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 EDDM3BP56851 147 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 UBE2NP61088 152 aaKnown RBP12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 DCAF10Q5QP82 559 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 FAM78BQ5VT40 261 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 C5orf30Q96GV9 206 aa12.73□□□□□ -0.37
SEMA3B-203ENST00000419007 MPLP40238 635 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 MRPL49Q13405 166 aaKnown RBP12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 Q3ZCU0 254 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 TMEM204Q9BSN7 226 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 MANBALQ9NQG1 85 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 FZR1Q9UM11 496 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 PGPEP1LA6NFU8 196 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 DVL1O14640 695 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 SNRPCP09234 159 aaKnown RBP12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 NDUFB7P17568 137 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 HNF1AP20823 631 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 SSTR5P35346 364 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 CDC34P49427 236 aaPredicted RBP12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 NUBP1P53384 320 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 SLC10A1Q14973 349 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 ZNF664Q8N3J9 261 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 OR5R1Q8NH85 324 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 ARRDC1-AS1Q9H2J1 176 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 C9orf172C9J069 976 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 ST8SIA5O15466 376 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 SMPD2O60906 423 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 ERVK11-1P61568 191 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 ATP6V1FQ16864 119 aa12.72□□□□□ -0.37
SEMA3B-203ENST00000419007 PSG11Q9UQ72 335 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms