RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ELANEP08246 267 aa16.1■□□□□ 0.17
PKNOX1-202ENST00000418336 PTHLHP12272 177 aa16.1■□□□□ 0.17
PKNOX1-202ENST00000418336 NCS1P62166 190 aa16.1■□□□□ 0.17
PKNOX1-202ENST00000418336 CX3CL1P78423 397 aa16.1■□□□□ 0.17
PKNOX1-202ENST00000418336 EIF4EBP1Q13541 118 aaPredicted RBP16.1■□□□□ 0.17
PKNOX1-202ENST00000418336 C8orf86Q6ZUL3 223 aa16.1■□□□□ 0.17
PKNOX1-202ENST00000418336 MRPL41Q8IXM3 137 aaKnown RBP16.1■□□□□ 0.17
PKNOX1-202ENST00000418336 GVQW1Q8N7I0 195 aa16.1■□□□□ 0.17
PKNOX1-202ENST00000418336 SLC25A46Q96AG3 418 aa16.1■□□□□ 0.17
PKNOX1-202ENST00000418336 ANXA10Q9UJ72 324 aa16.1■□□□□ 0.17
PKNOX1-202ENST00000418336 IGKV1D-13A0A0B4J2D9 117 aa16.09■□□□□ 0.17
PKNOX1-202ENST00000418336 LINC00473A8K010 186 aa16.09■□□□□ 0.17
PKNOX1-202ENST00000418336 RRP9O43818 475 aaKnown RBP16.09■□□□□ 0.17
PKNOX1-202ENST00000418336 SOX15O60248 233 aa16.09■□□□□ 0.17
PKNOX1-202ENST00000418336 HLA-DQB1P01920 261 aa16.09■□□□□ 0.17
PKNOX1-202ENST00000418336 IGKV1-13P0DP09 117 aa16.09■□□□□ 0.17
PKNOX1-202ENST00000418336 PF4V1P10720 104 aa16.09■□□□□ 0.17
PKNOX1-202ENST00000418336 KHDC1LQ5JSQ8 128 aa16.09■□□□□ 0.17
PKNOX1-202ENST00000418336 CNIH2Q6PI25 160 aa16.09■□□□□ 0.17
PKNOX1-202ENST00000418336 HOGA1Q86XE5 327 aa16.09■□□□□ 0.17
PKNOX1-202ENST00000418336 RAX2Q96IS3 184 aa16.09■□□□□ 0.17
PKNOX1-202ENST00000418336 GINS4Q9BRT9 223 aa16.09■□□□□ 0.17
PKNOX1-202ENST00000418336 GON7Q9BXV9 100 aa16.09■□□□□ 0.17
PKNOX1-202ENST00000418336 NAA50Q9GZZ1 169 aaKnown RBP16.09■□□□□ 0.17
PKNOX1-202ENST00000418336 KLK15Q9H2R5 256 aa16.09■□□□□ 0.17
PKNOX1-202ENST00000418336 VCX3AQ9NNX9 186 aa16.09■□□□□ 0.17
PKNOX1-202ENST00000418336 WSB1Q9Y6I7 421 aa16.09■□□□□ 0.17
PKNOX1-202ENST00000418336 SRRM4A7MD48 611 aaKnown RBP16.08■□□□□ 0.16
PKNOX1-202ENST00000418336 H7C2Y5 167 aa16.08■□□□□ 0.16
PKNOX1-202ENST00000418336 IGLL1P15814 213 aa16.08■□□□□ 0.16
PKNOX1-202ENST00000418336 NFYAP23511 347 aaPredicted RBP16.08■□□□□ 0.16
PKNOX1-202ENST00000418336 SLC6A1P30531 599 aa16.08■□□□□ 0.16
PKNOX1-202ENST00000418336 DUTP33316 252 aaKnown RBP16.08■□□□□ 0.16
PKNOX1-202ENST00000418336 GNG2P59768 71 aa16.08■□□□□ 0.16
PKNOX1-202ENST00000418336 CROCCP3Q8IVE0 287 aa16.08■□□□□ 0.16
PKNOX1-202ENST00000418336 SNAPC3Q92966 411 aa16.08■□□□□ 0.16
PKNOX1-202ENST00000418336 KIAA1456Q9P272 454 aa16.08■□□□□ 0.16
PKNOX1-202ENST00000418336 ANAPC10Q9UM13 185 aa16.08■□□□□ 0.16
PKNOX1-202ENST00000418336 NUBP2Q9Y5Y2 271 aa16.08■□□□□ 0.16
PKNOX1-202ENST00000418336 ARPC1BO15143 372 aaKnown RBP16.07■□□□□ 0.16
PKNOX1-202ENST00000418336 XRCC3O43542 346 aa16.07■□□□□ 0.16
PKNOX1-202ENST00000418336 SPDEFO95238 335 aa16.07■□□□□ 0.16
PKNOX1-202ENST00000418336 VDAC1P21796 283 aa16.07■□□□□ 0.16
PKNOX1-202ENST00000418336 CDX1P47902 265 aaPredicted RBP16.07■□□□□ 0.16
PKNOX1-202ENST00000418336 VBP1P61758 197 aa16.07■□□□□ 0.16
PKNOX1-202ENST00000418336 CTF1Q16619 201 aa16.07■□□□□ 0.16
PKNOX1-202ENST00000418336 TMEM177Q53S58 311 aa16.07■□□□□ 0.16
PKNOX1-202ENST00000418336 ZNF660Q6AZW8 331 aaPredicted RBP16.07■□□□□ 0.16
PKNOX1-202ENST00000418336 ZNF695Q8IW36 515 aa16.07■□□□□ 0.16
PKNOX1-202ENST00000418336 KLHL30-AS1Q8NEE0 82 aa16.07■□□□□ 0.16
PKNOX1-202ENST00000418336 PARP11Q9NR21 331 aa16.07■□□□□ 0.16
PKNOX1-202ENST00000418336 SLC35D1Q9NTN3 355 aa16.07■□□□□ 0.16
PKNOX1-202ENST00000418336 OR2W1Q9Y3N9 320 aa16.07■□□□□ 0.16
PKNOX1-202ENST00000418336 TGP01266 2768 aa16.07■□□□□ 0.16
PKNOX1-202ENST00000418336 TRAV41A0A0B4J266 112 aa16.06■□□□□ 0.16
PKNOX1-202ENST00000418336 CTXN2P0C2S0 81 aa16.06■□□□□ 0.16
PKNOX1-202ENST00000418336 UBE2NLQ5JXB2 153 aa16.06■□□□□ 0.16
PKNOX1-202ENST00000418336 ZNF645Q8N7E2 425 aa16.06■□□□□ 0.16
PKNOX1-202ENST00000418336 DUX3Q96PT4 197 aa16.06■□□□□ 0.16
PKNOX1-202ENST00000418336 METTL1Q9UBP6 276 aaKnown RBP16.06■□□□□ 0.16
PKNOX1-202ENST00000418336 GABARAPO95166 117 aa16.05■□□□□ 0.16
PKNOX1-202ENST00000418336 CA2P00918 260 aa16.05■□□□□ 0.16
PKNOX1-202ENST00000418336 APOA2P02652 100 aa16.05■□□□□ 0.16
PKNOX1-202ENST00000418336 PF4P02776 101 aa16.05■□□□□ 0.16
PKNOX1-202ENST00000418336 PRB2P02812 416 aaPredicted RBP16.05■□□□□ 0.16
PKNOX1-202ENST00000418336 OR5H8P0DN80 308 aa16.05■□□□□ 0.16
PKNOX1-202ENST00000418336 CD33P20138 364 aa16.05■□□□□ 0.16
PKNOX1-202ENST00000418336 MYCNOSP40205 109 aa16.05■□□□□ 0.16
PKNOX1-202ENST00000418336 ALDH3B2P48448 385 aa16.05■□□□□ 0.16
PKNOX1-202ENST00000418336 BRWD1-AS2P59051 145 aa16.05■□□□□ 0.16
PKNOX1-202ENST00000418336 RPL30P62888 115 aaKnown RBP16.05■□□□□ 0.16
PKNOX1-202ENST00000418336 FHL3Q13643 280 aa16.05■□□□□ 0.16
PKNOX1-202ENST00000418336 CXorf66Q5JRM2 361 aaPredicted RBP16.05■□□□□ 0.16
PKNOX1-202ENST00000418336 ZNF562Q6V9R5 426 aa16.05■□□□□ 0.16
PKNOX1-202ENST00000418336 ANKRD13BQ86YJ7 626 aa16.05■□□□□ 0.16
PKNOX1-202ENST00000418336 ZNF491Q8N8L2 437 aa16.05■□□□□ 0.16
PKNOX1-202ENST00000418336 BVESQ8NE79 360 aa16.05■□□□□ 0.16
PKNOX1-202ENST00000418336 BEST4Q8NFU0 473 aa16.05■□□□□ 0.16
PKNOX1-202ENST00000418336 FLYWCH2Q96CP2 140 aaKnown RBP16.05■□□□□ 0.16
PKNOX1-202ENST00000418336 I3L521 148 aa16.04■□□□□ 0.16
PKNOX1-202ENST00000418336 SLC25A17O43808 307 aa16.04■□□□□ 0.16
PKNOX1-202ENST00000418336 EIF4EP06730 217 aaKnown RBP16.04■□□□□ 0.16
PKNOX1-202ENST00000418336 RPS16P62249 146 aaKnown RBP16.04■□□□□ 0.16
PKNOX1-202ENST00000418336 PJVKQ0ZLH3 352 aa16.04■□□□□ 0.16
PKNOX1-202ENST00000418336 DEFB136Q30KP8 78 aa16.04■□□□□ 0.16
PKNOX1-202ENST00000418336 FOXB2Q5VYV0 432 aa16.04■□□□□ 0.16
PKNOX1-202ENST00000418336 C4orf3Q8WVX3 66 aa16.04■□□□□ 0.16
PKNOX1-202ENST00000418336 KCTD12Q96CX2 325 aaKnown RBP16.04■□□□□ 0.16
PKNOX1-202ENST00000418336 RCC1LQ96I51 464 aaKnown RBP16.04■□□□□ 0.16
PKNOX1-202ENST00000418336 CLCC1Q96S66 551 aa16.04■□□□□ 0.16
PKNOX1-202ENST00000418336 FAM103A1Q9BTL3 118 aaKnown RBP16.04■□□□□ 0.16
PKNOX1-202ENST00000418336 DIABLOQ9NR28 239 aa16.04■□□□□ 0.16
PKNOX1-202ENST00000418336 TAS2R20P59543 309 aa16.03■□□□□ 0.16
PKNOX1-202ENST00000418336 ASPHD1Q5U4P2 390 aa16.03■□□□□ 0.16
PKNOX1-202ENST00000418336 OVCH2Q7RTZ1 564 aa16.03■□□□□ 0.16
PKNOX1-202ENST00000418336 SAMD12Q8N8I0 201 aa16.03■□□□□ 0.16
PKNOX1-202ENST00000418336 TSNAXQ99598 290 aaKnown RBP16.03■□□□□ 0.16
PKNOX1-202ENST00000418336 GNB4Q9HAV0 340 aa16.03■□□□□ 0.16
PKNOX1-202ENST00000418336 RBMX2Q9Y388 322 aaKnown RBP16.03■□□□□ 0.16
PKNOX1-202ENST00000418336 TNCP24821 2201 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms