RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 KIAA1644Q3SXP7 199 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 PMS2CLQ68D20 193 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 OCIAD1Q9NX40 245 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 PTPRZ1P23471 2315 aaPredicted RBP12.47□□□□□ -0.41
NCKIPSD-204ENST00000416649 KRASP01116 189 aa12.47□□□□□ -0.41
NCKIPSD-204ENST00000416649 RNF2Q99496 336 aa12.47□□□□□ -0.41
NCKIPSD-204ENST00000416649 IGKV1-6A0A0C4DH72 117 aa12.47□□□□□ -0.41
NCKIPSD-204ENST00000416649 A0A1B0GX78 115 aa12.47□□□□□ -0.41
NCKIPSD-204ENST00000416649 SIRPB1O00241 398 aa12.47□□□□□ -0.41
NCKIPSD-204ENST00000416649 PLPPR5Q32ZL2 321 aa12.47□□□□□ -0.41
NCKIPSD-204ENST00000416649 C1orf174Q8IYL3 243 aa12.47□□□□□ -0.41
NCKIPSD-204ENST00000416649 SAP25Q8TEE9 199 aa12.47□□□□□ -0.41
NCKIPSD-204ENST00000416649 HS3ST6Q96QI5 342 aa12.47□□□□□ -0.41
NCKIPSD-204ENST00000416649 PILRBQ9UKJ0 227 aa12.47□□□□□ -0.41
NCKIPSD-204ENST00000416649 KCNS2Q9ULS6 477 aa12.47□□□□□ -0.41
NCKIPSD-204ENST00000416649 DMXL1Q9Y485 3027 aa12.46□□□□□ -0.41
NCKIPSD-204ENST00000416649 SNURFLB1AK76 121 aa12.46□□□□□ -0.41
NCKIPSD-204ENST00000416649 SCRG1O75711 98 aa12.46□□□□□ -0.41
NCKIPSD-204ENST00000416649 IGLC2P0DOY2 106 aa12.46□□□□□ -0.41
NCKIPSD-204ENST00000416649 IGLC3P0DOY3 106 aa12.46□□□□□ -0.41
NCKIPSD-204ENST00000416649 TFF3Q07654 80 aa12.46□□□□□ -0.41
NCKIPSD-204ENST00000416649 MAJINQ3KP22 176 aa12.46□□□□□ -0.41
NCKIPSD-204ENST00000416649 FBLN7Q53RD9 439 aa12.46□□□□□ -0.41
NCKIPSD-204ENST00000416649 TRAV39A0A0B4J263 110 aa12.46□□□□□ -0.42
NCKIPSD-204ENST00000416649 NTF3P20783 257 aa12.46□□□□□ -0.42
NCKIPSD-204ENST00000416649 KMT5CQ86Y97 462 aa12.46□□□□□ -0.42
NCKIPSD-204ENST00000416649 ZNF441Q8N8Z8 693 aa12.46□□□□□ -0.42
NCKIPSD-204ENST00000416649 REPIN1Q9BWE0 567 aaKnown RBP12.46□□□□□ -0.42
NCKIPSD-204ENST00000416649 ULBP2Q9BZM5 246 aa12.46□□□□□ -0.42
NCKIPSD-204ENST00000416649 COX11Q9Y6N1 276 aa12.46□□□□□ -0.42
NCKIPSD-204ENST00000416649 EML6Q6ZMW3 1958 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 LY6G6EA0A0G2JKS1 128 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 MLNRO43193 412 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 COX5AP20674 150 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 TGFBR3Q03167 851 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 FOXL1Q12952 345 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 LDLRAD2Q5SZI1 272 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 OR5P3Q8WZ94 311 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 C10orf35Q96D05 121 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 NRN1Q9NPD7 142 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 R4GN57 208 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 U3KQA8 63 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 IGHV5-10-1A0A0J9YXX1 117 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 DHHO43323 396 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 IGKV1-39P01597 117 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 IGKV1D-39P04432 117 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 ZXDAP98168 799 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 PSG4Q00888 419 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 ACSF3Q4G176 576 aaPredicted RBP12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 GVINP1Q7Z2Y8 2422 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 C1orf210Q8IVY1 113 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 ST6GALNAC3Q8NDV1 305 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 LRFN3Q9BTN0 628 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 BET1LQ9NYM9 111 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 CFAP47Q6ZTR5 3102 aa12.45□□□□□ -0.42
NCKIPSD-204ENST00000416649 TRAV38-1A0A0B4J264 116 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 NPIPA2E9PIF3 369 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 NPIPA3F8WFD2 350 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 BCL3P20749 454 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 SLC35B1P78383 322 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 KRTCAP3Q53RY4 240 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 GCSAMLQ5JQS6 135 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 FAM19A2Q8N3H0 131 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 OR10G3Q8NGC4 313 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 OR10G8Q8NGN5 311 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 OR6C6A6NF89 314 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 WDR1O75083 606 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 IGKV1-5P01602 117 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 HIST3H3Q16695 136 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 SPINK9Q5DT21 86 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 SMIM15Q7Z3B0 74 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 IFI44Q8TCB0 444 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 LOXL4Q96JB6 756 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 UCN2Q96RP3 112 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 LAMA5O15230 3695 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 DNAJC13O75165 2243 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 K7EP13 123 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 GPX1P07203 203 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 CCL4P13236 92 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 CDC34P49427 236 aaPredicted RBP12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 FUT6P51993 359 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 YPEL3P61236 119 aaPredicted RBP12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 RDH5Q92781 318 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 NABP1Q96AH0 204 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 FAM122AQ96E09 287 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 GNB4Q9HAV0 340 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 CLN8Q9UBY8 286 aa12.44□□□□□ -0.42
NCKIPSD-204ENST00000416649 KIR2DS1A0A191URI9 304 aa12.43□□□□□ -0.42
NCKIPSD-204ENST00000416649 OTX1P32242 354 aaPredicted RBP12.43□□□□□ -0.42
NCKIPSD-204ENST00000416649 CTRLP40313 264 aa12.43□□□□□ -0.42
NCKIPSD-204ENST00000416649 KIR2DS4P43632 304 aa12.43□□□□□ -0.42
NCKIPSD-204ENST00000416649 KIR2DS1Q14954 304 aa12.43□□□□□ -0.42
NCKIPSD-204ENST00000416649 LCN12Q6JVE5 192 aa12.43□□□□□ -0.42
NCKIPSD-204ENST00000416649 ZFHX2Q9C0A1 2572 aaPredicted RBP12.43□□□□□ -0.42
NCKIPSD-204ENST00000416649 TRBV20OR9-2A0A075B6H5 130 aa12.43□□□□□ -0.42
NCKIPSD-204ENST00000416649 A8MXE2 369 aa12.43□□□□□ -0.42
NCKIPSD-204ENST00000416649 RBMXL2O75526 392 aaKnown RBP12.43□□□□□ -0.42
NCKIPSD-204ENST00000416649 TUSC2O75896 110 aa12.43□□□□□ -0.42
NCKIPSD-204ENST00000416649 SYNGR4O95473 234 aa12.43□□□□□ -0.42
NCKIPSD-204ENST00000416649 TMEM11P17152 192 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms