RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 RBM7Q9Y580 266 aaKnown RBP19.43■□□□□ 0.7
HLA-C-204ENST00000415537 SPDEFO95238 335 aa19.42■□□□□ 0.7
HLA-C-204ENST00000415537 OR8U9P0C7N5 309 aa19.42■□□□□ 0.7
HLA-C-204ENST00000415537 LINC00205P59089 165 aa19.42■□□□□ 0.7
HLA-C-204ENST00000415537 CD69Q07108 199 aa19.42■□□□□ 0.7
HLA-C-204ENST00000415537 ZNF562Q6V9R5 426 aa19.42■□□□□ 0.7
HLA-C-204ENST00000415537 PPP1R27Q86WC6 154 aa19.42■□□□□ 0.7
HLA-C-204ENST00000415537 MAFIPQ8WZ33 124 aa19.42■□□□□ 0.7
HLA-C-204ENST00000415537 GINS4Q9BRT9 223 aa19.42■□□□□ 0.7
HLA-C-204ENST00000415537 CABLES2Q9BTV7 478 aa19.42■□□□□ 0.7
HLA-C-204ENST00000415537 OR2D2Q9H210 308 aa19.42■□□□□ 0.7
HLA-C-204ENST00000415537 SLC35D1Q9NTN3 355 aa19.42■□□□□ 0.7
HLA-C-204ENST00000415537 ZNF230Q9UIE0 474 aaPredicted RBP19.42■□□□□ 0.7
HLA-C-204ENST00000415537 NUBP2Q9Y5Y2 271 aa19.42■□□□□ 0.7
HLA-C-204ENST00000415537 TRBV6-7A0A0A0MS04 114 aa19.41■□□□□ 0.7
HLA-C-204ENST00000415537 DIRAS3O95661 229 aa19.41■□□□□ 0.7
HLA-C-204ENST00000415537 CD40LGP29965 261 aa19.41■□□□□ 0.7
HLA-C-204ENST00000415537 GNB1P62873 340 aa19.41■□□□□ 0.7
HLA-C-204ENST00000415537 ARL6IP1Q15041 203 aa19.41■□□□□ 0.7
HLA-C-204ENST00000415537 ZNF260Q3ZCT1 412 aa19.41■□□□□ 0.7
HLA-C-204ENST00000415537 ACTBL2Q562R1 376 aa19.41■□□□□ 0.7
HLA-C-204ENST00000415537 PYHIN1Q6K0P9 492 aa19.41■□□□□ 0.7
HLA-C-204ENST00000415537 UNQ5815/PRO19632Q6UWF5 114 aa19.41■□□□□ 0.7
HLA-C-204ENST00000415537 FAM103A1Q9BTL3 118 aaKnown RBP19.41■□□□□ 0.7
HLA-C-204ENST00000415537 YTHDF1Q9BYJ9 559 aaKnown RBP19.41■□□□□ 0.7
HLA-C-204ENST00000415537 TXNL4BQ9NX01 149 aaKnown RBP19.41■□□□□ 0.7
HLA-C-204ENST00000415537 SMIM30A4D0T7 59 aa19.4■□□□□ 0.7
HLA-C-204ENST00000415537 SOX15O60248 233 aa19.4■□□□□ 0.7
HLA-C-204ENST00000415537 CA2P00918 260 aa19.4■□□□□ 0.7
HLA-C-204ENST00000415537 EGR2P11161 476 aaPredicted RBP19.4■□□□□ 0.7
HLA-C-204ENST00000415537 FGF9P31371 208 aaPredicted RBP19.4■□□□□ 0.7
HLA-C-204ENST00000415537 CBX3Q13185 183 aa19.4■□□□□ 0.7
HLA-C-204ENST00000415537 AKIRIN2Q53H80 203 aa19.4■□□□□ 0.7
HLA-C-204ENST00000415537 C19orf54Q5BKX5 351 aa19.4■□□□□ 0.7
HLA-C-204ENST00000415537 SDHAF2Q9NX18 166 aa19.4■□□□□ 0.7
HLA-C-204ENST00000415537 STUB1Q9UNE7 303 aa19.4■□□□□ 0.7
HLA-C-204ENST00000415537 GAB2Q9UQC2 676 aa19.4■□□□□ 0.7
HLA-C-204ENST00000415537 NOTOA8MTQ0 251 aa19.39■□□□□ 0.69
HLA-C-204ENST00000415537 SLC25A17O43808 307 aa19.39■□□□□ 0.69
HLA-C-204ENST00000415537 ECI1P42126 302 aa19.39■□□□□ 0.69
HLA-C-204ENST00000415537 SRSF7Q16629 238 aaKnown RBP eCLIP19.39■□□□□ 0.69
HLA-C-204ENST00000415537 NR2C2APQ86WQ0 139 aa19.39■□□□□ 0.69
HLA-C-204ENST00000415537 LFNGQ8NES3 379 aa19.39■□□□□ 0.69
HLA-C-204ENST00000415537 CASTOR1Q8WTX7 329 aa19.39■□□□□ 0.69
HLA-C-204ENST00000415537 B9D2Q9BPU9 175 aa19.39■□□□□ 0.69
HLA-C-204ENST00000415537 SSR3Q9UNL2 185 aa19.39■□□□□ 0.69
HLA-C-204ENST00000415537 TAGLNQ01995 201 aaKnown RBP19.38■□□□□ 0.69
HLA-C-204ENST00000415537 VAX1Q5SQQ9 334 aa19.38■□□□□ 0.69
HLA-C-204ENST00000415537 TPRA1Q86W33 373 aa19.38■□□□□ 0.69
HLA-C-204ENST00000415537 ARPC1AQ92747 370 aa19.38■□□□□ 0.69
HLA-C-204ENST00000415537 SCOCQ9UIL1 159 aa19.38■□□□□ 0.69
HLA-C-204ENST00000415537 LGALS7P47929 136 aa19.37■□□□□ 0.69
HLA-C-204ENST00000415537 INSL3P51460 131 aa19.37■□□□□ 0.69
HLA-C-204ENST00000415537 FXYD3Q14802 87 aa19.37■□□□□ 0.69
HLA-C-204ENST00000415537 CDNFQ49AH0 187 aa19.37■□□□□ 0.69
HLA-C-204ENST00000415537 ALX4Q9H161 411 aaPredicted RBP19.37■□□□□ 0.69
HLA-C-204ENST00000415537 LINC01619G3V211 115 aa19.36■□□□□ 0.69
HLA-C-204ENST00000415537 OVOL1O14753 267 aa19.36■□□□□ 0.69
HLA-C-204ENST00000415537 CNIH1O95406 144 aa19.36■□□□□ 0.69
HLA-C-204ENST00000415537 RTL8BQ17RB0 113 aa19.36■□□□□ 0.69
HLA-C-204ENST00000415537 ASPHD1Q5U4P2 390 aa19.36■□□□□ 0.69
HLA-C-204ENST00000415537 Q6ZS49 121 aa19.36■□□□□ 0.69
HLA-C-204ENST00000415537 GRPEL2Q8TAA5 225 aa19.36■□□□□ 0.69
HLA-C-204ENST00000415537 DCUN1D4Q92564 292 aa19.36■□□□□ 0.69
HLA-C-204ENST00000415537 HARBI1Q96MB7 349 aa19.36■□□□□ 0.69
HLA-C-204ENST00000415537 MS4A10Q96PG2 267 aa19.36■□□□□ 0.69
HLA-C-204ENST00000415537 PRR25Q96S07 402 aa19.36■□□□□ 0.69
HLA-C-204ENST00000415537 SLA2Q9H6Q3 261 aa19.36■□□□□ 0.69
HLA-C-204ENST00000415537 TPSG1Q9NRR2 321 aa19.36■□□□□ 0.69
HLA-C-204ENST00000415537 DAPK2Q9UIK4 370 aa19.36■□□□□ 0.69
HLA-C-204ENST00000415537 LGALS1P09382 135 aaKnown RBP19.35■□□□□ 0.69
HLA-C-204ENST00000415537 RRASP10301 218 aa19.35■□□□□ 0.69
HLA-C-204ENST00000415537 DTYMKP23919 212 aa19.35■□□□□ 0.69
HLA-C-204ENST00000415537 TPPP2P59282 170 aa19.35■□□□□ 0.69
HLA-C-204ENST00000415537 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.35■□□□□ 0.69
HLA-C-204ENST00000415537 ZNF355PQ9NSJ1 428 aa19.35■□□□□ 0.69
HLA-C-204ENST00000415537 ELF5Q9UKW6 265 aaPredicted RBP19.35■□□□□ 0.69
HLA-C-204ENST00000415537 RRP15Q9Y3B9 282 aaKnown RBP19.35■□□□□ 0.69
HLA-C-204ENST00000415537 SHOXO15266 292 aa19.34■□□□□ 0.69
HLA-C-204ENST00000415537 SCGNO76038 276 aa19.34■□□□□ 0.69
HLA-C-204ENST00000415537 SNRPBP14678 240 aaKnown RBP19.34■□□□□ 0.69
HLA-C-204ENST00000415537 H1FOOQ8IZA3 346 aaPredicted RBP19.34■□□□□ 0.69
HLA-C-204ENST00000415537 BVESQ8NE79 360 aa19.34■□□□□ 0.69
HLA-C-204ENST00000415537 ADTRPQ96IZ2 230 aa19.34■□□□□ 0.69
HLA-C-204ENST00000415537 ST6GALNAC5Q9BVH7 336 aa19.34■□□□□ 0.69
HLA-C-204ENST00000415537 IGLV2-23P01705 113 aa19.33■□□□□ 0.68
HLA-C-204ENST00000415537 IGHV3-11P01762 117 aa19.33■□□□□ 0.68
HLA-C-204ENST00000415537 TRGV3P03979 118 aa19.33■□□□□ 0.68
HLA-C-204ENST00000415537 PITPNAQ00169 270 aa19.33■□□□□ 0.68
HLA-C-204ENST00000415537 HACD4Q5VWC8 232 aa19.33■□□□□ 0.68
HLA-C-204ENST00000415537 C11orf87Q6NUJ2 197 aa19.33■□□□□ 0.68
HLA-C-204ENST00000415537 SFXN4Q6P4A7 337 aa19.33■□□□□ 0.68
HLA-C-204ENST00000415537 ZNF773Q6PK81 442 aa19.33■□□□□ 0.68
HLA-C-204ENST00000415537 ZNF429Q86V71 674 aa19.33■□□□□ 0.68
HLA-C-204ENST00000415537 IGKV1D-8A0A087WSZ0 117 aa19.32■□□□□ 0.68
HLA-C-204ENST00000415537 ARPC1BO15143 372 aaKnown RBP19.32■□□□□ 0.68
HLA-C-204ENST00000415537 LY86O95711 162 aa19.32■□□□□ 0.68
HLA-C-204ENST00000415537 CTXN2P0C2S0 81 aa19.32■□□□□ 0.68
HLA-C-204ENST00000415537 SLURP1P55000 103 aa19.32■□□□□ 0.68
HLA-C-204ENST00000415537 TMEM177Q53S58 311 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms