RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 CENPSQ8N2Z9 138 aa10.7□□□□□ -0.7
CNN3-203ENST00000415017 MINDY2Q8NBR6 621 aa10.7□□□□□ -0.7
CNN3-203ENST00000415017 ENKURQ8TC29 256 aa10.7□□□□□ -0.7
CNN3-203ENST00000415017 PIFOQ8TCI5 191 aa10.7□□□□□ -0.7
CNN3-203ENST00000415017 ADTRPQ96IZ2 230 aa10.7□□□□□ -0.7
CNN3-203ENST00000415017 MRPL20Q9BYC9 149 aaKnown RBP10.7□□□□□ -0.7
CNN3-203ENST00000415017 GSX1Q9H4S2 264 aaPredicted RBP10.7□□□□□ -0.7
CNN3-203ENST00000415017 NUDT15Q9NV35 164 aa10.7□□□□□ -0.7
CNN3-203ENST00000415017 SOX21Q9Y651 276 aaPredicted RBP10.7□□□□□ -0.7
CNN3-203ENST00000415017 IGHV3OR16-10A0A075B7F0 116 aa10.69□□□□□ -0.7
CNN3-203ENST00000415017 A0A1W2PRD5 423 aa10.69□□□□□ -0.7
CNN3-203ENST00000415017 A0A1W2PRF3 423 aa10.69□□□□□ -0.7
CNN3-203ENST00000415017 A0A1W2PRM7 423 aa10.69□□□□□ -0.7
CNN3-203ENST00000415017 H0YJW9 148 aa10.69□□□□□ -0.7
CNN3-203ENST00000415017 M0R1X1 148 aa10.69□□□□□ -0.7
CNN3-203ENST00000415017 ARPC1BO15143 372 aaKnown RBP10.69□□□□□ -0.7
CNN3-203ENST00000415017 RBFOX2O43251 390 aaKnown RBP eCLIP10.69□□□□□ -0.7
CNN3-203ENST00000415017 PEX14O75381 377 aa10.69□□□□□ -0.7
CNN3-203ENST00000415017 B3GALNT1O75752 331 aa10.69□□□□□ -0.7
CNN3-203ENST00000415017 IL5P05113 134 aa10.69□□□□□ -0.7
CNN3-203ENST00000415017 H2AFB2P0C5Z0 115 aa10.69□□□□□ -0.7
CNN3-203ENST00000415017 VSIG10L2P0DP72 767 aa10.69□□□□□ -0.7
CNN3-203ENST00000415017 CD1BP29016 333 aa10.69□□□□□ -0.7
CNN3-203ENST00000415017 THBS3P49746 956 aa10.69□□□□□ -0.7
CNN3-203ENST00000415017 CCDC144NLQ6NUI1 221 aa10.69□□□□□ -0.7
CNN3-203ENST00000415017 TBC1D26Q86UD7 250 aa10.69□□□□□ -0.7
CNN3-203ENST00000415017 THNSL2Q86YJ6 484 aa10.69□□□□□ -0.7
CNN3-203ENST00000415017 BCL6BQ8N143 479 aaPredicted RBP10.69□□□□□ -0.7
CNN3-203ENST00000415017 CCDC71LQ8N9Z2 235 aa10.69□□□□□ -0.7
CNN3-203ENST00000415017 RPEQ96AT9 228 aa10.69□□□□□ -0.7
CNN3-203ENST00000415017 GPHA2Q96T91 129 aa10.69□□□□□ -0.7
CNN3-203ENST00000415017 C14orf166Q9Y224 244 aaKnown RBP10.69□□□□□ -0.7
CNN3-203ENST00000415017 MC5RP33032 325 aa10.68□□□□□ -0.7
CNN3-203ENST00000415017 TAS2R31P59538 309 aa10.68□□□□□ -0.7
CNN3-203ENST00000415017 SSX2Q16385 188 aa10.68□□□□□ -0.7
CNN3-203ENST00000415017 ZNF585BQ52M93 769 aa10.68□□□□□ -0.7
CNN3-203ENST00000415017 PHLDA2Q53GA4 152 aa10.68□□□□□ -0.7
CNN3-203ENST00000415017 PLET1Q6UQ28 207 aa10.68□□□□□ -0.7
CNN3-203ENST00000415017 Q8N6K4 173 aa10.68□□□□□ -0.7
CNN3-203ENST00000415017 DRAXINQ8NBI3 349 aaPredicted RBP10.68□□□□□ -0.7
CNN3-203ENST00000415017 GLYATL2Q8WU03 294 aa10.68□□□□□ -0.7
CNN3-203ENST00000415017 ZNF48Q96MX3 618 aaPredicted RBP10.68□□□□□ -0.7
CNN3-203ENST00000415017 NAA60Q9H7X0 242 aa10.68□□□□□ -0.7
CNN3-203ENST00000415017 HILPDAQ9Y5L2 63 aa10.68□□□□□ -0.7
CNN3-203ENST00000415017 NIPBLQ6KC79 2804 aaeCLIP10.67□□□□□ -0.7
CNN3-203ENST00000415017 TRAV6A0A075B6T7 132 aa10.67□□□□□ -0.7
CNN3-203ENST00000415017 A0A0B4J293 547 aa10.67□□□□□ -0.7
CNN3-203ENST00000415017 RNF212BA8MTL3 300 aa10.67□□□□□ -0.7
CNN3-203ENST00000415017 INMT-MINDY4F8WBC2 141 aa10.67□□□□□ -0.7
CNN3-203ENST00000415017 H0Y980 276 aa10.67□□□□□ -0.7
CNN3-203ENST00000415017 TIMM23O14925 209 aa10.67□□□□□ -0.7
CNN3-203ENST00000415017 TNFSF12O43508 249 aa10.67□□□□□ -0.7
CNN3-203ENST00000415017 RLN1P04808 185 aa10.67□□□□□ -0.7
CNN3-203ENST00000415017 FBP1P09467 338 aa10.67□□□□□ -0.7
CNN3-203ENST00000415017 OR4E1P0C645 316 aa10.67□□□□□ -0.7
CNN3-203ENST00000415017 ANXA7P20073 488 aaKnown RBP10.67□□□□□ -0.7
CNN3-203ENST00000415017 UCP1P25874 307 aa10.67□□□□□ -0.7
CNN3-203ENST00000415017 REG1BP48304 166 aa10.67□□□□□ -0.7
CNN3-203ENST00000415017 ABCA11PQ4W5N1 156 aa10.67□□□□□ -0.7
CNN3-203ENST00000415017 TMEM177Q53S58 311 aa10.67□□□□□ -0.7
CNN3-203ENST00000415017 CADM3Q8N126 398 aa10.67□□□□□ -0.7
CNN3-203ENST00000415017 LRTM2Q8N967 370 aa10.67□□□□□ -0.7
CNN3-203ENST00000415017 CAPSLQ8WWF8 208 aa10.67□□□□□ -0.7
CNN3-203ENST00000415017 TP53RKQ96S44 253 aa10.67□□□□□ -0.7
CNN3-203ENST00000415017 CDC42EP3Q9UKI2 254 aa10.67□□□□□ -0.7
CNN3-203ENST00000415017 TEP1Q99973 2627 aaKnown RBP10.67□□□□□ -0.7
CNN3-203ENST00000415017 NF1P21359 2839 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 TEX13DA0A0J9YY54 714 aaPredicted RBP10.66□□□□□ -0.7
CNN3-203ENST00000415017 C3orf85A0A1B0GTC6 90 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 C9orf170A2RU37 121 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 C7orf66A4D0T2 115 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 PRAF2O60831 178 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 VENTXO95231 258 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 SFT2D2O95562 160 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 CDS2O95674 445 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 RRASP10301 218 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 HNF1AP20823 631 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 PAX6P26367 422 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 S100GP29377 79 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 KIR2DS2P43631 304 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 CATR1Q13166 79 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 PPP1R1AQ13522 171 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 TMEM187Q14656 261 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 DEFB112Q30KQ8 113 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 FBLN7Q53RD9 439 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 DHRS7BQ6IAN0 325 aaPredicted RBP10.66□□□□□ -0.7
CNN3-203ENST00000415017 Q6YL49 198 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 GLDNQ6ZMI3 551 aaPredicted RBP10.66□□□□□ -0.7
CNN3-203ENST00000415017 IL17RELQ6ZVW7 336 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 TMED4Q7Z7H5 227 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 PDPNQ86YL7 162 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 SGPP2Q8IWX5 399 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 CD300LFQ8TDQ1 290 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 TMEM56Q96MV1 263 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 RNF5Q99942 180 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 MS4A7Q9GZW8 240 aaPredicted RBP10.66□□□□□ -0.7
CNN3-203ENST00000415017 TMEM222Q9H0R3 208 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 LIN7CQ9NUP9 197 aaKnown RBP10.66□□□□□ -0.7
CNN3-203ENST00000415017 TMEM56-RWDD3S4R434 201 aa10.66□□□□□ -0.7
CNN3-203ENST00000415017 A0A0B4J2A0 478 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms