RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 OR11H7Q8NGC8 314 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 DDB2Q92466 427 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 HSD17B10Q99714 261 aaKnown RBP7.85□□□□□ -1.15
RIF1-202ENST00000414861 TMEM222Q9H0R3 208 aa7.85□□□□□ -1.15
RIF1-202ENST00000414861 TRAV40A0A0B4J280 105 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 LY6LH3BQJ8 138 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 CCSO14618 274 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 CT45A6P0DMU7 189 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 CT45A5P0DMU8 189 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 CT45A7P0DMV0 189 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 UCP1P25874 307 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 PRRX1P54821 245 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 ZNF585BQ52M93 769 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 ZNF66Q6ZN08 573 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 S1PR3Q99500 378 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 PHB2Q99623 299 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 MED28Q9H204 178 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 C7orf69Q9H7B7 122 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 LIN7CQ9NUP9 197 aaKnown RBP7.84□□□□□ -1.15
RIF1-202ENST00000414861 AUP1Q9Y679 476 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 TNCP24821 2201 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 CENPVL3A0A0U1RRI6 287 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 DBX1A6NMT0 343 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 IGKV1-39P01597 117 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 IGKV1D-39P04432 117 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 CD300CQ08708 224 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 RUSC1-AS1Q66K80 236 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 LIAT1Q6ZQX7 453 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 CHAC2Q8WUX2 184 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 KCNIP3Q9Y2W7 256 aa7.84□□□□□ -1.15
RIF1-202ENST00000414861 RNF212BA8MTL3 300 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 MPTX1A8MV57 137 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 ADAP1O75689 374 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 SULT1A3P0DMM9 295 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 SULT1A4P0DMN0 295 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 IGHV4-38-2P0DP08 117 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 HTR1DP28221 377 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 GZMKP49863 264 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 UBE2E1P51965 193 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 CATR1Q13166 79 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 SPAG16Q8N0X2 631 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 DYNAPQ8N1N2 210 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 PIP4P2Q8N4L2 257 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 AJUBAQ96IF1 538 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 GOSR2O14653 212 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 FCGR3BO75015 233 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 SIX6O95475 246 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 ANXA3P12429 323 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 GATA3P23771 443 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 IL3RAP26951 378 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 SAA4P35542 130 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 H2BFSP57053 126 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 KRTAP1-1Q07627 177 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 ZNF816Q0VGE8 651 aaPredicted RBP7.83□□□□□ -1.16
RIF1-202ENST00000414861 KLF17Q5JT82 389 aaPredicted RBP7.83□□□□□ -1.16
RIF1-202ENST00000414861 TPTE2P1Q5T6R2 138 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 TMEM268Q5VZI3 342 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 FAM71F2Q6NXP2 309 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 LYZL2Q7Z4W2 148 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 TGIF2LXQ8IUE1 241 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 SLC35G3Q8N808 338 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 COQ8AQ8NI60 647 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 RPEQ96AT9 228 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 WDR89Q96FK6 387 aaPredicted RBP7.83□□□□□ -1.16
RIF1-202ENST00000414861 NABP2Q9BQ15 211 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 MGAT4CQ9UBM8 478 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 AMMECR1Q9Y4X0 333 aaPredicted RBP7.83□□□□□ -1.16
RIF1-202ENST00000414861 HILPDAQ9Y5L2 63 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 PLXNB1O43157 2135 aa7.83□□□□□ -1.16
RIF1-202ENST00000414861 IGHV3-72A0A0B4J1Y9 119 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 A0A1W2PPI3 338 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 HMX3A6NHT5 357 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 H0YJW9 148 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 S1PR2O95136 353 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 CDS2O95674 445 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 IGKV1-16P04430 117 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 HOXB5P09067 269 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 THBS3P49746 956 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 BRD3OSQ6XYD6 125 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 SELENOHQ8IZQ5 122 aaKnown RBP7.82□□□□□ -1.16
RIF1-202ENST00000414861 LRTM2Q8N967 370 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 C18orf12Q96KH6 178 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 TMEM56Q96MV1 263 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 DPM3Q9P2X0 92 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 TMEM56-RWDD3S4R434 201 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 A0A0B4J2A0 478 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 A0A0G2JRQ6 117 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 NPFFO15130 113 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 SERPINE2P07093 398 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 C11orf88Q6PI97 169 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 OR5AN1Q8NGI8 311 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 SHPKQ9UHJ6 478 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 SOX21Q9Y651 276 aaPredicted RBP7.82□□□□□ -1.16
RIF1-202ENST00000414861 NAV3Q8IVL0 2385 aa7.82□□□□□ -1.16
RIF1-202ENST00000414861 IGHV1-69DA0A0B4J2H0 117 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 IGHV1-3A0A0C4DH29 117 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 LEUTXA8MZ59 168 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 IGHV1-69P01742 117 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 RPA2P15927 270 aa7.81□□□□□ -1.16
RIF1-202ENST00000414861 LPAR6P43657 344 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms