RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 PYCARDQ9ULZ3 195 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 SLC35A3Q9Y2D2 325 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 DOCK8Q8NF50 2099 aa2.97□□□□□ -1.93
BRCA1-204ENST00000412061 KIAA1671Q9BY89 1806 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 IGKV1-12A0A0C4DH73 117 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 OR5H14A6NHG9 310 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 TSTD3H0UI37 97 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 HMGB3O15347 200 aaKnown RBP2.96□□□□□ -1.93
BRCA1-204ENST00000412061 RBFOX2O43251 390 aaKnown RBP eCLIP2.96□□□□□ -1.93
BRCA1-204ENST00000412061 GSTZ1O43708 216 aaPredicted RBP2.96□□□□□ -1.93
BRCA1-204ENST00000412061 ZNF861PO60384 105 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 OR7C2O60412 319 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 APOMO95445 188 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 GPR75O95800 540 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 CCNE2O96020 404 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 IGKV1D-12P01611 117 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 HLA-DRB1P01911 266 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 GUSBP08236 651 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 ADRA2AP08913 450 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 NBEAP1P0C6P0 100 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 SULT1A3P0DMM9 295 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 SULT1A4P0DMN0 295 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 RPS20P60866 119 aaKnown RBP2.96□□□□□ -1.93
BRCA1-204ENST00000412061 HSPE1P61604 102 aaKnown RBP2.96□□□□□ -1.93
BRCA1-204ENST00000412061 UBE2SQ16763 222 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 DEFB116Q30KQ4 102 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 GRINAQ7Z429 371 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 LRP11Q86VZ4 500 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 PHF13Q86YI8 300 aaPredicted RBP2.96□□□□□ -1.93
BRCA1-204ENST00000412061 ZNF101Q8IZC7 436 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 STX19Q8N4C7 294 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 FER1L6-AS1Q8NA97 138 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 OR10A6Q8NH74 314 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 PEBP4Q96S96 227 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 TMEM147Q9BVK8 224 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 KCNIP2Q9NS61 270 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 RPS6KB2Q9UBS0 482 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 TBX21Q9UL17 535 aa2.96□□□□□ -1.93
BRCA1-204ENST00000412061 MRPS16Q9Y3D3 137 aaKnown RBP2.96□□□□□ -1.93
BRCA1-204ENST00000412061 DCCP43146 1447 aa2.96□□□□□ -1.94
BRCA1-204ENST00000412061 CEP170Q5SW79 1584 aa2.96□□□□□ -1.94
BRCA1-204ENST00000412061 AHDC1Q5TGY3 1603 aaPredicted RBP2.96□□□□□ -1.94
BRCA1-204ENST00000412061 DOCK3Q8IZD9 2030 aa2.96□□□□□ -1.94
BRCA1-204ENST00000412061 IGHV1-69-2A0A0G2JMI3 117 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 LINC00862A6NCI5 91 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 IZUMO1RA6ND01 250 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 K7ERS5 55 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 CRYZL1O95825 349 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 IGHG2P01859 326 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 GYPCP04921 128 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 OR5AC1P0C628 307 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 PPP1CCP36873 323 aaKnown RBP2.95□□□□□ -1.94
BRCA1-204ENST00000412061 BSPH1Q075Z2 132 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 PLPPR5Q32ZL2 321 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 NANOGP8Q6NSW7 305 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 SMARCD3Q6STE5 483 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 GOLT1AQ6ZVE7 132 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 AMN1Q8IY45 258 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 CYB561D1Q8N8Q1 229 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 C12orf29Q8N999 325 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 GDPD1Q8N9F7 314 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 CT55Q8WUE5 264 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 CMBLQ96DG6 245 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 GNPNAT1Q96EK6 184 aaPredicted RBP2.95□□□□□ -1.94
BRCA1-204ENST00000412061 PHYHIPLQ96FC7 376 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 CCL13Q99616 98 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 ZNF286AQ9HBT8 521 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 ZNF331Q9NQX6 463 aaPredicted RBP2.95□□□□□ -1.94
BRCA1-204ENST00000412061 PRTFDC1Q9NRG1 225 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 OR51B4Q9Y5P0 310 aa2.95□□□□□ -1.94
BRCA1-204ENST00000412061 IGHV3-43A0A0B4J1X8 118 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 TMEM150BA6NC51 233 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 NRASP01111 189 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 HRASP01112 189 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 KRASP01116 189 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 SERPINE1P05121 402 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 IFI30P13284 250 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 GABRA4P48169 554 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 NDPQ00604 133 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 TBPL2Q6SJ96 375 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 TICRRQ7Z2Z1 1910 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 SGPP2Q8IWX5 399 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 OR11G2Q8NGC1 345 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 OR9A2Q8NGT5 310 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 GNPDA2Q8TDQ7 276 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 RBPMSQ93062 196 aaKnown RBP2.94□□□□□ -1.94
BRCA1-204ENST00000412061 ELSPBP1Q96BH3 223 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 TSPAN32Q96QS1 320 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 KLF6Q99612 283 aaPredicted RBP2.94□□□□□ -1.94
BRCA1-204ENST00000412061 FAM60AQ9NP50 221 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 NUP205Q92621 2012 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 MYH2Q9UKX2 1941 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 NISCHQ9Y2I1 1504 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 MIA2Q96PC5 1412 aa2.94□□□□□ -1.94
BRCA1-204ENST00000412061 TRAPPC13A5PLN9 417 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 G3V2T6 193 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 COX7A2LO14548 114 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 MFSD11O43934 449 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 DHFRP00374 187 aa2.93□□□□□ -1.94
BRCA1-204ENST00000412061 HMGN1P05114 100 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms