RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 SRIP30626 198 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 C6orf15Q6UXA7 325 aaPredicted RBP3.98□□□□□ -1.77
PTPN13-202ENST00000411767 Q6ZSR9 355 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 FAM214BQ7L5A3 538 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 ATOH1Q92858 354 aaPredicted RBP3.98□□□□□ -1.77
PTPN13-202ENST00000411767 LPPQ93052 612 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 MMP25Q9NPA2 562 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 RNF7Q9UBF6 113 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 PPLO60437 1756 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 PPBPP02775 128 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 PFN1P07737 140 aaKnown RBP3.98□□□□□ -1.77
PTPN13-202ENST00000411767 HTN3P15516 51 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 SLC25A16P16260 332 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 ADRA1AP35348 466 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 LDLRAD2Q5SZI1 272 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 TPTE2P1Q5T6R2 138 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 TTC9BQ8N6N2 239 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 SRSF12Q8WXF0 261 aaKnown RBP3.98□□□□□ -1.77
PTPN13-202ENST00000411767 ST8SIA1Q92185 356 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 ZNF524Q96C55 264 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 IGSF5Q9NSI5 407 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 SETBP1Q9Y6X0 1596 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 PIK3C2BO00750 1634 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 FRG2CA6NGY1 282 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 TRDCB7Z8K6 153 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 NKAIN2Q5VXU1 208 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 PIANPQ8IYJ0 282 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 SHISA5Q8N114 240 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 ATP6V0BQ99437 205 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 RBPJLQ9UBG7 517 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 FRMPD1Q5SYB0 1578 aa3.98□□□□□ -1.77
PTPN13-202ENST00000411767 C15orf62A8K5M9 175 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 TMEM14DPA8MWL7 114 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 IGKCP01834 107 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 OPRM1P35372 400 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 FKBP1BP68106 108 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 ETDBQ3ZM63 59 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 C9orf47Q6ZRZ4 202 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 GLCCI1Q86VQ1 547 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 SAXO1Q8IYX7 474 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 TMEM171Q8WVE6 324 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 CHCHD5Q9BSY4 110 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 GLRX2Q9NS18 164 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 KAT6AQ92794 2004 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 A0A0G2JLM5 398 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 TRBV5-5A0A0J9YX44 114 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 A0A1W2PRD5 423 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 A0A1W2PRF3 423 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 A0A1W2PRM7 423 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 M0R381 172 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 CCL22O00626 93 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 FFAR1O14842 300 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 C1orf61Q13536 156 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 TMEM30BQ3MIR4 351 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 FGF14Q92915 247 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 SIGLEC10Q96LC7 697 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 VSTM2LQ96N03 204 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 RBM38Q9H0Z9 239 aaKnown RBP3.97□□□□□ -1.77
PTPN13-202ENST00000411767 RPP21Q9H633 154 aaKnown RBP3.97□□□□□ -1.77
PTPN13-202ENST00000411767 INSL5Q9Y5Q6 135 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 TRAV8-3A0A0A6YYJ7 113 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 CGB3P0DN86 165 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 ZIC1Q15915 447 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 ST3GAL2Q16842 350 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 SYS1Q8N2H4 156 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 CLDND2Q8NHS1 167 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 MS4A6EQ96DS6 147 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 NABP2Q9BQ15 211 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 PRSS37A4D1T9 235 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 CEACAM18A8MTB9 384 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 EFNB1P98172 346 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 MARVELD3Q96A59 401 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 MRGPRX3Q96LB0 322 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 ASCL2Q99929 193 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 MFRPQ9BY79 579 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 ZMAT3Q9HA38 289 aaKnown RBP3.97□□□□□ -1.77
PTPN13-202ENST00000411767 ZNF492Q9P255 531 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 MYOM1P52179 1685 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 ADGRB3O60242 1522 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 A0A1W2PRU2 124 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 ZNF561-AS1K7EIQ3 104 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 CFHP08603 1231 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 NRN1LQ496H8 165 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 C6orf226Q5I0X4 101 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 FKBP1CQ5VVH2 108 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 CXCL17Q6UXB2 119 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 LINC00696Q6ZRV3 163 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 OR11G2Q8NGC1 345 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 C4orf45Q96LM5 186 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 C9JCJ5 164 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 PRR35P0CG20 571 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 LAGE3Q14657 143 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 CLEC14AQ86T13 490 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 STHQ8IWL8 128 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 HIST1H2BAQ96A08 127 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 TM4SF19Q96DZ7 209 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 ABCA6Q8N139 1617 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 CA11O75493 328 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 HLA-DRB4P13762 266 aa3.97□□□□□ -1.77
PTPN13-202ENST00000411767 LMO1P25800 156 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms