RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 GADD45AP24522 165 aa11.21□□□□□ -0.61
MCF2L-210ENST00000409954 CLDN12P56749 244 aa11.21□□□□□ -0.61
MCF2L-210ENST00000409954 FXYD3Q14802 87 aa11.21□□□□□ -0.61
MCF2L-210ENST00000409954 SRSF7Q16629 238 aaKnown RBP eCLIP11.21□□□□□ -0.61
MCF2L-210ENST00000409954 OR6Q1Q8NGQ2 317 aa11.21□□□□□ -0.61
MCF2L-210ENST00000409954 OR10J5Q8NHC4 309 aa11.21□□□□□ -0.61
MCF2L-210ENST00000409954 NRG4Q8WWG1 115 aa11.21□□□□□ -0.61
MCF2L-210ENST00000409954 MS4A10Q96PG2 267 aa11.21□□□□□ -0.61
MCF2L-210ENST00000409954 ELOVL1Q9BW60 279 aa11.21□□□□□ -0.61
MCF2L-210ENST00000409954 ALX4Q9H161 411 aaPredicted RBP11.21□□□□□ -0.61
MCF2L-210ENST00000409954 SLC35D1Q9NTN3 355 aa11.21□□□□□ -0.61
MCF2L-210ENST00000409954 TENM3Q9P273 2699 aa11.2□□□□□ -0.62
MCF2L-210ENST00000409954 METTL21EPA6NDL7 271 aa11.2□□□□□ -0.62
MCF2L-210ENST00000409954 M0R1X1 148 aa11.2□□□□□ -0.62
MCF2L-210ENST00000409954 FABP7O15540 132 aa11.2□□□□□ -0.62
MCF2L-210ENST00000409954 CNIH1O95406 144 aa11.2□□□□□ -0.62
MCF2L-210ENST00000409954 BRI3O95415 125 aa11.2□□□□□ -0.62
MCF2L-210ENST00000409954 CA2P00918 260 aa11.2□□□□□ -0.62
MCF2L-210ENST00000409954 RRASP10301 218 aa11.2□□□□□ -0.62
MCF2L-210ENST00000409954 SLURP1P55000 103 aa11.2□□□□□ -0.62
MCF2L-210ENST00000409954 TPPP2P59282 170 aa11.2□□□□□ -0.62
MCF2L-210ENST00000409954 CBX3Q13185 183 aa11.2□□□□□ -0.62
MCF2L-210ENST00000409954 ARL6IP1Q15041 203 aa11.2□□□□□ -0.62
MCF2L-210ENST00000409954 MOGAT2Q3SYC2 334 aa11.2□□□□□ -0.62
MCF2L-210ENST00000409954 OR10R2Q8NGX6 335 aa11.2□□□□□ -0.62
MCF2L-210ENST00000409954 ARPC1AQ92747 370 aa11.2□□□□□ -0.62
MCF2L-210ENST00000409954 ASCL2Q99929 193 aa11.2□□□□□ -0.62
MCF2L-210ENST00000409954 FAM103A1Q9BTL3 118 aaKnown RBP11.2□□□□□ -0.62
MCF2L-210ENST00000409954 RANGRFQ9HD47 186 aaPredicted RBP11.2□□□□□ -0.62
MCF2L-210ENST00000409954 BLOC1S6Q9UL45 172 aa11.2□□□□□ -0.62
MCF2L-210ENST00000409954 DNAH9Q9NYC9 4486 aa11.19□□□□□ -0.62
MCF2L-210ENST00000409954 IGHV4OR15-8A0A075B7B6 117 aa11.19□□□□□ -0.62
MCF2L-210ENST00000409954 A0A087WW49 117 aa11.19□□□□□ -0.62
MCF2L-210ENST00000409954 TRBV6-7A0A0A0MS04 114 aa11.19□□□□□ -0.62
MCF2L-210ENST00000409954 TMEM272A0A1B0GTI8 110 aa11.19□□□□□ -0.62
MCF2L-210ENST00000409954 C3orf84H3BNL1 204 aa11.19□□□□□ -0.62
MCF2L-210ENST00000409954 BET1O15155 118 aa11.19□□□□□ -0.62
MCF2L-210ENST00000409954 SLC25A17O43808 307 aa11.19□□□□□ -0.62
MCF2L-210ENST00000409954 TRGV3P03979 118 aa11.19□□□□□ -0.62
MCF2L-210ENST00000409954 RAB6AP20340 208 aa11.19□□□□□ -0.62
MCF2L-210ENST00000409954 GALP22466 123 aa11.19□□□□□ -0.62
MCF2L-210ENST00000409954 HSPA13P48723 471 aa11.19□□□□□ -0.62
MCF2L-210ENST00000409954 PITPNAQ00169 270 aa11.19□□□□□ -0.62
MCF2L-210ENST00000409954 HES5Q5TA89 166 aa11.19□□□□□ -0.62
MCF2L-210ENST00000409954 CASTOR1Q8WTX7 329 aa11.19□□□□□ -0.62
MCF2L-210ENST00000409954 ZNF355PQ9NSJ1 428 aa11.19□□□□□ -0.62
MCF2L-210ENST00000409954 KCNK7Q9Y2U2 307 aa11.19□□□□□ -0.62
MCF2L-210ENST00000409954 COL7A1Q02388 2944 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 C13orf42A0A1B0GVH6 325 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 IFITM5A6NNB3 132 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 IGHV3-11P01762 117 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 CRYGBP07316 175 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 GSTT2P0CG29 244 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 GSTT2BP0CG30 244 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 GP9P14770 177 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 SPNP16150 400 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 ZP3P21754 424 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 TALDO1P37837 337 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 MAP2K4P45985 399 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 LINC00205P59089 165 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 TBCEQ15813 527 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-210ENST00000409954 RTL8BQ17RB0 113 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 IGSF11Q5DX21 431 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 ZNF367Q7RTV3 350 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 POC5Q8NA72 575 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 OR5T1Q8NG75 326 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 ADTRPQ96IZ2 230 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 CABLES2Q9BTV7 478 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 SDHAF2Q9NX18 166 aa11.18□□□□□ -0.62
MCF2L-210ENST00000409954 RBM7Q9Y580 266 aaKnown RBP11.18□□□□□ -0.62
MCF2L-210ENST00000409954 TRDV1A0A1B0GX56 115 aa11.17□□□□□ -0.62
MCF2L-210ENST00000409954 RAB27BO00194 218 aa11.17□□□□□ -0.62
MCF2L-210ENST00000409954 MRPS14O60783 128 aaKnown RBP11.17□□□□□ -0.62
MCF2L-210ENST00000409954 FCGR3AP08637 254 aa11.17□□□□□ -0.62
MCF2L-210ENST00000409954 AADACP22760 399 aa11.17□□□□□ -0.62
MCF2L-210ENST00000409954 MYL9P24844 172 aa11.17□□□□□ -0.62
MCF2L-210ENST00000409954 TATDN3Q17R31 274 aa11.17□□□□□ -0.62
MCF2L-210ENST00000409954 TMEM177Q53S58 311 aa11.17□□□□□ -0.62
MCF2L-210ENST00000409954 Q6ZS49 121 aa11.17□□□□□ -0.62
MCF2L-210ENST00000409954 TEX45Q8NA69 505 aa11.17□□□□□ -0.62
MCF2L-210ENST00000409954 GRPEL2Q8TAA5 225 aa11.17□□□□□ -0.62
MCF2L-210ENST00000409954 OR2D2Q9H210 308 aa11.17□□□□□ -0.62
MCF2L-210ENST00000409954 STUB1Q9UNE7 303 aa11.17□□□□□ -0.62
MCF2L-210ENST00000409954 SORL1Q92673 2214 aa11.16□□□□□ -0.62
MCF2L-210ENST00000409954 SHOXO15266 292 aa11.16□□□□□ -0.62
MCF2L-210ENST00000409954 IGLV2-23P01705 113 aa11.16□□□□□ -0.62
MCF2L-210ENST00000409954 CTXN2P0C2S0 81 aa11.16□□□□□ -0.62
MCF2L-210ENST00000409954 HIST1H1DP16402 221 aaKnown RBP11.16□□□□□ -0.62
MCF2L-210ENST00000409954 GNB3P16520 340 aa11.16□□□□□ -0.62
MCF2L-210ENST00000409954 RAB3BP20337 219 aa11.16□□□□□ -0.62
MCF2L-210ENST00000409954 ARFRP1Q13795 201 aa11.16□□□□□ -0.62
MCF2L-210ENST00000409954 ANKRD13BQ86YJ7 626 aa11.16□□□□□ -0.62
MCF2L-210ENST00000409954 SBSPONQ8IVN8 264 aa11.16□□□□□ -0.62
MCF2L-210ENST00000409954 USMG5Q96IX5 58 aa11.16□□□□□ -0.62
MCF2L-210ENST00000409954 GINS4Q9BRT9 223 aa11.16□□□□□ -0.62
MCF2L-210ENST00000409954 ZMAT4Q9H898 229 aa11.16□□□□□ -0.62
MCF2L-210ENST00000409954 NBEAL2Q6ZNJ1 2754 aa11.16□□□□□ -0.62
MCF2L-210ENST00000409954 MFNGO00587 321 aa11.15□□□□□ -0.62
MCF2L-210ENST00000409954 PJVKQ0ZLH3 352 aa11.15□□□□□ -0.62
MCF2L-210ENST00000409954 PLA2G7Q13093 441 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms