RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 C5orf64Q2M2E5 130 aa8.64□□□□□ -1.03
CHMP3-205ENST00000409810 ZNF383Q8NA42 475 aa8.64□□□□□ -1.03
CHMP3-205ENST00000409810 OR5AU1Q8NGC0 362 aa8.64□□□□□ -1.03
CHMP3-205ENST00000409810 DYNC2LI1Q8TCX1 351 aa8.64□□□□□ -1.03
CHMP3-205ENST00000409810 GPX8Q8TED1 209 aa8.64□□□□□ -1.03
CHMP3-205ENST00000409810 BORCS5Q969J3 196 aa8.64□□□□□ -1.03
CHMP3-205ENST00000409810 FLYWCH2Q96CP2 140 aaKnown RBP8.64□□□□□ -1.03
CHMP3-205ENST00000409810 C6orf62Q9GZU0 229 aaPredicted RBP8.64□□□□□ -1.03
CHMP3-205ENST00000409810 EHFQ9NZC4 300 aa8.64□□□□□ -1.03
CHMP3-205ENST00000409810 RSL24D1Q9UHA3 163 aaKnown RBP8.64□□□□□ -1.03
CHMP3-205ENST00000409810 ZNF107Q9UII5 783 aaPredicted RBP8.64□□□□□ -1.03
CHMP3-205ENST00000409810 J3QRK9 145 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 ZNF701M0R085 212 aaPredicted RBP8.63□□□□□ -1.03
CHMP3-205ENST00000409810 RRHO14718 337 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 PROP1O75360 226 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 HLA-DRB1P01911 266 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 OPN1MWP04001 364 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 FCER2P06734 321 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 CSF1P09603 554 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 OPN1MW2P0DN77 364 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 OPN1MW3P0DN78 364 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 DUTP33316 252 aaKnown RBP8.63□□□□□ -1.03
CHMP3-205ENST00000409810 RPS16P62249 146 aaKnown RBP8.63□□□□□ -1.03
CHMP3-205ENST00000409810 MRPS10P82664 201 aaKnown RBP8.63□□□□□ -1.03
CHMP3-205ENST00000409810 MSMO1Q15800 293 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 ACTBL2Q562R1 376 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 PRR31Q5SQ13 230 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 KCTD9Q7L273 389 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 NDUFA11Q86Y39 141 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 LAX1Q8IWV1 398 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 STPG2Q8N412 459 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 C11orf44Q8N8P7 122 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 ZBTB34Q8NCN2 500 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 WIPF2Q8TF74 440 aaPredicted RBP8.63□□□□□ -1.03
CHMP3-205ENST00000409810 GIMAP1Q8WWP7 306 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 HSD17B10Q99714 261 aaKnown RBP8.63□□□□□ -1.03
CHMP3-205ENST00000409810 RBMX2Q9Y388 322 aaKnown RBP8.63□□□□□ -1.03
CHMP3-205ENST00000409810 PRELID3BQ9Y3B1 194 aa8.63□□□□□ -1.03
CHMP3-205ENST00000409810 IGKV1D-13A0A0B4J2D9 117 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 SHOXO15266 292 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 PMP2P02689 132 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 IGKV1-16P04430 117 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 IGKV1-13P0DP09 117 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 CD28P10747 220 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 VDAC1P21796 283 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 AADACP22760 399 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 CNTFRP26992 372 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 LGALS7P47929 136 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 FXYD4P59646 89 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 DYRK1AQ13627 763 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 PYHIN1Q6K0P9 492 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 LIN54Q6MZP7 749 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 OVCH2Q7RTZ1 564 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 COMMD1Q8N668 190 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 SECTM1Q8WVN6 248 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 C5orf30Q96GV9 206 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 DIRAS2Q96HU8 199 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 RITA1Q96K30 269 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 HARBI1Q96MB7 349 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 SLC5A7Q9GZV3 580 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 MMP27Q9H306 513 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 METTL1Q9UBP6 276 aaKnown RBP8.62□□□□□ -1.03
CHMP3-205ENST00000409810 ZNF580Q9UK33 172 aa8.62□□□□□ -1.03
CHMP3-205ENST00000409810 TCRBV4S1A1TA0A5B7 111 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 LINC00473A8K010 186 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 CTDSP2O14595 271 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 HLA-DMAP28067 261 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 HRH1P35367 487 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 KIR2DS2P43631 304 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 LINC00205P59089 165 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 TSPAN5P62079 268 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 CATR1Q13166 79 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 IL18Q14116 193 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 NSUN5P1Q3KNT7 163 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 VMA21Q3ZAQ7 101 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 TMEM177Q53S58 311 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 KHDC1LQ5JSQ8 128 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 DHRS11Q6UWP2 260 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 ZNF66Q6ZN08 573 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 BVESQ8NE79 360 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 OR4F17Q8NGA8 305 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 OR6F1Q8NGZ6 308 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 MCFD2Q8NI22 146 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 OSR1Q8TAX0 266 aaPredicted RBP8.61□□□□□ -1.03
CHMP3-205ENST00000409810 FCAMRQ8WWV6 532 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 DDB2Q92466 427 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 NOL4LQ96MY1 436 aaPredicted RBP8.61□□□□□ -1.03
CHMP3-205ENST00000409810 OR4F4Q96R69 305 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 CITED2Q99967 270 aaPredicted RBP8.61□□□□□ -1.03
CHMP3-205ENST00000409810 HSPB9Q9BQS6 159 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 ZNF2Q9BSG1 426 aaPredicted RBP8.61□□□□□ -1.03
CHMP3-205ENST00000409810 SLIRPQ9GZT3 109 aaKnown RBP8.61□□□□□ -1.03
CHMP3-205ENST00000409810 MIXL1Q9H2W2 232 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 OR51J1Q9H342 316 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 FBXL15Q9H469 300 aa8.61□□□□□ -1.03
CHMP3-205ENST00000409810 TSSC4Q9Y5U2 329 aaPredicted RBP8.61□□□□□ -1.03
CHMP3-205ENST00000409810 TNCP24821 2201 aa8.6□□□□□ -1.03
CHMP3-205ENST00000409810 IGHV7-81A0A0B4J1V7 117 aa8.6□□□□□ -1.03
CHMP3-205ENST00000409810 GABARAPH6UMI1 98 aa8.6□□□□□ -1.03
CHMP3-205ENST00000409810 SLC25A17O43808 307 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms