RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 LOC100130705A0A1B0GUX0 176 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 MDFIC2A0A1B0GVS7 189 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 IRGMA1A4Y4 181 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 RFPL4AA6NLU0 287 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 RFPL4AL1F8VTS6 287 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 MELTFP08582 738 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 HTR1AP08908 422 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 GABRA2P47869 451 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 TMEM50BP56557 158 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 ERVK11-1P61568 191 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 ARF6P62330 175 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 LPCAT4Q643R3 524 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 VMO1Q7Z5L0 202 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 Q8IYB0 196 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 PACRGLQ8N7B6 248 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 RHOXF1Q8NHV9 184 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 NPRL2Q8WTW4 380 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 IL1F10Q8WWZ1 152 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 H1FXQ92522 213 aaKnown RBP4.79□□□□□ -1.64
LSM5-203ENST00000409782 BORCS8Q96FH0 119 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 CEP19Q96LK0 163 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 SLC29A1Q99808 456 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 ELL3Q9HB65 397 aaPredicted RBP4.79□□□□□ -1.64
LSM5-203ENST00000409782 NEK6Q9HC98 313 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 PLCXD1Q9NUJ7 323 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 MLXQ9UH92 298 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 HHLA2Q9UM44 414 aa4.79□□□□□ -1.64
LSM5-203ENST00000409782 RPL36Q9Y3U8 105 aaKnown RBP4.79□□□□□ -1.64
LSM5-203ENST00000409782 IGKV1-27A0A075B6S5 117 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 A0A1W2PPE3 182 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 TMEM212A6NML5 194 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 OR4C45A6NMZ5 311 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 RNASEK-C17orf49H0YIS7 233 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 NPFFO15130 113 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 CYB5AP00167 134 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 TFF1P04155 84 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 FBP1P09467 338 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 ATF1P18846 271 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 ATP1B3P54709 279 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 OR12D2P58182 307 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 RND3P61587 244 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 RPL36AP83881 106 aaKnown RBP4.78□□□□□ -1.64
LSM5-203ENST00000409782 ZNF876PQ49A33 203 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 KLHL22Q53GT1 634 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 DMRTC1Q5HYR2 192 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 PVRIGQ6DKI7 326 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 C16orf87Q6PH81 154 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 SLC25A26Q70HW3 274 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 H2BFWTQ7Z2G1 175 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 CALHM1Q8IU99 346 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 MKXQ8IYA7 352 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 CD177Q8N6Q3 437 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 Q8N7P7 452 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 C3orf56Q8N813 242 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 ZNF555Q8NEP9 628 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 APH1BQ8WW43 257 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 TAF15Q92804 592 aaKnown RBP eCLIP4.78□□□□□ -1.64
LSM5-203ENST00000409782 TNFRSF14Q92956 283 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 ADAT3Q96EY9 351 aaPredicted RBP4.78□□□□□ -1.64
LSM5-203ENST00000409782 ZNF488Q96MN9 340 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 OPALINQ96PE5 141 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 SIRT7Q9NRC8 400 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 C19orf12Q9NSK7 152 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 ZNRD1Q9P1U0 126 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 GAB2Q9UQC2 676 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 MMP24Q9Y5R2 645 aa4.78□□□□□ -1.64
LSM5-203ENST00000409782 SOX21Q9Y651 276 aaPredicted RBP4.78□□□□□ -1.64
LSM5-203ENST00000409782 IGKV1-9A0A0C4DH69 117 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 A0A1B0GUS0 222 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 BTBD17A6NE02 478 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 A6NIN4 97 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 H3BSH0 61 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 J3QLW9 94 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 K7N7A8 449 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 ZNF737O75373 536 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 HAND1O96004 215 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 RBP4P02753 201 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 OCM2P0CE71 109 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 OCMP0CE72 109 aaPredicted RBP4.77□□□□□ -1.65
LSM5-203ENST00000409782 ZNF19P17023 458 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 POU3F4P49335 361 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 RBP2P50120 134 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 UBE2E1P51965 193 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 MFAP2P55001 183 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 RPL31P62899 125 aaKnown RBP4.77□□□□□ -1.65
LSM5-203ENST00000409782 KLRD1Q13241 179 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 IL18R1Q13478 541 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 MED21Q13503 144 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 ZNF146Q15072 292 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 AANATQ16613 207 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 SPIN3Q5JUX0 258 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 ZNF691Q5VV52 312 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 GDPGP1Q6ZNW5 385 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 ANGPTL5Q86XS5 388 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 SAXO1Q8IYX7 474 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 RDH10Q8IZV5 341 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 ZNF676Q8N7Q3 588 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 ASCC1Q8N9N2 400 aaKnown RBP4.77□□□□□ -1.65
LSM5-203ENST00000409782 OR4C5Q8NGB2 326 aa4.77□□□□□ -1.65
LSM5-203ENST00000409782 OR51A4Q8NGJ6 313 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms