RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 CLCC1Q96S66 551 aa11.4□□□□□ -0.58
CBX3-203ENST00000409747 FAM103A1Q9BTL3 118 aaKnown RBP11.4□□□□□ -0.58
CBX3-203ENST00000409747 CENPOQ9BU64 300 aa11.4□□□□□ -0.58
CBX3-203ENST00000409747 GAB2Q9UQC2 676 aa11.4□□□□□ -0.58
CBX3-203ENST00000409747 NBEAL2Q6ZNJ1 2754 aa11.4□□□□□ -0.58
CBX3-203ENST00000409747 TMEM272A0A1B0GTI8 110 aa11.4□□□□□ -0.58
CBX3-203ENST00000409747 M0R1X1 148 aa11.4□□□□□ -0.58
CBX3-203ENST00000409747 FABP7O15540 132 aa11.4□□□□□ -0.58
CBX3-203ENST00000409747 PROP1O75360 226 aa11.4□□□□□ -0.58
CBX3-203ENST00000409747 MYL9P24844 172 aa11.4□□□□□ -0.58
CBX3-203ENST00000409747 SLURP1P55000 103 aa11.4□□□□□ -0.58
CBX3-203ENST00000409747 TAGLNQ01995 201 aaKnown RBP11.4□□□□□ -0.58
CBX3-203ENST00000409747 HES5Q5TA89 166 aa11.4□□□□□ -0.58
CBX3-203ENST00000409747 LFNGQ8NES3 379 aa11.4□□□□□ -0.58
CBX3-203ENST00000409747 OR10J5Q8NHC4 309 aa11.4□□□□□ -0.58
CBX3-203ENST00000409747 CASTOR1Q8WTX7 329 aa11.4□□□□□ -0.58
CBX3-203ENST00000409747 SLC35D1Q9NTN3 355 aa11.4□□□□□ -0.58
CBX3-203ENST00000409747 IGHV4OR15-8A0A075B7B6 117 aa11.39□□□□□ -0.59
CBX3-203ENST00000409747 A0A087WW49 117 aa11.39□□□□□ -0.59
CBX3-203ENST00000409747 TRAV1-2A0A0B4J238 106 aa11.39□□□□□ -0.59
CBX3-203ENST00000409747 H3BUA1 57 aa11.39□□□□□ -0.59
CBX3-203ENST00000409747 BET1O15155 118 aa11.39□□□□□ -0.59
CBX3-203ENST00000409747 SLC25A17O43808 307 aa11.39□□□□□ -0.59
CBX3-203ENST00000409747 HSPB1P04792 205 aaKnown RBP11.39□□□□□ -0.59
CBX3-203ENST00000409747 FCGR3AP08637 254 aa11.39□□□□□ -0.59
CBX3-203ENST00000409747 MAP2K4P45985 399 aa11.39□□□□□ -0.59
CBX3-203ENST00000409747 LGALS7P47929 136 aa11.39□□□□□ -0.59
CBX3-203ENST00000409747 PITPNAQ00169 270 aa11.39□□□□□ -0.59
CBX3-203ENST00000409747 CABLES2Q9BTV7 478 aa11.39□□□□□ -0.59
CBX3-203ENST00000409747 OR2D2Q9H210 308 aa11.39□□□□□ -0.59
CBX3-203ENST00000409747 TPSG1Q9NRR2 321 aa11.39□□□□□ -0.59
CBX3-203ENST00000409747 TRGV3P03979 118 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 RAB6AP20340 208 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 FXYD3Q14802 87 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 ACSM6Q6P461 480 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 OR10R2Q8NGX6 335 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 GRPEL2Q8TAA5 225 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 TMEM68Q96MH6 324 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 MS4A10Q96PG2 267 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 A0A0G2JLM5 398 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 METTL21EPA6NDL7 271 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 IFITM5A6NNB3 132 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 CNIH1O95406 144 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 IGHV3-11P01762 117 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 ARL6IP1Q15041 203 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 RTL8BQ17RB0 113 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 IZUMO2Q6UXV1 221 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 POC5Q8NA72 575 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 RHOVQ96L33 236 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 CNBD2Q96M20 576 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 HARBI1Q96MB7 349 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 OR4C12Q96R67 309 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 ELOVL1Q9BW60 279 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 NDUFB11Q9NX14 153 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 KCNK7Q9Y2U2 307 aa11.38□□□□□ -0.59
CBX3-203ENST00000409747 TRBV6-7A0A0A0MS04 114 aa11.37□□□□□ -0.59
CBX3-203ENST00000409747 C13orf42A0A1B0GVH6 325 aa11.37□□□□□ -0.59
CBX3-203ENST00000409747 MFNGO00587 321 aa11.37□□□□□ -0.59
CBX3-203ENST00000409747 RRASP10301 218 aa11.37□□□□□ -0.59
CBX3-203ENST00000409747 HIST1H1DP16402 221 aaKnown RBP11.37□□□□□ -0.59
CBX3-203ENST00000409747 GALP22466 123 aa11.37□□□□□ -0.59
CBX3-203ENST00000409747 SSX1Q16384 188 aa11.37□□□□□ -0.59
CBX3-203ENST00000409747 MOGAT2Q3SYC2 334 aa11.37□□□□□ -0.59
CBX3-203ENST00000409747 ASCL2Q99929 193 aa11.37□□□□□ -0.59
CBX3-203ENST00000409747 GINS4Q9BRT9 223 aa11.37□□□□□ -0.59
CBX3-203ENST00000409747 ZNF355PQ9NSJ1 428 aa11.37□□□□□ -0.59
CBX3-203ENST00000409747 SDHAF2Q9NX18 166 aa11.37□□□□□ -0.59
CBX3-203ENST00000409747 RBM7Q9Y580 266 aaKnown RBP11.37□□□□□ -0.59
CBX3-203ENST00000409747 GP9P14770 177 aa11.36□□□□□ -0.59
CBX3-203ENST00000409747 SPNP16150 400 aa11.36□□□□□ -0.59
CBX3-203ENST00000409747 GNB3P16520 340 aa11.36□□□□□ -0.59
CBX3-203ENST00000409747 RAB3BP20337 219 aa11.36□□□□□ -0.59
CBX3-203ENST00000409747 ZP3P21754 424 aa11.36□□□□□ -0.59
CBX3-203ENST00000409747 TALDO1P37837 337 aa11.36□□□□□ -0.59
CBX3-203ENST00000409747 LINC00205P59089 165 aa11.36□□□□□ -0.59
CBX3-203ENST00000409747 SRSF7Q16629 238 aaKnown RBP eCLIP11.36□□□□□ -0.59
CBX3-203ENST00000409747 IGSF11Q5DX21 431 aa11.36□□□□□ -0.59
CBX3-203ENST00000409747 ADTRPQ96IZ2 230 aa11.36□□□□□ -0.59
CBX3-203ENST00000409747 RANGRFQ9HD47 186 aaPredicted RBP11.36□□□□□ -0.59
CBX3-203ENST00000409747 A0A075B6Q4 140 aa11.35□□□□□ -0.59
CBX3-203ENST00000409747 TRDV1A0A1B0GX56 115 aa11.35□□□□□ -0.59
CBX3-203ENST00000409747 SHOXO15266 292 aa11.35□□□□□ -0.59
CBX3-203ENST00000409747 GSTT2P0CG29 244 aa11.35□□□□□ -0.59
CBX3-203ENST00000409747 GSTT2BP0CG30 244 aa11.35□□□□□ -0.59
CBX3-203ENST00000409747 OR10A3P58181 314 aa11.35□□□□□ -0.59
CBX3-203ENST00000409747 PLA2G7Q13093 441 aa11.35□□□□□ -0.59
CBX3-203ENST00000409747 ARFRP1Q13795 201 aa11.35□□□□□ -0.59
CBX3-203ENST00000409747 TMEM177Q53S58 311 aa11.35□□□□□ -0.59
CBX3-203ENST00000409747 STUB1Q9UNE7 303 aa11.35□□□□□ -0.59
CBX3-203ENST00000409747 SORL1Q92673 2214 aa11.35□□□□□ -0.59
CBX3-203ENST00000409747 RAB27BO00194 218 aa11.35□□□□□ -0.59
CBX3-203ENST00000409747 BRI3O95415 125 aa11.35□□□□□ -0.59
CBX3-203ENST00000409747 IGLV2-23P01705 113 aa11.35□□□□□ -0.59
CBX3-203ENST00000409747 AADACP22760 399 aa11.35□□□□□ -0.59
CBX3-203ENST00000409747 Q6ZS49 121 aa11.35□□□□□ -0.59
CBX3-203ENST00000409747 RYR3Q15413 4870 aa11.34□□□□□ -0.59
CBX3-203ENST00000409747 MRPS14O60783 128 aaKnown RBP11.34□□□□□ -0.59
CBX3-203ENST00000409747 CRYGBP07316 175 aa11.34□□□□□ -0.59
CBX3-203ENST00000409747 GABARAPL2P60520 117 aa11.34□□□□□ -0.59
CBX3-203ENST00000409747 VMA21Q3ZAQ7 101 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms