RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 GPR61Q9BZJ8 451 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 HSPB7Q9UBY9 170 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 TET1Q8NFU7 2136 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 OR4C45A6NMZ5 311 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 BTG1P62324 171 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 TEX29Q8N6K0 151 aa7.26□□□□□ -1.25
SCN9A-203ENST00000409672 TCRBV5S1A1TA0A578 114 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 LGALS3P17931 250 aaKnown RBP7.25□□□□□ -1.25
SCN9A-203ENST00000409672 NPPCP23582 126 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 PLPPR5Q32ZL2 321 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 SLC35E3Q7Z769 313 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 LPAR3Q9UBY5 353 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 CEP250Q9BV73 2442 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 CD74P04233 296 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 CD1AP06126 327 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 NUTF2P61970 127 aaKnown RBP7.25□□□□□ -1.25
SCN9A-203ENST00000409672 DNASE2BQ8WZ79 361 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 MRPL24Q96A35 216 aaKnown RBP7.25□□□□□ -1.25
SCN9A-203ENST00000409672 OR2W1Q9Y3N9 320 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 CACNA1BQ00975 2339 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 CHD3Q12873 2000 aaKnown RBP7.25□□□□□ -1.25
SCN9A-203ENST00000409672 FUCA1P04066 466 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 LIPFP07098 398 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 CELA3AP09093 270 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 GREB1Q4ZG55 1949 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 FAM181AQ8N9Y4 354 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 SRXN1Q9BYN0 137 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 ARRDC5A6NEK1 342 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 C1QBP02746 253 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 ZNF25P17030 456 aaPredicted RBP7.25□□□□□ -1.25
SCN9A-203ENST00000409672 GPR183P32249 361 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 OR4D11Q8NGI4 311 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 FAM131CQ96AQ9 280 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 SLC25A33Q9BSK2 321 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 FGF20Q9NP95 211 aaPredicted RBP7.25□□□□□ -1.25
SCN9A-203ENST00000409672 CXorf1O96002 111 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 DLK1P80370 383 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 NCMAPQ5T1S8 102 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 DPPA3Q6W0C5 159 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 ASCL4Q6XD76 172 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 MMP26Q9NRE1 261 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 IL20Q9NYY1 176 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 IDI2-AS1Q9NZ38 188 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 SPTBN2O15020 2390 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 COL5A1-AS1Q5SY13 56 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 C1QL2Q7Z5L3 287 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 PPP1R32Q7Z5V6 425 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 C8orf46Q8TAG6 207 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 ZNF501Q96CX3 271 aaPredicted RBP7.25□□□□□ -1.25
SCN9A-203ENST00000409672 CENPVL1A0A0U1RR11 272 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 RBFOX3A6NFN3 312 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 F12P00748 615 aaPredicted RBP7.25□□□□□ -1.25
SCN9A-203ENST00000409672 MMP9P14780 707 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 OR10J1P30954 320 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 FAM209BQ5JX69 171 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 ARRDC1Q8N5I2 433 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 KLF14Q8TD94 323 aaPredicted RBP7.25□□□□□ -1.25
SCN9A-203ENST00000409672 DUSP21Q9H596 190 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 PXMP4Q9Y6I8 212 aa7.25□□□□□ -1.25
SCN9A-203ENST00000409672 KMT2EQ8IZD2 1858 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 TRAV20A0A0B4J274 112 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 J3QT63 122 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 LMX1BO60663 402 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 KBTBD11O94819 623 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 SMAGPQ0VAQ4 97 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 LDLRAD2Q5SZI1 272 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 ZNF236Q9UL36 1845 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 GNLYP22749 145 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 APOBEC3AP31941 199 aaPredicted RBP7.24□□□□□ -1.25
SCN9A-203ENST00000409672 LHFPL4Q7Z7J7 247 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 LURAP1LQ8IV03 231 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 HIST1H4GQ99525 98 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 NPFFR1Q9GZQ6 430 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 TOLLIPQ9H0E2 274 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 ELOBQ15370 118 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 SF3B5Q9BWJ5 86 aaKnown RBP7.24□□□□□ -1.25
SCN9A-203ENST00000409672 MANBALQ9NQG1 85 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 GBF1Q92538 1859 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 TRAV12-3A0A0B4J271 114 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 TMEM218A2RU14 115 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 IGKV1D-16P01601 117 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 MPV17P39210 176 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 SRSF12Q8WXF0 261 aaKnown RBP7.24□□□□□ -1.25
SCN9A-203ENST00000409672 PATJQ8NI35 1801 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 A6NDN8 102 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 RCC1P18754 421 aaPredicted RBP7.24□□□□□ -1.25
SCN9A-203ENST00000409672 MVDP53602 400 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 C18orf15Q96N68 181 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 IGHV3-73A0A0B4J1V6 119 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 ISLRO14498 428 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 CA2P00918 260 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 RPL8P62917 257 aaKnown RBP7.24□□□□□ -1.25
SCN9A-203ENST00000409672 FOXA2Q9Y261 457 aaPredicted RBP7.24□□□□□ -1.25
SCN9A-203ENST00000409672 TNFRSF18Q9Y5U5 241 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 C17orf51A8MQB3 221 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 SAP30O75446 220 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 ATG4DQ86TL0 474 aaPredicted RBP7.24□□□□□ -1.25
SCN9A-203ENST00000409672 CALHM1Q8IU99 346 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 KIR3DL3Q8N743 410 aa7.24□□□□□ -1.25
SCN9A-203ENST00000409672 ZPLD1Q8TCW7 415 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms