RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 VPREB3Q9UKI3 123 aa13.34□□□□□ -0.27
SUMO1-208ENST00000409627 CENPXA8MT69 81 aa13.33□□□□□ -0.28
SUMO1-208ENST00000409627 FAM106CPP0CH98 169 aa13.33□□□□□ -0.28
SUMO1-208ENST00000409627 PGAM2P15259 253 aa13.33□□□□□ -0.28
SUMO1-208ENST00000409627 MC5RP33032 325 aa13.33□□□□□ -0.28
SUMO1-208ENST00000409627 TAGLNQ01995 201 aaKnown RBP13.33□□□□□ -0.28
SUMO1-208ENST00000409627 GLDNQ6ZMI3 551 aaPredicted RBP13.33□□□□□ -0.28
SUMO1-208ENST00000409627 LIAT1Q6ZQX7 453 aa13.33□□□□□ -0.28
SUMO1-208ENST00000409627 CMTM1Q8IZ96 169 aa13.33□□□□□ -0.28
SUMO1-208ENST00000409627 ZFAND1Q8TCF1 268 aa13.33□□□□□ -0.28
SUMO1-208ENST00000409627 DDB2Q92466 427 aa13.33□□□□□ -0.28
SUMO1-208ENST00000409627 PITPNC1Q9UKF7 332 aa13.33□□□□□ -0.28
SUMO1-208ENST00000409627 LINC00854A0A1B0GVQ3 168 aa13.32□□□□□ -0.28
SUMO1-208ENST00000409627 A6NDX4 124 aa13.32□□□□□ -0.28
SUMO1-208ENST00000409627 LINC00473A8K010 186 aa13.32□□□□□ -0.28
SUMO1-208ENST00000409627 PLA2G10O15496 165 aa13.32□□□□□ -0.28
SUMO1-208ENST00000409627 IGKV1D-33P01593 117 aa13.32□□□□□ -0.28
SUMO1-208ENST00000409627 IGKV1-33P01594 117 aa13.32□□□□□ -0.28
SUMO1-208ENST00000409627 APOA2P02652 100 aa13.32□□□□□ -0.28
SUMO1-208ENST00000409627 CD24P25063 80 aa13.32□□□□□ -0.28
SUMO1-208ENST00000409627 LINC00205P59089 165 aa13.32□□□□□ -0.28
SUMO1-208ENST00000409627 UBA52P62987 128 aaKnown RBP13.32□□□□□ -0.28
SUMO1-208ENST00000409627 KCTD9Q7L273 389 aa13.32□□□□□ -0.28
SUMO1-208ENST00000409627 PDPNQ86YL7 162 aa13.32□□□□□ -0.28
SUMO1-208ENST00000409627 OR2T10Q8NGZ9 312 aa13.32□□□□□ -0.28
SUMO1-208ENST00000409627 MARCH1Q8TCQ1 289 aa13.32□□□□□ -0.28
SUMO1-208ENST00000409627 CHIAQ9BZP6 476 aa13.32□□□□□ -0.28
SUMO1-208ENST00000409627 WASHC3Q9Y3C0 194 aa13.32□□□□□ -0.28
SUMO1-208ENST00000409627 ZFHX3Q15911 3703 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 LYRM1O43325 122 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 TNFSF12O43508 249 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 MOSP00540 346 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 CTSDP07339 412 aaPredicted RBP13.31□□□□□ -0.28
SUMO1-208ENST00000409627 RNASE1P07998 156 aaKnown RBP13.31□□□□□ -0.28
SUMO1-208ENST00000409627 RRASP10301 218 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 S100GP29377 79 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 RND3P61587 244 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 RPL30P62888 115 aaKnown RBP13.31□□□□□ -0.28
SUMO1-208ENST00000409627 IFITM3Q01628 133 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 CATR1Q13166 79 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 HES1Q14469 280 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 LY6EQ16553 131 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 FBLN7Q53RD9 439 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 CCBE1Q6UXH8 406 aaPredicted RBP13.31□□□□□ -0.28
SUMO1-208ENST00000409627 Q8N6K4 173 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 EAF1Q96JC9 268 aaPredicted RBP13.31□□□□□ -0.28
SUMO1-208ENST00000409627 SCGB3A2Q96PL1 93 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 DUX5Q96PT3 197 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 SLC25A21Q9BQT8 299 aaPredicted RBP13.31□□□□□ -0.28
SUMO1-208ENST00000409627 SLC2A9Q9NRM0 540 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 TNFRSF19Q9NS68 423 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 SLC35D1Q9NTN3 355 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 GPR132Q9UNW8 380 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 PRELID3BQ9Y3B1 194 aa13.31□□□□□ -0.28
SUMO1-208ENST00000409627 RNF212BA8MTL3 300 aa13.3□□□□□ -0.28
SUMO1-208ENST00000409627 PGLYRP1O75594 196 aaPredicted RBP13.3□□□□□ -0.28
SUMO1-208ENST00000409627 TMEM11P17152 192 aa13.3□□□□□ -0.28
SUMO1-208ENST00000409627 BTCP35070 178 aa13.3□□□□□ -0.28
SUMO1-208ENST00000409627 ASAH1Q13510 395 aa13.3□□□□□ -0.28
SUMO1-208ENST00000409627 RTL8BQ17RB0 113 aa13.3□□□□□ -0.28
SUMO1-208ENST00000409627 ABCA11PQ4W5N1 156 aa13.3□□□□□ -0.28
SUMO1-208ENST00000409627 PHLDA2Q53GA4 152 aa13.3□□□□□ -0.28
SUMO1-208ENST00000409627 C16orf82Q7Z2V1 217 aa13.3□□□□□ -0.28
SUMO1-208ENST00000409627 TCTEX1D2Q8WW35 142 aa13.3□□□□□ -0.28
SUMO1-208ENST00000409627 GPHA2Q96T91 129 aa13.3□□□□□ -0.28
SUMO1-208ENST00000409627 RAB18Q9NP72 206 aa13.3□□□□□ -0.28
SUMO1-208ENST00000409627 TBC1D24Q9ULP9 559 aa13.3□□□□□ -0.28
SUMO1-208ENST00000409627 C14orf166Q9Y224 244 aaKnown RBP13.3□□□□□ -0.28
SUMO1-208ENST00000409627 NIPBLQ6KC79 2804 aaeCLIP13.3□□□□□ -0.28
SUMO1-208ENST00000409627 H7C2Y5 167 aa13.29□□□□□ -0.28
SUMO1-208ENST00000409627 TRIM77I1YAP6 450 aa13.29□□□□□ -0.28
SUMO1-208ENST00000409627 OR2F2O95006 317 aa13.29□□□□□ -0.28
SUMO1-208ENST00000409627 RLN1P04808 185 aa13.29□□□□□ -0.28
SUMO1-208ENST00000409627 KIR2DS2P43631 304 aa13.29□□□□□ -0.28
SUMO1-208ENST00000409627 RPL15P61313 204 aaKnown RBP13.29□□□□□ -0.28
SUMO1-208ENST00000409627 CBX3Q13185 183 aa13.29□□□□□ -0.28
SUMO1-208ENST00000409627 RBMS2Q15434 407 aaKnown RBP13.29□□□□□ -0.28
SUMO1-208ENST00000409627 C16orf87Q6PH81 154 aa13.29□□□□□ -0.28
SUMO1-208ENST00000409627 TMEM219Q86XT9 240 aa13.29□□□□□ -0.28
SUMO1-208ENST00000409627 CCDC71LQ8N9Z2 235 aa13.29□□□□□ -0.28
SUMO1-208ENST00000409627 RBM14Q96PK6 669 aaKnown RBP13.29□□□□□ -0.28
SUMO1-208ENST00000409627 RNF5Q99942 180 aa13.29□□□□□ -0.28
SUMO1-208ENST00000409627 SLC25A33Q9BSK2 321 aa13.29□□□□□ -0.28
SUMO1-208ENST00000409627 C5orf66Q9H5L9 145 aa13.29□□□□□ -0.28
SUMO1-208ENST00000409627 VSIG4Q9Y279 399 aa13.29□□□□□ -0.28
SUMO1-208ENST00000409627 CUBNO60494 3623 aa13.29□□□□□ -0.28
SUMO1-208ENST00000409627 RBFOX2O43251 390 aaKnown RBP eCLIP13.28□□□□□ -0.28
SUMO1-208ENST00000409627 CHST1O43916 411 aa13.28□□□□□ -0.28
SUMO1-208ENST00000409627 GPR137BO60478 399 aa13.28□□□□□ -0.28
SUMO1-208ENST00000409627 IGKV1-16P04430 117 aa13.28□□□□□ -0.28
SUMO1-208ENST00000409627 PI3P19957 117 aa13.28□□□□□ -0.28
SUMO1-208ENST00000409627 CCR6P51684 374 aa13.28□□□□□ -0.28
SUMO1-208ENST00000409627 PIGPP57054 158 aa13.28□□□□□ -0.28
SUMO1-208ENST00000409627 DHRS7BQ6IAN0 325 aaPredicted RBP13.28□□□□□ -0.28
SUMO1-208ENST00000409627 TBC1D26Q86UD7 250 aa13.28□□□□□ -0.28
SUMO1-208ENST00000409627 PRIMA1Q86XR5 153 aa13.28□□□□□ -0.28
SUMO1-208ENST00000409627 TCTEX1D1Q8N7M0 179 aa13.28□□□□□ -0.28
SUMO1-208ENST00000409627 OR8H1Q8NGG4 311 aa13.28□□□□□ -0.28
SUMO1-208ENST00000409627 OR4C13Q8NGP0 309 aa13.28□□□□□ -0.28
SUMO1-208ENST00000409627 OR51H1Q8NH63 302 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms