RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 PTTG1O95997 202 aa13.32□□□□□ -0.28
TSPAN4-208ENST00000409531 TCRBP04435 133 aa13.32□□□□□ -0.28
TSPAN4-208ENST00000409531 BRS3P32247 399 aa13.32□□□□□ -0.28
TSPAN4-208ENST00000409531 REG1BP48304 166 aa13.32□□□□□ -0.28
TSPAN4-208ENST00000409531 THBS3P49746 956 aa13.32□□□□□ -0.28
TSPAN4-208ENST00000409531 RND3P61587 244 aa13.32□□□□□ -0.28
TSPAN4-208ENST00000409531 C17orf50Q8WW18 174 aa13.32□□□□□ -0.28
TSPAN4-208ENST00000409531 ZNF48Q96MX3 618 aaPredicted RBP13.32□□□□□ -0.28
TSPAN4-208ENST00000409531 MRPL20Q9BYC9 149 aaKnown RBP13.32□□□□□ -0.28
TSPAN4-208ENST00000409531 SLC2A9Q9NRM0 540 aa13.32□□□□□ -0.28
TSPAN4-208ENST00000409531 PRELID3BQ9Y3B1 194 aa13.32□□□□□ -0.28
TSPAN4-208ENST00000409531 SOX21Q9Y651 276 aaPredicted RBP13.32□□□□□ -0.28
TSPAN4-208ENST00000409531 STAB1Q9NY15 2570 aa13.32□□□□□ -0.28
TSPAN4-208ENST00000409531 A0A1W2PPI3 338 aa13.31□□□□□ -0.28
TSPAN4-208ENST00000409531 MC5RP33032 325 aa13.31□□□□□ -0.28
TSPAN4-208ENST00000409531 DUTP33316 252 aaKnown RBP13.31□□□□□ -0.28
TSPAN4-208ENST00000409531 PIGPP57054 158 aa13.31□□□□□ -0.28
TSPAN4-208ENST00000409531 DIAPH2-AS1Q14236 149 aa13.31□□□□□ -0.28
TSPAN4-208ENST00000409531 AANATQ16613 207 aa13.31□□□□□ -0.28
TSPAN4-208ENST00000409531 PHLDA2Q53GA4 152 aa13.31□□□□□ -0.28
TSPAN4-208ENST00000409531 C11orf88Q6PI97 169 aa13.31□□□□□ -0.28
TSPAN4-208ENST00000409531 KCTD9Q7L273 389 aa13.31□□□□□ -0.28
TSPAN4-208ENST00000409531 MOB3BQ86TA1 216 aa13.31□□□□□ -0.28
TSPAN4-208ENST00000409531 C5orf30Q96GV9 206 aa13.31□□□□□ -0.28
TSPAN4-208ENST00000409531 NABP2Q9BQ15 211 aa13.31□□□□□ -0.28
TSPAN4-208ENST00000409531 ESM1Q9NQ30 184 aa13.31□□□□□ -0.28
TSPAN4-208ENST00000409531 VSIG4Q9Y279 399 aa13.31□□□□□ -0.28
TSPAN4-208ENST00000409531 VGLL3A8MV65 326 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 PGLYRP1O75594 196 aaPredicted RBP13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 APOA2P02652 100 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 RLN1P04808 185 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 CT45A6P0DMU7 189 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 CT45A5P0DMU8 189 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 CT45A7P0DMV0 189 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 RRASP10301 218 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 PI3P19957 117 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 DYNLT3P51808 116 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 TAS2R31P59538 309 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 CBX3Q13185 183 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 RGS21Q2M5E4 152 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 DEFB112Q30KQ8 113 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 NRARPQ7Z6K4 114 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 DYNAPQ8N1N2 210 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 CENPSQ8N2Z9 138 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 TCTEX1D1Q8N7M0 179 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 DUSP18Q8NEJ0 188 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 TCTEX1D2Q8WW35 142 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 ZDHHC16Q969W1 377 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 RTBDNQ9BSG5 229 aaPredicted RBP13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 PRDM13Q9H4Q3 707 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 C5orf66Q9H5L9 145 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 LIN7CQ9NUP9 197 aaKnown RBP13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 NUBP2Q9Y5Y2 271 aa13.3□□□□□ -0.28
TSPAN4-208ENST00000409531 TIMM23O14925 209 aa13.29□□□□□ -0.28
TSPAN4-208ENST00000409531 TNFSF12O43508 249 aa13.29□□□□□ -0.28
TSPAN4-208ENST00000409531 B3GALNT1O75752 331 aa13.29□□□□□ -0.28
TSPAN4-208ENST00000409531 CD1BP29016 333 aa13.29□□□□□ -0.28
TSPAN4-208ENST00000409531 KIR2DS2P43631 304 aa13.29□□□□□ -0.28
TSPAN4-208ENST00000409531 RAB13P51153 203 aa13.29□□□□□ -0.28
TSPAN4-208ENST00000409531 EIF4EBP1Q13541 118 aaPredicted RBP13.29□□□□□ -0.28
TSPAN4-208ENST00000409531 HABP2Q14520 560 aaPredicted RBP13.29□□□□□ -0.28
TSPAN4-208ENST00000409531 LRRC75BQ2VPJ9 315 aa13.29□□□□□ -0.28
TSPAN4-208ENST00000409531 PLET1Q6UQ28 207 aa13.29□□□□□ -0.28
TSPAN4-208ENST00000409531 TMED4Q7Z7H5 227 aa13.29□□□□□ -0.28
TSPAN4-208ENST00000409531 DRAXINQ8NBI3 349 aaPredicted RBP13.29□□□□□ -0.28
TSPAN4-208ENST00000409531 OR5AN1Q8NGI8 311 aa13.29□□□□□ -0.28
TSPAN4-208ENST00000409531 C20orf85Q9H1P6 137 aa13.29□□□□□ -0.28
TSPAN4-208ENST00000409531 NUDT15Q9NV35 164 aa13.29□□□□□ -0.28
TSPAN4-208ENST00000409531 TEX13DA0A0J9YY54 714 aaPredicted RBP13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 LINC00473A8K010 186 aa13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 ARPC1BO15143 372 aaKnown RBP13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 MPPED1O15442 326 aa13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 F2RP25116 425 aa13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 UBE2MP61081 183 aaKnown RBP13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 UBA52P62987 128 aaKnown RBP13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 RTL8BQ17RB0 113 aa13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 TMEM128Q5BJH2 165 aa13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 TBC1D26Q86UD7 250 aa13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 PDPNQ86YL7 162 aa13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 SGPP2Q8IWX5 399 aa13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 ZNF383Q8NA42 475 aa13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 OR51H1Q8NH63 302 aa13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 CD300LFQ8TDQ1 290 aa13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 SSX3Q99909 188 aa13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 FAM212BQ9NTI7 297 aaPredicted RBP13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 SLC35D1Q9NTN3 355 aa13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 WASHC3Q9Y3C0 194 aa13.28□□□□□ -0.28
TSPAN4-208ENST00000409531 BTBD17A6NE02 478 aa13.27□□□□□ -0.29
TSPAN4-208ENST00000409531 H0YJW9 148 aa13.27□□□□□ -0.29
TSPAN4-208ENST00000409531 H7C2Y5 167 aa13.27□□□□□ -0.29
TSPAN4-208ENST00000409531 H2AFB2P0C5Z0 115 aa13.27□□□□□ -0.29
TSPAN4-208ENST00000409531 FAM106CPP0CH98 169 aa13.27□□□□□ -0.29
TSPAN4-208ENST00000409531 AKR1C4P17516 323 aa13.27□□□□□ -0.29
TSPAN4-208ENST00000409531 DHRS7BQ6IAN0 325 aaPredicted RBP13.27□□□□□ -0.29
TSPAN4-208ENST00000409531 Q6YL49 198 aa13.27□□□□□ -0.29
TSPAN4-208ENST00000409531 GLDNQ6ZMI3 551 aaPredicted RBP13.27□□□□□ -0.29
TSPAN4-208ENST00000409531 THNSL2Q86YJ6 484 aa13.27□□□□□ -0.29
TSPAN4-208ENST00000409531 DDB2Q92466 427 aa13.27□□□□□ -0.29
TSPAN4-208ENST00000409531 CFHR4Q92496 578 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms