RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 TCF21O43680 179 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 IGKV1D-33P01593 117 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 IGKV1-33P01594 117 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 CD1BP29016 333 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 BTCP35070 178 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 EBI3Q14213 229 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 HNF4GQ14541 408 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 TMEM219Q86XT9 240 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 CAPSLQ8WWF8 208 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 DDB2Q92466 427 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 PRRT1Q99946 306 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 TCF19Q9Y242 345 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 POMT1Q9Y6A1 747 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 PGLYRP1O75594 196 aaPredicted RBP12.76□□□□□ -0.37
HMGA1-204ENST00000401473 IGKV1-16P04430 117 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 FAUP35544 74 aaKnown RBP12.76□□□□□ -0.37
HMGA1-204ENST00000401473 CCR6P51684 374 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 ARHGDIBP52566 201 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 THNSL2Q86YJ6 484 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 AKR1E2Q96JD6 320 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 TSC22D3Q99576 134 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 SCP2D1Q9UJQ7 156 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 TBC1D24Q9ULP9 559 aa12.76□□□□□ -0.37
HMGA1-204ENST00000401473 A6NDX4 124 aa12.75□□□□□ -0.37
HMGA1-204ENST00000401473 FAM106CPP0CH98 169 aa12.75□□□□□ -0.37
HMGA1-204ENST00000401473 MSMO1Q15800 293 aa12.75□□□□□ -0.37
HMGA1-204ENST00000401473 PHLDA2Q53GA4 152 aa12.75□□□□□ -0.37
HMGA1-204ENST00000401473 LPCAT3Q6P1A2 487 aa12.75□□□□□ -0.37
HMGA1-204ENST00000401473 ZBTB34Q8NCN2 500 aa12.75□□□□□ -0.37
HMGA1-204ENST00000401473 OR5R1Q8NH85 324 aa12.75□□□□□ -0.37
HMGA1-204ENST00000401473 TAF15Q92804 592 aaKnown RBP eCLIP12.75□□□□□ -0.37
HMGA1-204ENST00000401473 EAF1Q96JC9 268 aaPredicted RBP12.75□□□□□ -0.37
HMGA1-204ENST00000401473 RTBDNQ9BSG5 229 aaPredicted RBP12.75□□□□□ -0.37
HMGA1-204ENST00000401473 VPREB3Q9UKI3 123 aa12.75□□□□□ -0.37
HMGA1-204ENST00000401473 GPR132Q9UNW8 380 aa12.75□□□□□ -0.37
HMGA1-204ENST00000401473 A0A0A6YYJ9 748 aa12.74□□□□□ -0.37
HMGA1-204ENST00000401473 CLDN34H7C241 214 aa12.74□□□□□ -0.37
HMGA1-204ENST00000401473 GPR31O00270 319 aa12.74□□□□□ -0.37
HMGA1-204ENST00000401473 HES1Q14469 280 aa12.74□□□□□ -0.37
HMGA1-204ENST00000401473 SLC38A6Q8IZM9 456 aa12.74□□□□□ -0.37
HMGA1-204ENST00000401473 TMEM86BQ8N661 226 aa12.74□□□□□ -0.37
HMGA1-204ENST00000401473 C5orf66Q9H5L9 145 aa12.74□□□□□ -0.37
HMGA1-204ENST00000401473 CHST1O43916 411 aa12.74□□□□□ -0.37
HMGA1-204ENST00000401473 PGAM2P15259 253 aa12.74□□□□□ -0.37
HMGA1-204ENST00000401473 MC5RP33032 325 aa12.74□□□□□ -0.37
HMGA1-204ENST00000401473 THBS3P49746 956 aa12.74□□□□□ -0.37
HMGA1-204ENST00000401473 F2RL1P55085 397 aa12.74□□□□□ -0.37
HMGA1-204ENST00000401473 RIPPLY3P57055 190 aa12.74□□□□□ -0.37
HMGA1-204ENST00000401473 UBA52P62987 128 aaKnown RBP12.74□□□□□ -0.37
HMGA1-204ENST00000401473 C16orf87Q6PH81 154 aa12.74□□□□□ -0.37
HMGA1-204ENST00000401473 Q8N6K4 173 aa12.74□□□□□ -0.37
HMGA1-204ENST00000401473 HSD17B10Q99714 261 aaKnown RBP12.74□□□□□ -0.37
HMGA1-204ENST00000401473 SLC2A9Q9NRM0 540 aa12.74□□□□□ -0.37
HMGA1-204ENST00000401473 PLSCR3Q9NRY6 295 aa12.74□□□□□ -0.37
HMGA1-204ENST00000401473 VSIG4Q9Y279 399 aa12.74□□□□□ -0.37
HMGA1-204ENST00000401473 TENM1Q9UKZ4 2725 aa12.74□□□□□ -0.37
HMGA1-204ENST00000401473 H7C2Y5 167 aa12.73□□□□□ -0.37
HMGA1-204ENST00000401473 LYRM1O43325 122 aa12.73□□□□□ -0.37
HMGA1-204ENST00000401473 RLN1P04808 185 aa12.73□□□□□ -0.37
HMGA1-204ENST00000401473 OR2B11Q5JQS5 317 aa12.73□□□□□ -0.37
HMGA1-204ENST00000401473 ZNF66Q6ZN08 573 aa12.73□□□□□ -0.37
HMGA1-204ENST00000401473 KCTD9Q7L273 389 aa12.73□□□□□ -0.37
HMGA1-204ENST00000401473 CMTM1Q8IZ96 169 aa12.73□□□□□ -0.37
HMGA1-204ENST00000401473 OR51H1Q8NH63 302 aa12.73□□□□□ -0.37
HMGA1-204ENST00000401473 BTBD17A6NE02 478 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 FAM181BA6NEQ2 426 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 NAP1L6A6NFF2 107 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 RAMP3O60896 148 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 MOSP00540 346 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 RNASE1P07998 156 aaKnown RBP12.72□□□□□ -0.37
HMGA1-204ENST00000401473 CNTFRP26992 372 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 PIGPP57054 158 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 OR2T10Q8NGZ9 312 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 TCTEX1D2Q8WW35 142 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 RBM14Q96PK6 669 aaKnown RBP12.72□□□□□ -0.37
HMGA1-204ENST00000401473 JMJD8Q96S16 334 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 C7orf50Q9BRJ6 194 aaKnown RBP12.72□□□□□ -0.37
HMGA1-204ENST00000401473 SLC35D1Q9NTN3 355 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 WASHC3Q9Y3C0 194 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 SRRM4A7MD48 611 aaKnown RBP12.72□□□□□ -0.37
HMGA1-204ENST00000401473 CENPXA8MT69 81 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 GPR137BO60478 399 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 FCGR3BO75015 233 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 AMY1AP04745 511 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 TMEM11P17152 192 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 SURF2Q15527 256 aaPredicted RBP12.72□□□□□ -0.37
HMGA1-204ENST00000401473 TBC1D26Q86UD7 250 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 ADAD2Q8NCV1 583 aaKnown RBP12.72□□□□□ -0.37
HMGA1-204ENST00000401473 ZFAND1Q8TCF1 268 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 BORCS5Q969J3 196 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 ADTRPQ96IZ2 230 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 PITPNC1Q9UKF7 332 aa12.72□□□□□ -0.37
HMGA1-204ENST00000401473 MPPED1O15442 326 aa12.71□□□□□ -0.37
HMGA1-204ENST00000401473 PEX14O75381 377 aa12.71□□□□□ -0.37
HMGA1-204ENST00000401473 CTSDP07339 412 aaPredicted RBP12.71□□□□□ -0.37
HMGA1-204ENST00000401473 SLC6A1P30531 599 aa12.71□□□□□ -0.37
HMGA1-204ENST00000401473 ECI1P42126 302 aa12.71□□□□□ -0.37
HMGA1-204ENST00000401473 ZNF486Q96H40 463 aaPredicted RBP12.71□□□□□ -0.37
HMGA1-204ENST00000401473 SLC25A21Q9BQT8 299 aaPredicted RBP12.71□□□□□ -0.37
HMGA1-204ENST00000401473 APOA2P02652 100 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms