RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 TIMM50Q3ZCQ8 353 aa12.05□□□□□ -0.48
ATG4B-202ENST00000400771 CXorf66Q5JRM2 361 aaPredicted RBP12.05□□□□□ -0.48
ATG4B-202ENST00000400771 FOXB2Q5VYV0 432 aa12.05□□□□□ -0.48
ATG4B-202ENST00000400771 LIN54Q6MZP7 749 aa12.05□□□□□ -0.48
ATG4B-202ENST00000400771 MINDY2Q8NBR6 621 aa12.05□□□□□ -0.48
ATG4B-202ENST00000400771 DUX3Q96PT4 197 aa12.05□□□□□ -0.48
ATG4B-202ENST00000400771 GON7Q9BXV9 100 aa12.05□□□□□ -0.48
ATG4B-202ENST00000400771 DCSTAMPQ9H295 470 aa12.05□□□□□ -0.48
ATG4B-202ENST00000400771 KIAA1456Q9P272 454 aa12.05□□□□□ -0.48
ATG4B-202ENST00000400771 WSB1Q9Y6I7 421 aa12.05□□□□□ -0.48
ATG4B-202ENST00000400771 COL7A1Q02388 2944 aa12.04□□□□□ -0.48
ATG4B-202ENST00000400771 TRAV41A0A0B4J266 112 aa12.04□□□□□ -0.48
ATG4B-202ENST00000400771 IGKV1D-13A0A0B4J2D9 117 aa12.04□□□□□ -0.48
ATG4B-202ENST00000400771 LINC00473A8K010 186 aa12.04□□□□□ -0.48
ATG4B-202ENST00000400771 NUDT19A8MXV4 375 aa12.04□□□□□ -0.48
ATG4B-202ENST00000400771 IGLV2-14P01704 120 aa12.04□□□□□ -0.48
ATG4B-202ENST00000400771 IGKV1-13P0DP09 117 aa12.04□□□□□ -0.48
ATG4B-202ENST00000400771 TALDO1P37837 337 aa12.04□□□□□ -0.48
ATG4B-202ENST00000400771 RPS19P39019 145 aaKnown RBP12.04□□□□□ -0.48
ATG4B-202ENST00000400771 CDX1P47902 265 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-202ENST00000400771 CX3CL1P78423 397 aa12.04□□□□□ -0.48
ATG4B-202ENST00000400771 FHL3Q13643 280 aa12.04□□□□□ -0.48
ATG4B-202ENST00000400771 MRGPRG-AS1Q2M3A8 158 aa12.04□□□□□ -0.48
ATG4B-202ENST00000400771 RCC1LQ96I51 464 aaKnown RBP12.04□□□□□ -0.48
ATG4B-202ENST00000400771 RNF5Q99942 180 aa12.04□□□□□ -0.48
ATG4B-202ENST00000400771 GINS4Q9BRT9 223 aa12.04□□□□□ -0.48
ATG4B-202ENST00000400771 KLK15Q9H2R5 256 aa12.04□□□□□ -0.48
ATG4B-202ENST00000400771 SLC35D1Q9NTN3 355 aa12.04□□□□□ -0.48
ATG4B-202ENST00000400771 AURKAIP1Q9NWT8 199 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-202ENST00000400771 SPATA2Q9UM82 520 aa12.04□□□□□ -0.48
ATG4B-202ENST00000400771 A0A0A6YYH2 397 aa12.03□□□□□ -0.48
ATG4B-202ENST00000400771 A6NJ64 397 aa12.03□□□□□ -0.48
ATG4B-202ENST00000400771 TUSC2O75896 110 aa12.03□□□□□ -0.48
ATG4B-202ENST00000400771 CA2P00918 260 aa12.03□□□□□ -0.48
ATG4B-202ENST00000400771 APOA2P02652 100 aa12.03□□□□□ -0.48
ATG4B-202ENST00000400771 CRYGBP07316 175 aa12.03□□□□□ -0.48
ATG4B-202ENST00000400771 OR5H8P0DN80 308 aa12.03□□□□□ -0.48
ATG4B-202ENST00000400771 PTHLHP12272 177 aa12.03□□□□□ -0.48
ATG4B-202ENST00000400771 DUTP33316 252 aaKnown RBP12.03□□□□□ -0.48
ATG4B-202ENST00000400771 GNG2P59768 71 aa12.03□□□□□ -0.48
ATG4B-202ENST00000400771 LSM3P62310 102 aaKnown RBP12.03□□□□□ -0.48
ATG4B-202ENST00000400771 PITPNAQ00169 270 aa12.03□□□□□ -0.48
ATG4B-202ENST00000400771 ECSCRQ19T08 205 aa12.03□□□□□ -0.48
ATG4B-202ENST00000400771 ASPHD1Q5U4P2 390 aa12.03□□□□□ -0.48
ATG4B-202ENST00000400771 OR13F1Q8NGS4 319 aa12.03□□□□□ -0.48
ATG4B-202ENST00000400771 C4orf3Q8WVX3 66 aa12.03□□□□□ -0.48
ATG4B-202ENST00000400771 AUNIPQ9H7T9 357 aa12.03□□□□□ -0.48
ATG4B-202ENST00000400771 GNB4Q9HAV0 340 aa12.03□□□□□ -0.48
ATG4B-202ENST00000400771 METTL1Q9UBP6 276 aaKnown RBP12.03□□□□□ -0.48
ATG4B-202ENST00000400771 ANXA10Q9UJ72 324 aa12.03□□□□□ -0.48
ATG4B-202ENST00000400771 TRAV18A0A075B6X5 111 aa12.02□□□□□ -0.49
ATG4B-202ENST00000400771 ARPC1BO15143 372 aaKnown RBP12.02□□□□□ -0.49
ATG4B-202ENST00000400771 SLC25A17O43808 307 aa12.02□□□□□ -0.49
ATG4B-202ENST00000400771 TMEM127O75204 238 aa12.02□□□□□ -0.49
ATG4B-202ENST00000400771 NFYAP23511 347 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-202ENST00000400771 MYCNOSP40205 109 aa12.02□□□□□ -0.49
ATG4B-202ENST00000400771 NCS1P62166 190 aa12.02□□□□□ -0.49
ATG4B-202ENST00000400771 EIF4EBP1Q13541 118 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-202ENST00000400771 TMEM177Q53S58 311 aa12.02□□□□□ -0.49
ATG4B-202ENST00000400771 ZNF660Q6AZW8 331 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-202ENST00000400771 CNIH2Q6PI25 160 aa12.02□□□□□ -0.49
ATG4B-202ENST00000400771 GVQW1Q8N7I0 195 aa12.02□□□□□ -0.49
ATG4B-202ENST00000400771 SNAPC3Q92966 411 aa12.02□□□□□ -0.49
ATG4B-202ENST00000400771 TSNAXQ99598 290 aaKnown RBP12.02□□□□□ -0.49
ATG4B-202ENST00000400771 FAM103A1Q9BTL3 118 aaKnown RBP12.02□□□□□ -0.49
ATG4B-202ENST00000400771 ST6GALNAC5Q9BVH7 336 aa12.02□□□□□ -0.49
ATG4B-202ENST00000400771 FUNDC2Q9BWH2 189 aa12.02□□□□□ -0.49
ATG4B-202ENST00000400771 VCX3AQ9NNX9 186 aa12.02□□□□□ -0.49
ATG4B-202ENST00000400771 NECAP2Q9NVZ3 263 aa12.02□□□□□ -0.49
ATG4B-202ENST00000400771 OR2W1Q9Y3N9 320 aa12.02□□□□□ -0.49
ATG4B-202ENST00000400771 NUBP2Q9Y5Y2 271 aa12.02□□□□□ -0.49
ATG4B-202ENST00000400771 SRRM4A7MD48 611 aaKnown RBP12.01□□□□□ -0.49
ATG4B-202ENST00000400771 I3L521 148 aa12.01□□□□□ -0.49
ATG4B-202ENST00000400771 HLA-DQB1P01920 261 aa12.01□□□□□ -0.49
ATG4B-202ENST00000400771 KRTAP10-11P60412 298 aa12.01□□□□□ -0.49
ATG4B-202ENST00000400771 EGFEM1PQ0D2K5 195 aa12.01□□□□□ -0.49
ATG4B-202ENST00000400771 ZNF645Q8N7E2 425 aa12.01□□□□□ -0.49
ATG4B-202ENST00000400771 ZNF491Q8N8L2 437 aa12.01□□□□□ -0.49
ATG4B-202ENST00000400771 BVESQ8NE79 360 aa12.01□□□□□ -0.49
ATG4B-202ENST00000400771 FLYWCH2Q96CP2 140 aaKnown RBP12.01□□□□□ -0.49
ATG4B-202ENST00000400771 HARBI1Q96MB7 349 aa12.01□□□□□ -0.49
ATG4B-202ENST00000400771 A0A1W2PN81 502 aa12□□□□□ -0.49
ATG4B-202ENST00000400771 CCL24O00175 119 aa12□□□□□ -0.49
ATG4B-202ENST00000400771 CHRNA7P36544 502 aa12□□□□□ -0.49
ATG4B-202ENST00000400771 RPS16P62249 146 aaKnown RBP12□□□□□ -0.49
ATG4B-202ENST00000400771 RUNX1Q01196 453 aa12□□□□□ -0.49
ATG4B-202ENST00000400771 PJVKQ0ZLH3 352 aa12□□□□□ -0.49
ATG4B-202ENST00000400771 PLGLAQ15195 96 aa12□□□□□ -0.49
ATG4B-202ENST00000400771 UBE2NLQ5JXB2 153 aa12□□□□□ -0.49
ATG4B-202ENST00000400771 OVCH2Q7RTZ1 564 aa12□□□□□ -0.49
ATG4B-202ENST00000400771 HOGA1Q86XE5 327 aa12□□□□□ -0.49
ATG4B-202ENST00000400771 BEST4Q8NFU0 473 aa12□□□□□ -0.49
ATG4B-202ENST00000400771 CASTOR1Q8WTX7 329 aa12□□□□□ -0.49
ATG4B-202ENST00000400771 SLC25A46Q96AG3 418 aa12□□□□□ -0.49
ATG4B-202ENST00000400771 CLCC1Q96S66 551 aa12□□□□□ -0.49
ATG4B-202ENST00000400771 NAA50Q9GZZ1 169 aaKnown RBP12□□□□□ -0.49
ATG4B-202ENST00000400771 ANAPC10Q9UM13 185 aa12□□□□□ -0.49
ATG4B-202ENST00000400771 FOXA2Q9Y261 457 aaPredicted RBP12□□□□□ -0.49
ATG4B-202ENST00000400771 DUS4LO95620 317 aaKnown RBP11.99□□□□□ -0.49
ATG4B-202ENST00000400771 CTXN2P0C2S0 81 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms