RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 KRASP01116 189 aa13.07□□□□□ -0.32
CDC42-203ENST00000400259 FABP1P07148 127 aa13.07□□□□□ -0.32
CDC42-203ENST00000400259 OR8U8P0C7N1 319 aa13.07□□□□□ -0.32
CDC42-203ENST00000400259 TNFSF4P23510 183 aa13.07□□□□□ -0.32
CDC42-203ENST00000400259 OR2B11Q5JQS5 317 aa13.07□□□□□ -0.32
CDC42-203ENST00000400259 STUMQ69YW2 141 aa13.07□□□□□ -0.32
CDC42-203ENST00000400259 SPSB3Q6PJ21 355 aa13.07□□□□□ -0.32
CDC42-203ENST00000400259 TMEM14EPQ6UXP3 125 aa13.07□□□□□ -0.32
CDC42-203ENST00000400259 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.07□□□□□ -0.32
CDC42-203ENST00000400259 DEFB108AA8MXU0 73 aa13.06□□□□□ -0.32
CDC42-203ENST00000400259 METTL15P1P0C7V9 234 aa13.06□□□□□ -0.32
CDC42-203ENST00000400259 AKR1C3P42330 323 aa13.06□□□□□ -0.32
CDC42-203ENST00000400259 PPT1P50897 306 aa13.06□□□□□ -0.32
CDC42-203ENST00000400259 ARL16Q0P5N6 197 aa13.06□□□□□ -0.32
CDC42-203ENST00000400259 KDF1Q8NAX2 398 aaPredicted RBP13.06□□□□□ -0.32
CDC42-203ENST00000400259 PSMG3Q9BT73 122 aaPredicted RBP13.06□□□□□ -0.32
CDC42-203ENST00000400259 RBKSQ9H477 322 aa13.06□□□□□ -0.32
CDC42-203ENST00000400259 IFNA4P05014 189 aa13.06□□□□□ -0.32
CDC42-203ENST00000400259 GPR12P47775 334 aa13.06□□□□□ -0.32
CDC42-203ENST00000400259 AKIRIN2Q53H80 203 aa13.06□□□□□ -0.32
CDC42-203ENST00000400259 AKR1C8PQ5T2L2 129 aa13.06□□□□□ -0.32
CDC42-203ENST00000400259 RAB9BQ9NP90 201 aa13.06□□□□□ -0.32
CDC42-203ENST00000400259 BIN3Q9NQY0 253 aa13.06□□□□□ -0.32
CDC42-203ENST00000400259 GNG12Q9UBI6 72 aa13.06□□□□□ -0.32
CDC42-203ENST00000400259 H7C2Y5 167 aa13.05□□□□□ -0.32
CDC42-203ENST00000400259 PROP1O75360 226 aa13.05□□□□□ -0.32
CDC42-203ENST00000400259 DUTP33316 252 aaKnown RBP13.05□□□□□ -0.32
CDC42-203ENST00000400259 EIF5A2Q9GZV4 153 aaKnown RBP13.05□□□□□ -0.32
CDC42-203ENST00000400259 CALYQ9NYX4 217 aa13.05□□□□□ -0.32
CDC42-203ENST00000400259 KIAA1456Q9P272 454 aa13.05□□□□□ -0.32
CDC42-203ENST00000400259 GAB2Q9UQC2 676 aa13.05□□□□□ -0.32
CDC42-203ENST00000400259 LRRC75BQ2VPJ9 315 aa13.05□□□□□ -0.32
CDC42-203ENST00000400259 DIRC2Q96SL1 478 aa13.05□□□□□ -0.32
CDC42-203ENST00000400259 FAM234AQ9H0X4 552 aa13.05□□□□□ -0.32
CDC42-203ENST00000400259 TRAV1-1A0A0B4J248 108 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 MEX3AA1L020 520 aaKnown RBP13.04□□□□□ -0.32
CDC42-203ENST00000400259 DPRXA6NFQ7 191 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 FAM90A9PA6NNJ1 464 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 RBFOX2O43251 390 aaKnown RBP eCLIP13.04□□□□□ -0.324e-8■■□□□ 13.9
CDC42-203ENST00000400259 THBDP07204 575 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 CD55P08174 381 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 EDDM3BP56851 147 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 TLE4Q04727 773 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 AARDQ4LEZ3 155 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 SPANXN5Q5MJ07 72 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 FAM201AQ5SY85 155 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 H2BFWTQ7Z2G1 175 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 THNSL2Q86YJ6 484 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 SCGB1C1Q8TD33 95 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 SNRNP40Q96DI7 357 aaKnown RBP13.04□□□□□ -0.32
CDC42-203ENST00000400259 COL25A1Q9BXS0 654 aaPredicted RBP13.04□□□□□ -0.32
CDC42-203ENST00000400259 IFI27L2Q9H2X8 130 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 SMG1Q96Q15 3661 aaKnown RBP13.04□□□□□ -0.32
CDC42-203ENST00000400259 CCL20P78556 96 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 ZNF124Q15973 351 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 LTC4SQ16873 150 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 C17orf58Q2M2W7 97 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 TEX36Q5VZQ5 186 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 NCR3LG1Q68D85 454 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 SLC25A24Q6NUK1 477 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 GAFA1Q96PS6 74 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 SLC35B3Q9H1N7 401 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 MLXQ9UH92 298 aa13.04□□□□□ -0.32
CDC42-203ENST00000400259 RP1L1Q8IWN7 2480 aaPredicted RBP13.04□□□□□ -0.32
CDC42-203ENST00000400259 PTPRZ1P23471 2315 aaPredicted RBP13.03□□□□□ -0.32
CDC42-203ENST00000400259 MARCH11A6NNE9 402 aa13.03□□□□□ -0.32
CDC42-203ENST00000400259 HBE1P02100 147 aa13.03□□□□□ -0.32
CDC42-203ENST00000400259 ZNF788Q6ZQV5 615 aa13.03□□□□□ -0.32
CDC42-203ENST00000400259 WFDC8Q8IUA0 241 aa13.03□□□□□ -0.32
CDC42-203ENST00000400259 CIB3Q96Q77 187 aaPredicted RBP13.03□□□□□ -0.32
CDC42-203ENST00000400259 ZNF665Q9H7R5 613 aa13.03□□□□□ -0.32
CDC42-203ENST00000400259 LINC00574Q9H8X3 128 aa13.03□□□□□ -0.32
CDC42-203ENST00000400259 FBXO7Q9Y3I1 522 aa13.03□□□□□ -0.32
CDC42-203ENST00000400259 ICE1Q9Y2F5 2266 aa13.03□□□□□ -0.32
CDC42-203ENST00000400259 KBTBD11-OT1A0A1B0GTJ5 212 aa13.02□□□□□ -0.32
CDC42-203ENST00000400259 GPR37O15354 613 aa13.02□□□□□ -0.32
CDC42-203ENST00000400259 CYB5R3P00387 301 aaPredicted RBP13.02□□□□□ -0.32
CDC42-203ENST00000400259 HPRT1P00492 218 aa13.02□□□□□ -0.32
CDC42-203ENST00000400259 RAB7AP51149 207 aa13.02□□□□□ -0.32
CDC42-203ENST00000400259 SERF2P84101 59 aa13.02□□□□□ -0.32
CDC42-203ENST00000400259 SLC38A11Q08AI6 406 aa13.02□□□□□ -0.32
CDC42-203ENST00000400259 ADIPOQQ15848 244 aa13.02□□□□□ -0.32
CDC42-203ENST00000400259 RXFP4Q8TDU9 374 aa13.02□□□□□ -0.32
CDC42-203ENST00000400259 R3HDM4Q96D70 268 aa13.02□□□□□ -0.32
CDC42-203ENST00000400259 RBMXL1Q96E39 390 aaKnown RBP13.02□□□□□ -0.32
CDC42-203ENST00000400259 ZNF251Q9BRH9 671 aa13.02□□□□□ -0.32
CDC42-203ENST00000400259 WDR61Q9GZS3 305 aaKnown RBP13.02□□□□□ -0.32
CDC42-203ENST00000400259 CLN8Q9UBY8 286 aa13.02□□□□□ -0.32
CDC42-203ENST00000400259 DOCK11Q5JSL3 2073 aa13.02□□□□□ -0.32
CDC42-203ENST00000400259 RBFOX3A6NFN3 312 aa13.02□□□□□ -0.33
CDC42-203ENST00000400259 SMIM6P0DI80 62 aa13.02□□□□□ -0.33
CDC42-203ENST00000400259 SELLP14151 372 aa13.02□□□□□ -0.33
CDC42-203ENST00000400259 ZNF134P52741 427 aa13.02□□□□□ -0.33
CDC42-203ENST00000400259 LINC00205P59089 165 aa13.02□□□□□ -0.33
CDC42-203ENST00000400259 BSPH1Q075Z2 132 aa13.02□□□□□ -0.33
CDC42-203ENST00000400259 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.02□□□□□ -0.33
CDC42-203ENST00000400259 OR4C12Q96R67 309 aa13.02□□□□□ -0.33
CDC42-203ENST00000400259 GFOD1Q9NXC2 390 aa13.02□□□□□ -0.33
CDC42-203ENST00000400259 MSRB2Q9Y3D2 182 aa13.02□□□□□ -0.33
CDC42-203ENST00000400259 PMS2P5A8MQ11 134 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms