RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 PPBPP02775 128 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 COX7A1P24310 79 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 FAM209AQ5JX71 171 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 WFDC3Q8IUB2 231 aa7.52□□□□□ -1.21
CACNA1C-220ENST00000399655 DSCAML1Q8TD84 2053 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 FRG2CA6NGY1 282 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 TM4SF19Q96DZ7 209 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 A0A096LPE4 126 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 A0A1W2PPZ6 126 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 CTLA4P16410 223 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 OTPQ5XKR4 325 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 AMER3Q8N944 861 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 GLIS3Q8NEA6 775 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 TMEM126AQ9H061 195 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 DTX4Q9Y2E6 619 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 A0A0U1RQF3 1178 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 MRPS21P82921 87 aaKnown RBP7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 ATG4DQ86TL0 474 aaPredicted RBP7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 SLC25A10Q9UBX3 287 aaPredicted RBP7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 A0A1B0GUT8 65 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 GAPDHP04406 335 aaKnown RBP7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 GTF3AQ92664 365 aaKnown RBP7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 SFXN3Q9BWM7 321 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 CLEC2DQ9UHP7 191 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 TNS2Q63HR2 1409 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 CGB1A6NKQ9 187 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 MPLP40238 635 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 WIPI1Q5MNZ9 446 aaPredicted RBP7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 PQLC3Q8N755 202 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 SETBP1Q9Y6X0 1596 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 G3V2L1 256 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 SPSB4Q96A44 273 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 ADM5C9JUS6 153 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 IGHG3P01860 377 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 TNFSF15O95150 251 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 TGFAP01135 160 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 IRF3Q14653 427 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 BHLHA9Q7RTU4 235 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 WSB2Q9NYS7 404 aaPredicted RBP7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 NEU3Q9UQ49 428 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 J3KTA2 159 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 CD3EP07766 207 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 DSCR4P56555 118 aaPredicted RBP7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 TCEAL1Q15170 157 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 SEMA5BQ9P283 1151 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 LEUTXA8MZ59 168 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 IGHV3-9P01782 118 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 DUSP2Q05923 314 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 DEFB133Q30KQ1 61 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 TMEM30BQ3MIR4 351 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 FNDC4Q9H6D8 234 aaPredicted RBP7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 RNF122Q9H9V4 155 aa7.51□□□□□ -1.21
CACNA1C-220ENST00000399655 ATOH7Q8N100 152 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 KIAA1549Q9HCM3 1950 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 IL6RP08887 468 aaPredicted RBP7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 CCL17Q92583 94 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 MS4A6EQ96DS6 147 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 UPK2O00526 184 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 PF4P02776 101 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 SELLP14151 372 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 POLR2IP36954 125 aaKnown RBP7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 FAAP20Q6NZ36 180 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 OR8B12Q8NGG6 310 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 ARHGAP5-AS1Q96IT6 56 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 IFNL4K9M1U5 179 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 FFAR1O14842 300 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 SNAI1O95863 264 aaPredicted RBP7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 SSTR5P35346 364 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 FBXO27Q8NI29 283 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 MVB12AQ96EY5 273 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 FMC1Q96HJ9 113 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 PPIAL4DF5H284 164 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 SP6Q3SY56 376 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 PDLIM5Q96HC4 596 aaKnown RBP7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 hADV29S1A0JD25 119 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 GFYI3L273 518 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 TCRAP04437 139 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 V9GYY9 64 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 J3KT08 172 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 CTSVO60911 334 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 GLULP15104 373 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 LINC00158P58513 81 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 HIST1H2BAQ96A08 127 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 SSBP3Q9BWW4 388 aaPredicted RBP7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 GPR27Q9NS67 375 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 MED29Q9NX70 200 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 DSPPQ9NZW4 1301 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 PAX4O43316 350 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 NDUFS5O43920 106 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 UBE2DNLQ8IWF7 75 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 FAM53CQ9NYF3 392 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 CXorf66Q5JRM2 361 aaPredicted RBP7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 GLIS2Q9BZE0 524 aaPredicted RBP7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 OTORQ9NRC9 128 aa7.5□□□□□ -1.21
CACNA1C-220ENST00000399655 TIAM2Q8IVF5 1701 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 LAMB1P07942 1786 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 RPL18Q07020 188 aaKnown RBP7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 ZNF124Q15973 351 aa7.49□□□□□ -1.21
CACNA1C-220ENST00000399655 GUSBP11Q6P575 273 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms