RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 NDUFS6O75380 124 aaKnown RBP19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 IGHV3-43DP0DP04 118 aa19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 EIF2S3P41091 472 aaKnown RBP19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 VWC2Q2TAL6 325 aa19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 RPP25LQ8N5L8 163 aaKnown RBP19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 OR2Z1Q8NG97 314 aa19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 RFESDQ8TAC1 157 aa19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 CACNA1GO43497 2377 aa19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 CTXND1A0A1B0GTU2 59 aa19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 FAM90A9PA6NNJ1 464 aa19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 ST8SIA5O15466 376 aa19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 FGF7P21781 194 aa19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 GNB2P62879 340 aa19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 KIAA0141Q14154 515 aaPredicted RBP19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 ZADH2Q8N4Q0 377 aa19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 SDF2L1Q9HCN8 221 aa19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 PARD6AQ9NPB6 346 aa19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 JPT1Q9UK76 154 aa19.25■□□□□ 0.67
RABGGTA-202ENST00000399409 WDFY4Q6ZS81 3184 aa19.24■□□□□ 0.67
RABGGTA-202ENST00000399409 CYB5R3P00387 301 aaPredicted RBP19.24■□□□□ 0.67
RABGGTA-202ENST00000399409 SNX22Q96L94 193 aa19.24■□□□□ 0.67
RABGGTA-202ENST00000399409 MGST3O14880 152 aa19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 RBMXL2O75526 392 aaKnown RBP19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 CXCL1P09341 107 aa19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 GPR12P47775 334 aa19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 CR1LQ2VPA4 569 aa19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 ZNF343Q6P1L6 599 aa19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 ACSM6Q6P461 480 aa19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 FAM180AQ6UWF9 173 aa19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 BDP1A6H8Y1 2624 aa19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 MARCH11A6NNE9 402 aa19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 IGKV1D-33P01593 117 aa19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 IGKV1-33P01594 117 aa19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 CD55P08174 381 aa19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 RND2P52198 227 aa19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 ERVFRD-1P60508 538 aa19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 EDDM3AQ14507 147 aa19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 ZNF674Q2M3X9 581 aa19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 OR13D1Q8NGV5 346 aa19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 R3HDM4Q96D70 268 aa19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 GTF3C1Q12789 2109 aa19.23■□□□□ 0.67
RABGGTA-202ENST00000399409 DEFB108AA8MXU0 73 aa19.22■□□□□ 0.67
RABGGTA-202ENST00000399409 CLDN34H7C241 214 aa19.22■□□□□ 0.67
RABGGTA-202ENST00000399409 TGOLN2O43493 480 aa19.22■□□□□ 0.67
RABGGTA-202ENST00000399409 EGR1P18146 543 aa19.22■□□□□ 0.67
RABGGTA-202ENST00000399409 AARDQ4LEZ3 155 aa19.22■□□□□ 0.67
RABGGTA-202ENST00000399409 ZNF709Q8N972 641 aa19.22■□□□□ 0.67
RABGGTA-202ENST00000399409 ACTR3CQ9C0K3 210 aaPredicted RBP19.22■□□□□ 0.67
RABGGTA-202ENST00000399409 CTDSP1Q9GZU7 261 aa19.22■□□□□ 0.67
RABGGTA-202ENST00000399409 IGKV1D-17A0A075B6S4 117 aa19.22■□□□□ 0.67
RABGGTA-202ENST00000399409 C17orf112F2Z3M2 114 aa19.22■□□□□ 0.67
RABGGTA-202ENST00000399409 YPEL1O60688 119 aa19.22■□□□□ 0.67
RABGGTA-202ENST00000399409 DUTP33316 252 aaKnown RBP19.22■□□□□ 0.67
RABGGTA-202ENST00000399409 OR10G9Q8NGN4 311 aa19.22■□□□□ 0.67
RABGGTA-202ENST00000399409 OR10G7Q8NGN6 311 aa19.22■□□□□ 0.67
RABGGTA-202ENST00000399409 ZDHHC16Q969W1 377 aa19.22■□□□□ 0.67
RABGGTA-202ENST00000399409 YPEL2Q96QA6 119 aa19.22■□□□□ 0.67
RABGGTA-202ENST00000399409 ZNF251Q9BRH9 671 aa19.22■□□□□ 0.67
RABGGTA-202ENST00000399409 DCTN5Q9BTE1 182 aa19.22■□□□□ 0.67
RABGGTA-202ENST00000399409 HPRT1P00492 218 aa19.21■□□□□ 0.67
RABGGTA-202ENST00000399409 PSMB3P49720 205 aa19.21■□□□□ 0.67
RABGGTA-202ENST00000399409 C3orf36Q3SXR2 165 aa19.21■□□□□ 0.67
RABGGTA-202ENST00000399409 SEM1Q6ZVN7 128 aa19.21■□□□□ 0.67
RABGGTA-202ENST00000399409 GNG12Q9UBI6 72 aa19.21■□□□□ 0.67
RABGGTA-202ENST00000399409 URGCP-MRPS24S4R325 110 aa19.21■□□□□ 0.67
RABGGTA-202ENST00000399409 TGIF2-C20orf24A0A0A6YYL0 155 aa19.21■□□□□ 0.67
RABGGTA-202ENST00000399409 IGHV3-13P01766 116 aa19.21■□□□□ 0.67
RABGGTA-202ENST00000399409 MEF2BQ02080 365 aaPredicted RBP19.21■□□□□ 0.67
RABGGTA-202ENST00000399409 MORN2Q502X0 79 aa19.21■□□□□ 0.67
RABGGTA-202ENST00000399409 FFAR4Q5NUL3 377 aa19.21■□□□□ 0.67
RABGGTA-202ENST00000399409 WDR25Q64LD2 544 aaPredicted RBP19.21■□□□□ 0.67
RABGGTA-202ENST00000399409 NCR3LG1Q68D85 454 aa19.21■□□□□ 0.67
RABGGTA-202ENST00000399409 NANPQ8TBE9 248 aa19.21■□□□□ 0.67
RABGGTA-202ENST00000399409 TMPRSS5Q9H3S3 457 aa19.21■□□□□ 0.67
RABGGTA-202ENST00000399409 MANBALQ9NQG1 85 aa19.21■□□□□ 0.67
RABGGTA-202ENST00000399409 ATXN7O15265 892 aaPredicted RBP19.2■□□□□ 0.66
RABGGTA-202ENST00000399409 HOXA5P20719 270 aa19.2■□□□□ 0.66
RABGGTA-202ENST00000399409 MDKP21741 143 aaPredicted RBP19.2■□□□□ 0.66
RABGGTA-202ENST00000399409 TIMM23BQ5SRD1 257 aa19.2■□□□□ 0.66
RABGGTA-202ENST00000399409 C1orf87Q8N0U7 546 aa19.2■□□□□ 0.66
RABGGTA-202ENST00000399409 NPCDR1Q9BY65 106 aa19.2■□□□□ 0.66
RABGGTA-202ENST00000399409 NAT8Q9UHE5 227 aa19.2■□□□□ 0.66
RABGGTA-202ENST00000399409 TMEM250H0YL14 139 aa19.2■□□□□ 0.66
RABGGTA-202ENST00000399409 RBFOX2O43251 390 aaKnown RBP eCLIP19.2■□□□□ 0.66
RABGGTA-202ENST00000399409 RPP30P78346 268 aaKnown RBP19.2■□□□□ 0.66
RABGGTA-202ENST00000399409 NCOR1P1Q9H4R4 102 aa19.2■□□□□ 0.66
RABGGTA-202ENST00000399409 DUSP13Q9UII6 198 aa19.2■□□□□ 0.66
RABGGTA-202ENST00000399409 F2RL2O00254 374 aa19.19■□□□□ 0.66
RABGGTA-202ENST00000399409 SOX15O60248 233 aa19.19■□□□□ 0.66
RABGGTA-202ENST00000399409 ZNF83P51522 516 aa19.19■□□□□ 0.66
RABGGTA-202ENST00000399409 CD81P60033 236 aa19.19■□□□□ 0.66
RABGGTA-202ENST00000399409 SLC16A13Q7RTY0 426 aa19.19■□□□□ 0.66
RABGGTA-202ENST00000399409 CYB5BO43169 146 aa19.18■□□□□ 0.66
RABGGTA-202ENST00000399409 CTAG1AP78358 180 aa19.18■□□□□ 0.66
RABGGTA-202ENST00000399409 TFF3Q07654 80 aa19.18■□□□□ 0.66
RABGGTA-202ENST00000399409 GCSAMQ8N6F7 178 aa19.18■□□□□ 0.66
RABGGTA-202ENST00000399409 QTRT1Q9BXR0 403 aaKnown RBP19.18■□□□□ 0.66
RABGGTA-202ENST00000399409 SLC25A22Q9H936 323 aa19.18■□□□□ 0.66
RABGGTA-202ENST00000399409 RAB9BQ9NP90 201 aa19.18■□□□□ 0.66
RABGGTA-202ENST00000399409 CLN5O75503 358 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms