RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 CRIP2P52943 208 aaPredicted RBP10.44□□□□□ -0.74
VCX3A-202ENST00000398729 RPS16P62249 146 aaKnown RBP10.44□□□□□ -0.74
VCX3A-202ENST00000398729 KIAA0141Q14154 515 aaPredicted RBP10.44□□□□□ -0.74
VCX3A-202ENST00000398729 IGSF11Q5DX21 431 aa10.44□□□□□ -0.74
VCX3A-202ENST00000398729 C9orf66Q5T8R8 295 aa10.44□□□□□ -0.74
VCX3A-202ENST00000398729 TPRA1Q86W33 373 aa10.44□□□□□ -0.74
VCX3A-202ENST00000398729 NR2C2APQ86WQ0 139 aa10.44□□□□□ -0.74
VCX3A-202ENST00000398729 ZNF383Q8NA42 475 aa10.44□□□□□ -0.74
VCX3A-202ENST00000398729 OR11H1Q8NG94 326 aa10.44□□□□□ -0.74
VCX3A-202ENST00000398729 FLYWCH2Q96CP2 140 aaKnown RBP10.44□□□□□ -0.74
VCX3A-202ENST00000398729 OR2D2Q9H210 308 aa10.44□□□□□ -0.74
VCX3A-202ENST00000398729 GNB4Q9HAV0 340 aa10.44□□□□□ -0.74
VCX3A-202ENST00000398729 ZNF230Q9UIE0 474 aaPredicted RBP10.44□□□□□ -0.74
VCX3A-202ENST00000398729 SSR3Q9UNL2 185 aa10.44□□□□□ -0.74
VCX3A-202ENST00000398729 GAB2Q9UQC2 676 aa10.44□□□□□ -0.74
VCX3A-202ENST00000398729 FOXA2Q9Y261 457 aaPredicted RBP10.44□□□□□ -0.74
VCX3A-202ENST00000398729 FBXO7Q9Y3I1 522 aa10.44□□□□□ -0.74
VCX3A-202ENST00000398729 RBM7Q9Y580 266 aaKnown RBP10.44□□□□□ -0.74
VCX3A-202ENST00000398729 TRBV6-7A0A0A0MS04 114 aa10.43□□□□□ -0.74
VCX3A-202ENST00000398729 IGKV1-16P04430 117 aa10.43□□□□□ -0.74
VCX3A-202ENST00000398729 OR8U8P0C7N1 319 aa10.43□□□□□ -0.74
VCX3A-202ENST00000398729 LINC00205P59089 165 aa10.43□□□□□ -0.74
VCX3A-202ENST00000398729 DGCR2P98153 550 aa10.43□□□□□ -0.74
VCX3A-202ENST00000398729 RUNX1Q01196 453 aa10.43□□□□□ -0.74
VCX3A-202ENST00000398729 FHL3Q13643 280 aa10.43□□□□□ -0.74
VCX3A-202ENST00000398729 PSG5Q15238 335 aa10.43□□□□□ -0.74
VCX3A-202ENST00000398729 SRSF7Q16629 238 aaKnown RBP eCLIP10.43□□□□□ -0.74
VCX3A-202ENST00000398729 ZNF773Q6PK81 442 aa10.43□□□□□ -0.74
VCX3A-202ENST00000398729 ZNF562Q6V9R5 426 aa10.43□□□□□ -0.74
VCX3A-202ENST00000398729 OR1N2Q8NGR9 330 aa10.43□□□□□ -0.74
VCX3A-202ENST00000398729 MAFIPQ8WZ33 124 aa10.43□□□□□ -0.74
VCX3A-202ENST00000398729 WWC2-AS2Q96NR7 200 aa10.43□□□□□ -0.74
VCX3A-202ENST00000398729 CLCC1Q96S66 551 aa10.43□□□□□ -0.74
VCX3A-202ENST00000398729 GINS4Q9BRT9 223 aa10.43□□□□□ -0.74
VCX3A-202ENST00000398729 SLC35D1Q9NTN3 355 aa10.43□□□□□ -0.74
VCX3A-202ENST00000398729 NUBP2Q9Y5Y2 271 aa10.43□□□□□ -0.74
VCX3A-202ENST00000398729 A3GALT2U3KPV4 340 aa10.43□□□□□ -0.74
VCX3A-202ENST00000398729 SEC14L6B5MCN3 397 aa10.42□□□□□ -0.74
VCX3A-202ENST00000398729 I3L521 148 aa10.42□□□□□ -0.74
VCX3A-202ENST00000398729 RAMP3O60896 148 aa10.42□□□□□ -0.74
VCX3A-202ENST00000398729 CA2P00918 260 aa10.42□□□□□ -0.74
VCX3A-202ENST00000398729 DTYMKP23919 212 aa10.42□□□□□ -0.74
VCX3A-202ENST00000398729 LUMP51884 338 aaPredicted RBP10.42□□□□□ -0.74
VCX3A-202ENST00000398729 ZNF616Q08AN1 781 aa10.42□□□□□ -0.74
VCX3A-202ENST00000398729 CBX3Q13185 183 aa10.42□□□□□ -0.74
VCX3A-202ENST00000398729 DCTN2Q13561 401 aaKnown RBP10.42□□□□□ -0.74
VCX3A-202ENST00000398729 ACTBL2Q562R1 376 aa10.42□□□□□ -0.74
VCX3A-202ENST00000398729 C19orf54Q5BKX5 351 aa10.42□□□□□ -0.74
VCX3A-202ENST00000398729 PYHIN1Q6K0P9 492 aa10.42□□□□□ -0.74
VCX3A-202ENST00000398729 UNQ5815/PRO19632Q6UWF5 114 aa10.42□□□□□ -0.74
VCX3A-202ENST00000398729 Q6ZS49 121 aa10.42□□□□□ -0.74
VCX3A-202ENST00000398729 PPP1R27Q86WC6 154 aa10.42□□□□□ -0.74
VCX3A-202ENST00000398729 OR5B12Q96R08 314 aa10.42□□□□□ -0.74
VCX3A-202ENST00000398729 SDHAF2Q9NX18 166 aa10.42□□□□□ -0.74
VCX3A-202ENST00000398729 DAPK2Q9UIK4 370 aa10.42□□□□□ -0.74
VCX3A-202ENST00000398729 SLC25A17O43808 307 aa10.41□□□□□ -0.74
VCX3A-202ENST00000398729 SOX15O60248 233 aa10.41□□□□□ -0.74
VCX3A-202ENST00000398729 SCGNO76038 276 aa10.41□□□□□ -0.74
VCX3A-202ENST00000398729 EGR2P11161 476 aaPredicted RBP10.41□□□□□ -0.74
VCX3A-202ENST00000398729 CD40LGP29965 261 aa10.41□□□□□ -0.74
VCX3A-202ENST00000398729 LGALS7P47929 136 aa10.41□□□□□ -0.74
VCX3A-202ENST00000398729 GNB1P62873 340 aa10.41□□□□□ -0.74
VCX3A-202ENST00000398729 TAGLNQ01995 201 aaKnown RBP10.41□□□□□ -0.74
VCX3A-202ENST00000398729 CDNFQ49AH0 187 aa10.41□□□□□ -0.74
VCX3A-202ENST00000398729 AKIRIN2Q53H80 203 aa10.41□□□□□ -0.74
VCX3A-202ENST00000398729 ARPC1AQ92747 370 aa10.41□□□□□ -0.74
VCX3A-202ENST00000398729 FAM103A1Q9BTL3 118 aaKnown RBP10.41□□□□□ -0.74
VCX3A-202ENST00000398729 RRP15Q9Y3B9 282 aaKnown RBP10.41□□□□□ -0.74
VCX3A-202ENST00000398729 CTXN2P0C2S0 81 aa10.4□□□□□ -0.74
VCX3A-202ENST00000398729 RRASP10301 218 aa10.4□□□□□ -0.74
VCX3A-202ENST00000398729 SNRPBP14678 240 aaKnown RBP10.4□□□□□ -0.74
VCX3A-202ENST00000398729 PITPNAQ00169 270 aa10.4□□□□□ -0.74
VCX3A-202ENST00000398729 FXYD3Q14802 87 aa10.4□□□□□ -0.74
VCX3A-202ENST00000398729 RTL8BQ17RB0 113 aa10.4□□□□□ -0.74
VCX3A-202ENST00000398729 ZNF260Q3ZCT1 412 aa10.4□□□□□ -0.74
VCX3A-202ENST00000398729 HACD4Q5VWC8 232 aa10.4□□□□□ -0.74
VCX3A-202ENST00000398729 SFXN4Q6P4A7 337 aa10.4□□□□□ -0.74
VCX3A-202ENST00000398729 H1FOOQ8IZA3 346 aaPredicted RBP10.4□□□□□ -0.74
VCX3A-202ENST00000398729 LFNGQ8NES3 379 aa10.4□□□□□ -0.74
VCX3A-202ENST00000398729 CASTOR1Q8WTX7 329 aa10.4□□□□□ -0.74
VCX3A-202ENST00000398729 ADTRPQ96IZ2 230 aa10.4□□□□□ -0.74
VCX3A-202ENST00000398729 HARBI1Q96MB7 349 aa10.4□□□□□ -0.74
VCX3A-202ENST00000398729 OR51E2Q9H255 320 aa10.4□□□□□ -0.74
VCX3A-202ENST00000398729 DCSTAMPQ9H295 470 aa10.4□□□□□ -0.74
VCX3A-202ENST00000398729 TPSG1Q9NRR2 321 aa10.4□□□□□ -0.74
VCX3A-202ENST00000398729 ELF5Q9UKW6 265 aaPredicted RBP10.4□□□□□ -0.74
VCX3A-202ENST00000398729 DNAH1Q9P2D7 4330 aa10.4□□□□□ -0.74
VCX3A-202ENST00000398729 HUWE1Q7Z6Z7 4374 aaKnown RBP10.4□□□□□ -0.75
VCX3A-202ENST00000398729 IGKV1D-8A0A087WSZ0 117 aa10.39□□□□□ -0.75
VCX3A-202ENST00000398729 SHOXO15266 292 aa10.39□□□□□ -0.75
VCX3A-202ENST00000398729 CNIH1O95406 144 aa10.39□□□□□ -0.75
VCX3A-202ENST00000398729 LGALS1P09382 135 aaKnown RBP10.39□□□□□ -0.75
VCX3A-202ENST00000398729 SDC2P34741 201 aa10.39□□□□□ -0.75
VCX3A-202ENST00000398729 INSL3P51460 131 aa10.39□□□□□ -0.75
VCX3A-202ENST00000398729 CD69Q07108 199 aa10.39□□□□□ -0.75
VCX3A-202ENST00000398729 ASPHD1Q5U4P2 390 aa10.39□□□□□ -0.75
VCX3A-202ENST00000398729 GRPEL2Q8TAA5 225 aa10.39□□□□□ -0.75
VCX3A-202ENST00000398729 LGALS14Q8TCE9 139 aa10.39□□□□□ -0.75
VCX3A-202ENST00000398729 ST6GALNAC5Q9BVH7 336 aa10.39□□□□□ -0.75
VCX3A-202ENST00000398729 ALX4Q9H161 411 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms