RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 IGKV1-33P01594 117 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 APCSP02743 223 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 ANAPC16Q96DE5 110 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 RHOVQ96L33 236 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 ZP3P21754 424 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 GTF2H5Q6ZYL4 71 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 SGK494Q96LW2 274 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 TRGV3P03979 118 aa9.71□□□□□ -0.85
TTC28-201ENST00000397906 TNFSF10P50591 281 aa9.71□□□□□ -0.85
TTC28-201ENST00000397906 SNRPD3P62318 126 aaKnown RBP9.71□□□□□ -0.85
TTC28-201ENST00000397906 ZNF253O75346 499 aa9.71□□□□□ -0.85
TTC28-201ENST00000397906 CELA3BP08861 270 aa9.71□□□□□ -0.85
TTC28-201ENST00000397906 ELOBQ15370 118 aa9.71□□□□□ -0.85
TTC28-201ENST00000397906 RPL39P5Q59GN2 51 aa9.71□□□□□ -0.85
TTC28-201ENST00000397906 ZNF502Q8TBZ5 544 aa9.71□□□□□ -0.85
TTC28-201ENST00000397906 RPL29P47914 159 aaKnown RBP9.71□□□□□ -0.85
TTC28-201ENST00000397906 KNTC1P50748 2209 aa9.71□□□□□ -0.85
TTC28-201ENST00000397906 CECR9P0C854 216 aa9.71□□□□□ -0.85
TTC28-201ENST00000397906 NSUN5P1Q3KNT7 163 aa9.71□□□□□ -0.85
TTC28-201ENST00000397906 EEF1AKMT3Q96AZ1 226 aa9.71□□□□□ -0.85
TTC28-201ENST00000397906 IGHV3OR16-8A0A075B7F1 116 aa9.71□□□□□ -0.85
TTC28-201ENST00000397906 C12orf57Q99622 126 aa9.71□□□□□ -0.85
TTC28-201ENST00000397906 SVILO95425 2214 aa9.71□□□□□ -0.86
TTC28-201ENST00000397906 MARCH11A6NNE9 402 aa9.71□□□□□ -0.86
TTC28-201ENST00000397906 HTN3P15516 51 aa9.71□□□□□ -0.86
TTC28-201ENST00000397906 TOLLIPQ9H0E2 274 aa9.71□□□□□ -0.86
TTC28-201ENST00000397906 HSPB7Q9UBY9 170 aa9.71□□□□□ -0.86
TTC28-201ENST00000397906 ARID2Q68CP9 1835 aa9.71□□□□□ -0.86
TTC28-201ENST00000397906 ZNF883P0CG24 379 aa9.71□□□□□ -0.86
TTC28-201ENST00000397906 STPG3Q8N7X2 389 aa9.71□□□□□ -0.86
TTC28-201ENST00000397906 LIMS1P48059 325 aa9.71□□□□□ -0.86
TTC28-201ENST00000397906 OR2T10Q8NGZ9 312 aa9.71□□□□□ -0.86
TTC28-201ENST00000397906 VAX2Q9UIW0 290 aa9.71□□□□□ -0.86
TTC28-201ENST00000397906 HSF4Q9ULV5 492 aa9.71□□□□□ -0.86
TTC28-201ENST00000397906 EIF3GO75821 320 aaKnown RBP eCLIP9.71□□□□□ -0.86
TTC28-201ENST00000397906 OR11H7Q8NGC8 314 aa9.71□□□□□ -0.86
TTC28-201ENST00000397906 MARVELD1Q9BSK0 173 aa9.71□□□□□ -0.86
TTC28-201ENST00000397906 ELF5Q9UKW6 265 aaPredicted RBP9.71□□□□□ -0.86
TTC28-201ENST00000397906 IGLV1-36A0A0B4J1U3 117 aa9.71□□□□□ -0.86
TTC28-201ENST00000397906 MIC13Q5XKP0 118 aa9.71□□□□□ -0.86
TTC28-201ENST00000397906 OR4C13Q8NGP0 309 aa9.71□□□□□ -0.86
TTC28-201ENST00000397906 H7C2G1 150 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 CORTO00230 105 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 OR2A4O95047 310 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 S1PR2O95136 353 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 OR2A7Q96R45 310 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 FAM206AQ9NX38 181 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 UNC119Q13432 240 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 HLA-DRB5Q30154 266 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 TIMM23BQ5SRD1 257 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 OR9G1Q8NH87 305 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 GPX7Q96SL4 187 aaPredicted RBP9.7□□□□□ -0.86
TTC28-201ENST00000397906 FUT9Q9Y231 359 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 ISLRO14498 428 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 GZMMP51124 257 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 TMEM183BQ1AE95 376 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 AWAT1Q58HT5 328 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 QTRT1Q9BXR0 403 aaKnown RBP9.7□□□□□ -0.86
TTC28-201ENST00000397906 HERPUD1Q15011 391 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 REPIN1Q9BWE0 567 aaKnown RBP9.7□□□□□ -0.86
TTC28-201ENST00000397906 KLF7O75840 302 aaPredicted RBP9.7□□□□□ -0.86
TTC28-201ENST00000397906 WDFY1Q8IWB7 410 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 SCARF2Q96GP6 870 aaPredicted RBP9.7□□□□□ -0.86
TTC28-201ENST00000397906 ZG16O60844 167 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 PITX3O75364 302 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 HSPB1P04792 205 aaKnown RBP9.7□□□□□ -0.86
TTC28-201ENST00000397906 H0Y980 276 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 NPPCP23582 126 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 IQCJQ1A5X6 159 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 TMEM54Q969K7 222 aa9.7□□□□□ -0.86
TTC28-201ENST00000397906 IGHV2OR16-5A0A0B4J2B6 119 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 H0YL77 283 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 CX3CL1P78423 397 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 HIST1H1AQ02539 215 aaPredicted RBP9.69□□□□□ -0.86
TTC28-201ENST00000397906 RELQ04864 619 aaPredicted RBP9.69□□□□□ -0.86
TTC28-201ENST00000397906 CLRN3Q8NCR9 226 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 OR4C5Q8NGB2 326 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 PGLYRP1O75594 196 aaPredicted RBP9.69□□□□□ -0.86
TTC28-201ENST00000397906 APCDD1LQ8NCL9 501 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 OR4X2Q8NGF9 303 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 SNURFLB1AK76 121 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 J3QR89 54 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 MOSP00540 346 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 ZNF56Q15929 161 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 MEGF10Q96KG7 1140 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 CDS2O95674 445 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 DNAJC13O75165 2243 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 BPIFA4PQ86YQ2 179 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 OR5P3Q8WZ94 311 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 ELOVL1Q9BW60 279 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 WISP3O95389 354 aaPredicted RBP9.69□□□□□ -0.86
TTC28-201ENST00000397906 ZCCHC24Q8N2G6 241 aaKnown RBP9.69□□□□□ -0.86
TTC28-201ENST00000397906 PRO1933Q9H354 126 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 IGHV1-2P23083 117 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 FGFRL1Q8N441 504 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 MRPL30Q8TCC3 161 aaKnown RBP9.69□□□□□ -0.86
TTC28-201ENST00000397906 SMIM12Q96EX1 92 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 TRPM7Q96QT4 1865 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 IGHV3-11P01762 117 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 MEOX2P50222 304 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms