RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 FBP1P09467 338 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 PATE4P0C8F1 98 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 NHLH1Q02575 133 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 SLC9A3R2Q15599 337 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 C19orf35Q6ZS72 473 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 OR2S2Q9NQN1 319 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 DOK5Q9P104 306 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 WDR83OSQ9Y284 106 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 LY96Q9Y6Y9 160 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 YLPM1P49750 1951 aaKnown RBP4.9□□□□□ -1.63
PTPRD-206ENST00000397617 SPRY1O43609 319 aaPredicted RBP4.9□□□□□ -1.63
PTPRD-206ENST00000397617 TSPAN15O95858 294 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 FOXG1P55316 489 aaPredicted RBP4.9□□□□□ -1.63
PTPRD-206ENST00000397617 GFRALQ6UXV0 394 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 Q6ZR03 302 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 DRAM1Q8N682 238 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 SEC22AQ96IW7 307 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 OR5B12Q96R08 314 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 FGF23Q9GZV9 251 aaPredicted RBP4.9□□□□□ -1.63
PTPRD-206ENST00000397617 C13orf42A0A1B0GVH6 325 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 C5orf63A6NC05 138 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 FBLL1A6NHQ2 334 aaKnown RBP4.9□□□□□ -1.63
PTPRD-206ENST00000397617 HSBP1L1C9JCN9 74 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 PDPNQ86YL7 162 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 Q8NA96 180 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 BEND2Q8NDZ0 799 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 ABHD5Q8WTS1 349 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 CALYQ9NYX4 217 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 SLC45A2Q9UMX9 530 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 BOLA1Q9Y3E2 137 aa4.9□□□□□ -1.63
PTPRD-206ENST00000397617 CLDN1O95832 211 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 HBZP02008 142 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 IL6RP08887 468 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-206ENST00000397617 HKR1P10072 659 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 DAOP14920 347 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 NDUFB7P17568 137 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 WT1P19544 449 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-206ENST00000397617 BCL3P20749 454 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 GPX4P36969 197 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-206ENST00000397617 TNFRSF9Q07011 255 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 HLA-DRB5Q30154 266 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 TMEM177Q53S58 311 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 SELENOHQ8IZQ5 122 aaKnown RBP4.89□□□□□ -1.63
PTPRD-206ENST00000397617 GCNT2Q8N0V5 402 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 OR9G1Q8NH87 305 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 LRRC29Q8WV35 223 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 COQ2Q96H96 371 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 MAGT1Q9H0U3 335 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 SLC35B3Q9H1N7 401 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 BEX1Q9HBH7 125 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 CCSO14618 274 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 TNFAIP6P98066 277 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-206ENST00000397617 PDCD1Q15116 288 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 NCMAPQ5T1S8 102 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 FAM162BQ5T6X4 162 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 CCDC144NLQ6NUI1 221 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 VWA1Q6PCB0 445 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 OR52B4Q8NGK2 314 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 TIMD4Q96H15 378 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 LIME1Q9H400 295 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 SCGB2A2Q13296 93 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 HNF4GQ14541 408 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 AKIRIN2Q53H80 203 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 WDR86Q86TI4 376 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 CTXND1A0A1B0GTU2 59 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 ZNF503-AS2A6NEH8 195 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 HSD17B6O14756 317 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 HOXB5P09067 269 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 SUB1P53999 127 aaKnown RBP eCLIP4.89□□□□□ -1.63
PTPRD-206ENST00000397617 HSPE1P61604 102 aaKnown RBP4.89□□□□□ -1.63
PTPRD-206ENST00000397617 RAB11AP62491 216 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 PQLC2Q6ZP29 291 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 OR13D1Q8NGV5 346 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 CHIAQ9BZP6 476 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 SAP30LQ9HAJ7 183 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 CBY3A6NI87 242 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 MARCH11A6NNE9 402 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 C17orf112F2Z3M2 114 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 TNFRSF13BO14836 293 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-206ENST00000397617 PSPNO60542 156 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 GFRA3O60609 400 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 LRRC10Q5BKY1 277 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 OR1S2Q8NGQ3 325 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 FOXA2Q9Y261 457 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-206ENST00000397617 TRAV9-1A0A075B6T8 112 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 A0A1W2PN81 502 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 APOA2P02652 100 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 PPIAL4GP0DN37 164 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 CCKARP32238 428 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 CHRNA7P36544 502 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 CEACAM3P40198 252 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 GPR12P47775 334 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 DDB2Q92466 427 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 ZNF775Q96BV0 537 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-206ENST00000397617 CTDSP1Q9GZU7 261 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 PLEKHA3Q9HB20 300 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 GCM1Q9NP62 436 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 ATRQ13535 2644 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 ITPR2Q14571 2701 aa4.89□□□□□ -1.63
PTPRD-206ENST00000397617 GATCO43716 136 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms