RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 FXYD4P59646 89 aa16.79■□□□□ 0.28
TSPAN4-206ENST00000397408 DYRK1AQ13627 763 aa16.79■□□□□ 0.28
TSPAN4-206ENST00000397408 OVCH2Q7RTZ1 564 aa16.79■□□□□ 0.28
TSPAN4-206ENST00000397408 LYSMD2Q8IV50 215 aa16.79■□□□□ 0.28
TSPAN4-206ENST00000397408 SECTM1Q8WVN6 248 aa16.79■□□□□ 0.28
TSPAN4-206ENST00000397408 KIAA1456Q9P272 454 aa16.79■□□□□ 0.28
TSPAN4-206ENST00000397408 RBMX2Q9Y388 322 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-206ENST00000397408 IGLV2-14P01704 120 aa16.78■□□□□ 0.28
TSPAN4-206ENST00000397408 DUTP33316 252 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-206ENST00000397408 IL18Q14116 193 aa16.78■□□□□ 0.28
TSPAN4-206ENST00000397408 SLC35E3Q7Z769 313 aa16.78■□□□□ 0.28
TSPAN4-206ENST00000397408 C11orf44Q8N8P7 122 aa16.78■□□□□ 0.28
TSPAN4-206ENST00000397408 NPBQ8NG41 125 aa16.78■□□□□ 0.28
TSPAN4-206ENST00000397408 GIMAP1Q8WWP7 306 aa16.78■□□□□ 0.28
TSPAN4-206ENST00000397408 ADTRPQ96IZ2 230 aa16.78■□□□□ 0.28
TSPAN4-206ENST00000397408 KLK11Q9UBX7 282 aa16.78■□□□□ 0.28
TSPAN4-206ENST00000397408 LINC00473A8K010 186 aa16.77■□□□□ 0.27
TSPAN4-206ENST00000397408 NDUFA3O95167 84 aa16.77■□□□□ 0.27
TSPAN4-206ENST00000397408 IGHG2P01859 326 aa16.77■□□□□ 0.27
TSPAN4-206ENST00000397408 HERV-K104P61576 105 aa16.77■□□□□ 0.27
TSPAN4-206ENST00000397408 C5orf64Q2M2E5 130 aa16.77■□□□□ 0.27
TSPAN4-206ENST00000397408 PYHIN1Q6K0P9 492 aa16.77■□□□□ 0.27
TSPAN4-206ENST00000397408 TMEM17Q86X19 198 aa16.77■□□□□ 0.27
TSPAN4-206ENST00000397408 BVESQ8NE79 360 aa16.77■□□□□ 0.27
TSPAN4-206ENST00000397408 WIPF2Q8TF74 440 aaPredicted RBP16.77■□□□□ 0.27
TSPAN4-206ENST00000397408 HSPB9Q9BQS6 159 aa16.77■□□□□ 0.27
TSPAN4-206ENST00000397408 ZNF2Q9BSG1 426 aaPredicted RBP16.77■□□□□ 0.27
TSPAN4-206ENST00000397408 SLC5A7Q9GZV3 580 aa16.77■□□□□ 0.27
TSPAN4-206ENST00000397408 RPS16P62249 146 aaKnown RBP16.76■□□□□ 0.27
TSPAN4-206ENST00000397408 DGCR2P98153 550 aa16.76■□□□□ 0.27
TSPAN4-206ENST00000397408 CBX3Q13185 183 aa16.76■□□□□ 0.27
TSPAN4-206ENST00000397408 RTL8BQ17RB0 113 aa16.76■□□□□ 0.27
TSPAN4-206ENST00000397408 ZNF660Q6AZW8 331 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-206ENST00000397408 HIST2H2BDQ6DRA6 164 aa16.76■□□□□ 0.27
TSPAN4-206ENST00000397408 FCAMRQ8WWV6 532 aa16.76■□□□□ 0.27
TSPAN4-206ENST00000397408 DDB2Q92466 427 aa16.76■□□□□ 0.27
TSPAN4-206ENST00000397408 FLYWCH2Q96CP2 140 aaKnown RBP16.76■□□□□ 0.27
TSPAN4-206ENST00000397408 RNF5Q99942 180 aa16.76■□□□□ 0.27
TSPAN4-206ENST00000397408 CCL28Q9NRJ3 127 aa16.76■□□□□ 0.27
TSPAN4-206ENST00000397408 MTFP1Q9UDX5 166 aa16.76■□□□□ 0.27
TSPAN4-206ENST00000397408 DPPA5A6NC42 116 aa16.75■□□□□ 0.27
TSPAN4-206ENST00000397408 LINC01548A6NM66 108 aa16.75■□□□□ 0.27
TSPAN4-206ENST00000397408 GABARAPH6UMI1 98 aa16.75■□□□□ 0.27
TSPAN4-206ENST00000397408 RRHO14718 337 aa16.75■□□□□ 0.27
TSPAN4-206ENST00000397408 FBXO24O75426 580 aa16.75■□□□□ 0.27
TSPAN4-206ENST00000397408 TNFSF8P32971 234 aa16.75■□□□□ 0.27
TSPAN4-206ENST00000397408 MRPS10P82664 201 aaKnown RBP16.75■□□□□ 0.27
TSPAN4-206ENST00000397408 TAGLNQ01995 201 aaKnown RBP16.75■□□□□ 0.27
TSPAN4-206ENST00000397408 DHRS11Q6UWP2 260 aa16.75■□□□□ 0.27
TSPAN4-206ENST00000397408 KCTD9Q7L273 389 aa16.75■□□□□ 0.27
TSPAN4-206ENST00000397408 FOXRED2Q8IWF2 684 aa16.75■□□□□ 0.27
TSPAN4-206ENST00000397408 NOL4LQ96MY1 436 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-206ENST00000397408 MMP27Q9H306 513 aa16.75■□□□□ 0.27
TSPAN4-206ENST00000397408 FBXL15Q9H469 300 aa16.75■□□□□ 0.27
TSPAN4-206ENST00000397408 TAS2R8Q9NYW2 309 aa16.75■□□□□ 0.27
TSPAN4-206ENST00000397408 NDUFA13Q9P0J0 144 aa16.75■□□□□ 0.27
TSPAN4-206ENST00000397408 ZNF107Q9UII5 783 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-206ENST00000397408 KCNAB3O43448 404 aa16.74■□□□□ 0.27
TSPAN4-206ENST00000397408 RRASP10301 218 aa16.74■□□□□ 0.27
TSPAN4-206ENST00000397408 PLGLAQ15195 96 aa16.74■□□□□ 0.27
TSPAN4-206ENST00000397408 MSMO1Q15800 293 aa16.74■□□□□ 0.27
TSPAN4-206ENST00000397408 ACTBL2Q562R1 376 aa16.74■□□□□ 0.27
TSPAN4-206ENST00000397408 CENPVQ7Z7K6 275 aaPredicted RBP16.74■□□□□ 0.27
TSPAN4-206ENST00000397408 SMIM4Q8WVI0 70 aa16.74■□□□□ 0.27
TSPAN4-206ENST00000397408 MOB3AQ96BX8 217 aa16.74■□□□□ 0.27
TSPAN4-206ENST00000397408 DGCR14Q96DF8 476 aaKnown RBP16.74■□□□□ 0.27
TSPAN4-206ENST00000397408 HARBI1Q96MB7 349 aa16.74■□□□□ 0.27
TSPAN4-206ENST00000397408 TSNAXQ99598 290 aaKnown RBP16.74■□□□□ 0.27
TSPAN4-206ENST00000397408 HSD17B10Q99714 261 aaKnown RBP16.74■□□□□ 0.27
TSPAN4-206ENST00000397408 RABL2AQ9UBK7 228 aaPredicted RBP16.74■□□□□ 0.27
TSPAN4-206ENST00000397408 LINC00527Q9UJ94 153 aa16.74■□□□□ 0.27
TSPAN4-206ENST00000397408 RABL2BQ9UNT1 228 aa16.74■□□□□ 0.27
TSPAN4-206ENST00000397408 A3GALT2U3KPV4 340 aa16.74■□□□□ 0.27
TSPAN4-206ENST00000397408 M0QYG6 137 aa16.73■□□□□ 0.27
TSPAN4-206ENST00000397408 AP4M1O00189 453 aa16.73■□□□□ 0.27
TSPAN4-206ENST00000397408 TNFSF12O43508 249 aa16.73■□□□□ 0.27
TSPAN4-206ENST00000397408 HLA-DRB1P01911 266 aa16.73■□□□□ 0.27
TSPAN4-206ENST00000397408 CD28P10747 220 aa16.73■□□□□ 0.27
TSPAN4-206ENST00000397408 TSPAN5P62079 268 aa16.73■□□□□ 0.27
TSPAN4-206ENST00000397408 RPL30P62888 115 aaKnown RBP16.73■□□□□ 0.27
TSPAN4-206ENST00000397408 EIF4EBP1Q13541 118 aaPredicted RBP16.73■□□□□ 0.27
TSPAN4-206ENST00000397408 PSG5Q15238 335 aa16.73■□□□□ 0.27
TSPAN4-206ENST00000397408 OR2B11Q5JQS5 317 aa16.73■□□□□ 0.27
TSPAN4-206ENST00000397408 FOXB2Q5VYV0 432 aa16.73■□□□□ 0.27
TSPAN4-206ENST00000397408 OR5AU1Q8NGC0 362 aa16.73■□□□□ 0.27
TSPAN4-206ENST00000397408 OR6F1Q8NGZ6 308 aa16.73■□□□□ 0.27
TSPAN4-206ENST00000397408 TCTEX1D2Q8WW35 142 aa16.73■□□□□ 0.27
TSPAN4-206ENST00000397408 GPHA2Q96T91 129 aa16.73■□□□□ 0.27
TSPAN4-206ENST00000397408 FXYD6Q9H0Q3 95 aa16.73■□□□□ 0.27
TSPAN4-206ENST00000397408 PRELID3BQ9Y3B1 194 aa16.73■□□□□ 0.27
TSPAN4-206ENST00000397408 CTDSPLO15194 276 aa16.72■□□□□ 0.27
TSPAN4-206ENST00000397408 SPDEFO95238 335 aa16.72■□□□□ 0.27
TSPAN4-206ENST00000397408 CRYZL1O95825 349 aa16.72■□□□□ 0.27
TSPAN4-206ENST00000397408 VAX1Q5SQQ9 334 aa16.72■□□□□ 0.27
TSPAN4-206ENST00000397408 LIN54Q6MZP7 749 aa16.72■□□□□ 0.27
TSPAN4-206ENST00000397408 C10orf99Q6UWK7 81 aa16.72■□□□□ 0.27
TSPAN4-206ENST00000397408 SGMS2Q8NHU3 365 aa16.72■□□□□ 0.27
TSPAN4-206ENST00000397408 CHPT1Q8WUD6 406 aa16.72■□□□□ 0.27
TSPAN4-206ENST00000397408 METTL1Q9UBP6 276 aaKnown RBP16.72■□□□□ 0.27
TSPAN4-206ENST00000397408 TET2Q6N021 2002 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms