RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 FAM27E3Q08E93 113 aa13.76□□□□□ -0.21
TRIM39-205ENST00000396551 RHEBQ15382 184 aa13.76□□□□□ -0.21
TRIM39-205ENST00000396551 NCR3LG1Q68D85 454 aa13.76□□□□□ -0.21
TRIM39-205ENST00000396551 TCTEX1D1Q8N7M0 179 aa13.76□□□□□ -0.21
TRIM39-205ENST00000396551 C2CD4CQ8TF44 421 aa13.76□□□□□ -0.21
TRIM39-205ENST00000396551 PARD6GQ9BYG4 376 aaPredicted RBP13.76□□□□□ -0.21
TRIM39-205ENST00000396551 TUBA4BQ9H853 241 aa13.76□□□□□ -0.21
TRIM39-205ENST00000396551 SEBOXQ9HB31 216 aaPredicted RBP13.76□□□□□ -0.21
TRIM39-205ENST00000396551 UBE2L5PA0A1B0GUS4 154 aa13.76□□□□□ -0.21
TRIM39-205ENST00000396551 A0A1W2PPH5 198 aa13.76□□□□□ -0.21
TRIM39-205ENST00000396551 PMS2P5A8MQ11 134 aa13.76□□□□□ -0.21
TRIM39-205ENST00000396551 MGST3O14880 152 aa13.76□□□□□ -0.21
TRIM39-205ENST00000396551 CRYABP02511 175 aaKnown RBP13.76□□□□□ -0.21
TRIM39-205ENST00000396551 CR1LQ2VPA4 569 aa13.76□□□□□ -0.21
TRIM39-205ENST00000396551 MORN2Q502X0 79 aa13.76□□□□□ -0.21
TRIM39-205ENST00000396551 HSD17B10Q99714 261 aaKnown RBP13.76□□□□□ -0.21
TRIM39-205ENST00000396551 SFXN3Q9BWM7 321 aa13.76□□□□□ -0.21
TRIM39-205ENST00000396551 KLF2Q9Y5W3 355 aaPredicted RBP13.76□□□□□ -0.21
TRIM39-205ENST00000396551 RAI1Q7Z5J4 1906 aaPredicted RBP13.76□□□□□ -0.21
TRIM39-205ENST00000396551 DSCAML1Q8TD84 2053 aa13.75□□□□□ -0.21
TRIM39-205ENST00000396551 BSNQ9UPA5 3926 aa13.75□□□□□ -0.21
TRIM39-205ENST00000396551 A0A1W2PPE2 198 aa13.75□□□□□ -0.21
TRIM39-205ENST00000396551 ARG1P05089 322 aa13.75□□□□□ -0.21
TRIM39-205ENST00000396551 CYB561D1Q8N8Q1 229 aa13.75□□□□□ -0.21
TRIM39-205ENST00000396551 FAM57AQ8TBR7 257 aa13.75□□□□□ -0.21
TRIM39-205ENST00000396551 TAF15Q92804 592 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRIM39-205ENST00000396551 MRPL37Q9BZE1 423 aaKnown RBP13.75□□□□□ -0.21
TRIM39-205ENST00000396551 HCFC1P51610 2035 aa13.75□□□□□ -0.21
TRIM39-205ENST00000396551 HSPB1P04792 205 aaKnown RBP13.75□□□□□ -0.21
TRIM39-205ENST00000396551 HABP2Q14520 560 aaPredicted RBP13.75□□□□□ -0.21
TRIM39-205ENST00000396551 ZFHX2Q9C0A1 2572 aaPredicted RBP13.75□□□□□ -0.21
TRIM39-205ENST00000396551 LOC102723971A0A1B0GUV8 181 aa13.75□□□□□ -0.21
TRIM39-205ENST00000396551 GZMHP20718 246 aa13.75□□□□□ -0.21
TRIM39-205ENST00000396551 DUTP33316 252 aaKnown RBP13.75□□□□□ -0.21
TRIM39-205ENST00000396551 CEBPGP53567 150 aa13.75□□□□□ -0.21
TRIM39-205ENST00000396551 LOXL3P58215 753 aa13.75□□□□□ -0.21
TRIM39-205ENST00000396551 UTF1Q5T230 341 aa13.75□□□□□ -0.21
TRIM39-205ENST00000396551 H2BFWTQ7Z2G1 175 aa13.75□□□□□ -0.21
TRIM39-205ENST00000396551 MBD3L1Q8WWY6 194 aa13.75□□□□□ -0.21
TRIM39-205ENST00000396551 SPINK9Q5DT21 86 aa13.74□□□□□ -0.21
TRIM39-205ENST00000396551 LCN15Q6UWW0 184 aa13.74□□□□□ -0.21
TRIM39-205ENST00000396551 DTD1Q8TEA8 209 aa13.74□□□□□ -0.21
TRIM39-205ENST00000396551 RCC1LQ96I51 464 aaKnown RBP13.74□□□□□ -0.21
TRIM39-205ENST00000396551 GNG12Q9UBI6 72 aa13.74□□□□□ -0.21
TRIM39-205ENST00000396551 JPT1Q9UK76 154 aa13.74□□□□□ -0.21
TRIM39-205ENST00000396551 A8MXE2 369 aa13.74□□□□□ -0.21
TRIM39-205ENST00000396551 H3BQ15 152 aa13.74□□□□□ -0.21
TRIM39-205ENST00000396551 IGHV3-7P01780 117 aa13.74□□□□□ -0.21
TRIM39-205ENST00000396551 GPR12P47775 334 aa13.74□□□□□ -0.21
TRIM39-205ENST00000396551 ZNF134P52741 427 aa13.74□□□□□ -0.21
TRIM39-205ENST00000396551 RAB2AP61019 212 aa13.74□□□□□ -0.21
TRIM39-205ENST00000396551 SERF2P84101 59 aa13.74□□□□□ -0.21
TRIM39-205ENST00000396551 ZNF665Q9H7R5 613 aa13.74□□□□□ -0.21
TRIM39-205ENST00000396551 MARCH11A6NNE9 402 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 NBL1P41271 181 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 FGF8P55075 233 aaPredicted RBP13.73□□□□□ -0.21
TRIM39-205ENST00000396551 RPS16P62249 146 aaKnown RBP13.73□□□□□ -0.21
TRIM39-205ENST00000396551 KHDC3LQ587J8 217 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 DUX4L9Q6RFH8 374 aaPredicted RBP13.73□□□□□ -0.21
TRIM39-205ENST00000396551 EDARADDQ8WWZ3 215 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 GNG13Q9P2W3 67 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 F2RL2O00254 374 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 ATXN7O15265 892 aaPredicted RBP13.73□□□□□ -0.21
TRIM39-205ENST00000396551 YPEL1O60688 119 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 EIF3GO75821 320 aaKnown RBP eCLIP13.73□□□□□ -0.21
TRIM39-205ENST00000396551 OR9G9P0C7N8 305 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 CCKARP32238 428 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 EDDM3BP56851 147 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 HNF4GQ14541 408 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 ZNF787Q6DD87 383 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 PPP1R35Q8TAP8 253 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 YPEL2Q96QA6 119 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 TANC2Q9HCD6 1990 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 IGKV1D-33P01593 117 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 IGKV1-33P01594 117 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 MT-ND4LP03901 98 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 BMP5P22003 454 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 ELLP55199 621 aaPredicted RBP13.73□□□□□ -0.21
TRIM39-205ENST00000396551 RPS23P62266 143 aaKnown RBP13.73□□□□□ -0.21
TRIM39-205ENST00000396551 TMEM41BQ5BJD5 291 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 Q8TCH9 128 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 R3HDM4Q96D70 268 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 LAMP3Q9UQV4 416 aa13.73□□□□□ -0.21
TRIM39-205ENST00000396551 ICE1Q9Y2F5 2266 aa13.72□□□□□ -0.21
TRIM39-205ENST00000396551 CUL9Q8IWT3 2517 aa13.72□□□□□ -0.21
TRIM39-205ENST00000396551 CGB3P0DN86 165 aa13.72□□□□□ -0.21
TRIM39-205ENST00000396551 CGB7P0DN87 165 aa13.72□□□□□ -0.21
TRIM39-205ENST00000396551 KRTCAP3Q53RY4 240 aa13.72□□□□□ -0.21
TRIM39-205ENST00000396551 RPL39P5Q59GN2 51 aa13.72□□□□□ -0.21
TRIM39-205ENST00000396551 RAB39BQ96DA2 213 aa13.72□□□□□ -0.21
TRIM39-205ENST00000396551 IFI27L2Q9H2X8 130 aa13.72□□□□□ -0.21
TRIM39-205ENST00000396551 SLC31A2O15432 143 aa13.72□□□□□ -0.21
TRIM39-205ENST00000396551 GATA4P43694 442 aa13.72□□□□□ -0.21
TRIM39-205ENST00000396551 C1orf229Q6ZS94 237 aaPredicted RBP13.72□□□□□ -0.21
TRIM39-205ENST00000396551 ZNF429Q86V71 674 aa13.72□□□□□ -0.21
TRIM39-205ENST00000396551 FAM24BQ8N5W8 94 aa13.72□□□□□ -0.21
TRIM39-205ENST00000396551 FAM222BQ8WU58 562 aa13.72□□□□□ -0.21
TRIM39-205ENST00000396551 QTRT1Q9BXR0 403 aaKnown RBP13.72□□□□□ -0.21
TRIM39-205ENST00000396551 UNKLQ9H9P5 680 aaKnown RBP13.72□□□□□ -0.21
TRIM39-205ENST00000396551 FCGR3BO75015 233 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms