RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 PRR25Q96S07 402 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 CHCHD6Q9BRQ6 235 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 GON7Q9BXV9 100 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 OR51E2Q9H255 320 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 TXNL4BQ9NX01 149 aaKnown RBP6.84□□□□□ -1.31
ATG4A-205ENST00000394892 SDHAF2Q9NX18 166 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 METTL1Q9UBP6 276 aaKnown RBP6.84□□□□□ -1.31
ATG4A-205ENST00000394892 WASHC3Q9Y3C0 194 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 A3GALT2U3KPV4 340 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 TENM3Q9P273 2699 aa6.84□□□□□ -1.31
ATG4A-205ENST00000394892 LINC00473A8K010 186 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 SEC14L6B5MCN3 397 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 M0R1X1 148 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 HSPA12AO43301 675 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 RBBP9O75884 186 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 CA2P00918 260 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 IGLV2-14P01704 120 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 TFAP2AP05549 437 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 OR5H8P0DN80 308 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 GALP22466 123 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 FGF9P31371 208 aaPredicted RBP6.83□□□□□ -1.32
ATG4A-205ENST00000394892 MC5RP33032 325 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 PSMD7P51665 324 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 SLURP1P55000 103 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 ZNF562Q6V9R5 426 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 Q6ZS49 121 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 PPP1R27Q86WC6 154 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 H1FOOQ8IZA3 346 aaPredicted RBP6.83□□□□□ -1.32
ATG4A-205ENST00000394892 LFNGQ8NES3 379 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 OR5H6Q8NGV6 325 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 EDARADDQ8WWZ3 215 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 DDB2Q92466 427 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 DLX4Q92988 240 aaPredicted RBP6.83□□□□□ -1.32
ATG4A-205ENST00000394892 RNF5Q99942 180 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 VCX3BQ9H321 246 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 MGAT4AQ9UM21 535 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 VSIG4Q9Y279 399 aa6.83□□□□□ -1.32
ATG4A-205ENST00000394892 IGHV4OR15-8A0A075B7B6 117 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 A0A087WW49 117 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 IGKV1D-13A0A0B4J2D9 117 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 A0A1W2PN81 502 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 NOTOA8MTQ0 251 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 H7C2Y5 167 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 PDCD5O14737 125 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 SLC25A17O43808 307 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 MRPS14O60783 128 aaKnown RBP6.82□□□□□ -1.32
ATG4A-205ENST00000394892 IGHV3-11P01762 117 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 GSTP1P09211 210 aaKnown RBP6.82□□□□□ -1.32
ATG4A-205ENST00000394892 IGKV1-13P0DP09 117 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 PSMB9P28065 219 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 CHRNA7P36544 502 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 BRWD1-AS2P59051 145 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 RPS16P62249 146 aaKnown RBP6.82□□□□□ -1.32
ATG4A-205ENST00000394892 DEFA5Q01523 94 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 ZNF616Q08AN1 781 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 ZNF260Q3ZCT1 412 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 CDNFQ49AH0 187 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 AKIRIN2Q53H80 203 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.82□□□□□ -1.32
ATG4A-205ENST00000394892 OR5M8Q8NGP6 311 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 NUDCD2Q8WVJ2 157 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 SLC25A38Q96DW6 304 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 RHOVQ96L33 236 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 MS4A10Q96PG2 267 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 OR2D2Q9H210 308 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 GHITMQ9H3K2 345 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 SLC35D1Q9NTN3 355 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 KIAA1456Q9P272 454 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 ZNF221Q9UK13 617 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 BLOC1S6Q9UL45 172 aa6.82□□□□□ -1.32
ATG4A-205ENST00000394892 FOXA2Q9Y261 457 aaPredicted RBP6.82□□□□□ -1.32
ATG4A-205ENST00000394892 TMEM235A6NFC5 223 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 SPDEFO95238 335 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 DIRAS3O95661 229 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 LGALS1P09382 135 aaKnown RBP6.81□□□□□ -1.32
ATG4A-205ENST00000394892 PTHLHP12272 177 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 GADD45AP24522 165 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 MYL9P24844 172 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 DUTP33316 252 aaKnown RBP6.81□□□□□ -1.32
ATG4A-205ENST00000394892 SDC2P34741 201 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 TGFBR1P36897 503 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 ECI1P42126 302 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 RPL30P62888 115 aaKnown RBP6.81□□□□□ -1.32
ATG4A-205ENST00000394892 EIF4EBP1Q13541 118 aaPredicted RBP6.81□□□□□ -1.32
ATG4A-205ENST00000394892 FXYD3Q14802 87 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 SRSF7Q16629 238 aaKnown RBP eCLIP6.81□□□□□ -1.32
ATG4A-205ENST00000394892 TMEM177Q53S58 311 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 C9orf66Q5T8R8 295 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 TMEM65Q6PI78 240 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 ZNF773Q6PK81 442 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 UNQ5815/PRO19632Q6UWF5 114 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 PDPNQ86YL7 162 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 BVESQ8NE79 360 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 LGALS14Q8TCE9 139 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 FLYWCH2Q96CP2 140 aaKnown RBP6.81□□□□□ -1.32
ATG4A-205ENST00000394892 ATG5Q9H1Y0 275 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 DAPK2Q9UIK4 370 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 STUB1Q9UNE7 303 aa6.81□□□□□ -1.32
ATG4A-205ENST00000394892 A0A1B0GW64 132 aa6.8□□□□□ -1.32
ATG4A-205ENST00000394892 J3QRK9 145 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms