RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 DEFB108AA8MXU0 73 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 HSPA12AO43301 675 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 KRASP01116 189 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 DUTP33316 252 aaKnown RBP12.75□□□□□ -0.37
CPSF7-202ENST00000394888 TFF3Q07654 80 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 C17orf58Q2M2W7 97 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 KHDC3LQ587J8 217 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 FAM222BQ8WU58 562 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 LRRC29Q8WV35 223 aa12.75□□□□□ -0.37
CPSF7-202ENST00000394888 CISD1Q9NZ45 108 aaKnown RBP12.75□□□□□ -0.37
CPSF7-202ENST00000394888 CLDN14O95500 239 aa12.74□□□□□ -0.37
CPSF7-202ENST00000394888 PRDX2P32119 198 aa12.74□□□□□ -0.37
CPSF7-202ENST00000394888 CD81P60033 236 aa12.74□□□□□ -0.37
CPSF7-202ENST00000394888 RAB2AP61019 212 aa12.74□□□□□ -0.37
CPSF7-202ENST00000394888 P2RY6Q15077 328 aa12.74□□□□□ -0.37
CPSF7-202ENST00000394888 MORN2Q502X0 79 aa12.74□□□□□ -0.37
CPSF7-202ENST00000394888 BEND4Q6ZU67 534 aa12.74□□□□□ -0.37
CPSF7-202ENST00000394888 RFESDQ8TAC1 157 aa12.74□□□□□ -0.37
CPSF7-202ENST00000394888 PUS1Q9Y606 427 aaKnown RBP eCLIP12.74□□□□□ -0.37
CPSF7-202ENST00000394888 IGHV3OR15-7A0A075B7D8 119 aa12.74□□□□□ -0.37
CPSF7-202ENST00000394888 URB1O60287 2271 aaKnown RBP12.74□□□□□ -0.37
CPSF7-202ENST00000394888 SPANXN5Q5MJ07 72 aa12.74□□□□□ -0.37
CPSF7-202ENST00000394888 ZNF251Q9BRH9 671 aa12.74□□□□□ -0.37
CPSF7-202ENST00000394888 F2RL2O00254 374 aa12.74□□□□□ -0.37
CPSF7-202ENST00000394888 DEFA4P12838 97 aa12.74□□□□□ -0.37
CPSF7-202ENST00000394888 RPL35P42766 123 aaKnown RBP12.74□□□□□ -0.37
CPSF7-202ENST00000394888 DLK1P80370 383 aa12.74□□□□□ -0.37
CPSF7-202ENST00000394888 SOHLH1Q5JUK2 328 aa12.74□□□□□ -0.37
CPSF7-202ENST00000394888 SSX3Q99909 188 aa12.74□□□□□ -0.37
CPSF7-202ENST00000394888 BIN3Q9NQY0 253 aa12.74□□□□□ -0.37
CPSF7-202ENST00000394888 GABRA2P47869 451 aa12.73□□□□□ -0.37
CPSF7-202ENST00000394888 VPS13CQ709C8 3753 aa12.73□□□□□ -0.37
CPSF7-202ENST00000394888 BCL2P10415 239 aa12.73□□□□□ -0.37
CPSF7-202ENST00000394888 TMEM41BQ5BJD5 291 aa12.73□□□□□ -0.37
CPSF7-202ENST00000394888 FAM201AQ5SY85 155 aa12.73□□□□□ -0.37
CPSF7-202ENST00000394888 PRSS33Q8NF86 280 aa12.73□□□□□ -0.37
CPSF7-202ENST00000394888 CD300LFQ8TDQ1 290 aa12.73□□□□□ -0.37
CPSF7-202ENST00000394888 M0R036 132 aa12.73□□□□□ -0.37
CPSF7-202ENST00000394888 RAB29O14966 203 aa12.73□□□□□ -0.37
CPSF7-202ENST00000394888 SLC38A11Q08AI6 406 aa12.73□□□□□ -0.37
CPSF7-202ENST00000394888 RTP5Q14D33 572 aa12.73□□□□□ -0.37
CPSF7-202ENST00000394888 ZNF718Q3SXZ3 478 aa12.73□□□□□ -0.37
CPSF7-202ENST00000394888 AKR1C8PQ5T2L2 129 aa12.73□□□□□ -0.37
CPSF7-202ENST00000394888 WDR25Q64LD2 544 aaPredicted RBP12.73□□□□□ -0.37
CPSF7-202ENST00000394888 ZNF429Q86V71 674 aa12.73□□□□□ -0.37
CPSF7-202ENST00000394888 ZNRF1Q8ND25 227 aa12.73□□□□□ -0.37
CPSF7-202ENST00000394888 OR2Z1Q8NG97 314 aa12.73□□□□□ -0.37
CPSF7-202ENST00000394888 QTRT1Q9BXR0 403 aaKnown RBP12.73□□□□□ -0.37
CPSF7-202ENST00000394888 UBE2L5PA0A1B0GUS4 154 aa12.72□□□□□ -0.37
CPSF7-202ENST00000394888 GATAD1Q8WUU5 269 aa12.72□□□□□ -0.37
CPSF7-202ENST00000394888 PROCRQ9UNN8 238 aa12.72□□□□□ -0.37
CPSF7-202ENST00000394888 TIMM9Q9Y5J7 89 aa12.72□□□□□ -0.37
CPSF7-202ENST00000394888 TRAV3A0A0B4J244 114 aa12.72□□□□□ -0.37
CPSF7-202ENST00000394888 SERF2P84101 59 aa12.72□□□□□ -0.37
CPSF7-202ENST00000394888 TLE4Q04727 773 aa12.72□□□□□ -0.37
CPSF7-202ENST00000394888 C3orf36Q3SXR2 165 aa12.72□□□□□ -0.37
CPSF7-202ENST00000394888 SPINK9Q5DT21 86 aa12.72□□□□□ -0.37
CPSF7-202ENST00000394888 SMIM21Q3B7S5 101 aa12.72□□□□□ -0.37
CPSF7-202ENST00000394888 Q3ZCU0 254 aa12.72□□□□□ -0.37
CPSF7-202ENST00000394888 ZNF439Q8NDP4 499 aa12.72□□□□□ -0.37
CPSF7-202ENST00000394888 PSG11Q9UQ72 335 aa12.72□□□□□ -0.37
CPSF7-202ENST00000394888 MARCH11A6NNE9 402 aa12.71□□□□□ -0.37
CPSF7-202ENST00000394888 S100GP29377 79 aa12.71□□□□□ -0.37
CPSF7-202ENST00000394888 CEACAM8P31997 349 aaPredicted RBP12.71□□□□□ -0.37
CPSF7-202ENST00000394888 RPL39P5Q59GN2 51 aa12.71□□□□□ -0.37
CPSF7-202ENST00000394888 ZNF66Q6ZN08 573 aa12.71□□□□□ -0.37
CPSF7-202ENST00000394888 TMPRSS5Q9H3S3 457 aa12.71□□□□□ -0.37
CPSF7-202ENST00000394888 ZNF83P51522 516 aa12.71□□□□□ -0.38
CPSF7-202ENST00000394888 RPS16P62249 146 aaKnown RBP12.71□□□□□ -0.38
CPSF7-202ENST00000394888 SLC35E3Q7Z769 313 aa12.71□□□□□ -0.38
CPSF7-202ENST00000394888 OR2V2Q96R30 315 aa12.71□□□□□ -0.38
CPSF7-202ENST00000394888 GNG13Q9P2W3 67 aa12.71□□□□□ -0.38
CPSF7-202ENST00000394888 DUSP13Q9UII6 198 aa12.71□□□□□ -0.38
CPSF7-202ENST00000394888 SSUH2Q9Y2M2 353 aa12.71□□□□□ -0.38
CPSF7-202ENST00000394888 CLDN1O95832 211 aa12.7□□□□□ -0.38
CPSF7-202ENST00000394888 IL2RGP31785 369 aa12.7□□□□□ -0.38
CPSF7-202ENST00000394888 VDAC2P45880 294 aaPredicted RBP12.7□□□□□ -0.38
CPSF7-202ENST00000394888 TIMM23BQ5SRD1 257 aa12.7□□□□□ -0.38
CPSF7-202ENST00000394888 DCAF16Q9NXF7 216 aa12.7□□□□□ -0.38
CPSF7-202ENST00000394888 METTL1Q9UBP6 276 aaKnown RBP12.7□□□□□ -0.38
CPSF7-202ENST00000394888 SVILO95425 2214 aa12.7□□□□□ -0.38
CPSF7-202ENST00000394888 RNF212BA8MTL3 300 aa12.7□□□□□ -0.38
CPSF7-202ENST00000394888 NPPCP23582 126 aa12.7□□□□□ -0.38
CPSF7-202ENST00000394888 GATA4P43694 442 aa12.7□□□□□ -0.38
CPSF7-202ENST00000394888 LCN15Q6UWW0 184 aa12.7□□□□□ -0.38
CPSF7-202ENST00000394888 PLPPR2Q96GM1 343 aa12.7□□□□□ -0.38
CPSF7-202ENST00000394888 C12orf57Q99622 126 aa12.7□□□□□ -0.38
CPSF7-202ENST00000394888 KCNIP1Q9NZI2 227 aa12.7□□□□□ -0.38
CPSF7-202ENST00000394888 TGIF2-C20orf24A0A0A6YYL0 155 aa12.7□□□□□ -0.38
CPSF7-202ENST00000394888 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.7□□□□□ -0.38
CPSF7-202ENST00000394888 CTAG1AP78358 180 aa12.7□□□□□ -0.38
CPSF7-202ENST00000394888 ZNF787Q6DD87 383 aa12.7□□□□□ -0.38
CPSF7-202ENST00000394888 TCTEX1D2Q8WW35 142 aa12.7□□□□□ -0.38
CPSF7-202ENST00000394888 DIRC2Q96SL1 478 aa12.7□□□□□ -0.38
CPSF7-202ENST00000394888 YPEL1O60688 119 aa12.69□□□□□ -0.38
CPSF7-202ENST00000394888 IFNA4P05014 189 aa12.69□□□□□ -0.38
CPSF7-202ENST00000394888 IL6RP08887 468 aaPredicted RBP12.69□□□□□ -0.38
CPSF7-202ENST00000394888 GNB2P62879 340 aa12.69□□□□□ -0.38
CPSF7-202ENST00000394888 DTD1Q8TEA8 209 aa12.69□□□□□ -0.38
CPSF7-202ENST00000394888 YPEL2Q96QA6 119 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms