RNA–Protein interactions for RNA: ENST00000394202.8

CNN3-202, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-202ENST00000394202 TMEM249Q2WGJ8 235 aa18.9■□□□□ 0.62
CNN3-202ENST00000394202 ZNF833PQ6ZTB9 187 aa18.9■□□□□ 0.62
CNN3-202ENST00000394202 LINC01356Q8N9X3 169 aa18.9■□□□□ 0.62
CNN3-202ENST00000394202 PHB2Q99623 299 aa18.9■□□□□ 0.62
CNN3-202ENST00000394202 TMEM222Q9H0R3 208 aa18.9■□□□□ 0.62
CNN3-202ENST00000394202 HEXA-AS1Q9H8Q6 139 aa18.9■□□□□ 0.62
CNN3-202ENST00000394202 IGHV4-31P0DP07 118 aa18.9■□□□□ 0.62
CNN3-202ENST00000394202 PRRX1P54821 245 aa18.9■□□□□ 0.62
CNN3-202ENST00000394202 ZNF585BQ52M93 769 aa18.9■□□□□ 0.62
CNN3-202ENST00000394202 DCAF12L2Q5VW00 463 aa18.9■□□□□ 0.62
CNN3-202ENST00000394202 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.9■□□□□ 0.62
CNN3-202ENST00000394202 BEND2Q8NDZ0 799 aa18.9■□□□□ 0.62
CNN3-202ENST00000394202 TCTEX1D2Q8WW35 142 aa18.9■□□□□ 0.62
CNN3-202ENST00000394202 TMEM186Q96B77 213 aa18.9■□□□□ 0.62
CNN3-202ENST00000394202 H0Y980 276 aa18.89■□□□□ 0.61
CNN3-202ENST00000394202 BUB1B-PAK6H3BSN5 160 aa18.89■□□□□ 0.61
CNN3-202ENST00000394202 SIX6O95475 246 aa18.89■□□□□ 0.61
CNN3-202ENST00000394202 ARG1P05089 322 aa18.89■□□□□ 0.61
CNN3-202ENST00000394202 SULT1A3P0DMM9 295 aa18.89■□□□□ 0.61
CNN3-202ENST00000394202 SULT1A4P0DMN0 295 aa18.89■□□□□ 0.61
CNN3-202ENST00000394202 GZMKP49863 264 aa18.89■□□□□ 0.61
CNN3-202ENST00000394202 LHX4Q969G2 390 aa18.89■□□□□ 0.61
CNN3-202ENST00000394202 HSD17B10Q99714 261 aaKnown RBP18.89■□□□□ 0.61
CNN3-202ENST00000394202 DBX1A6NMT0 343 aa18.88■□□□□ 0.61
CNN3-202ENST00000394202 CCSO14618 274 aa18.88■□□□□ 0.61
CNN3-202ENST00000394202 ADAP1O75689 374 aa18.88■□□□□ 0.61
CNN3-202ENST00000394202 CT45A6P0DMU7 189 aa18.88■□□□□ 0.61
CNN3-202ENST00000394202 CT45A5P0DMU8 189 aa18.88■□□□□ 0.61
CNN3-202ENST00000394202 CT45A7P0DMV0 189 aa18.88■□□□□ 0.61
CNN3-202ENST00000394202 ZNF66Q6ZN08 573 aa18.88■□□□□ 0.61
CNN3-202ENST00000394202 LIAT1Q6ZQX7 453 aa18.88■□□□□ 0.61
CNN3-202ENST00000394202 ZNF383Q8NA42 475 aa18.88■□□□□ 0.61
CNN3-202ENST00000394202 WDR89Q96FK6 387 aaPredicted RBP18.88■□□□□ 0.61
CNN3-202ENST00000394202 S1PR3Q99500 378 aa18.88■□□□□ 0.61
CNN3-202ENST00000394202 CSPG4Q6UVK1 2322 aa18.88■□□□□ 0.61
CNN3-202ENST00000394202 ABCA1O95477 2261 aa18.88■□□□□ 0.61
CNN3-202ENST00000394202 ODF3BA8MYP8 253 aa18.88■□□□□ 0.61
CNN3-202ENST00000394202 ANXA3P12429 323 aa18.88■□□□□ 0.61
CNN3-202ENST00000394202 UCP1P25874 307 aa18.88■□□□□ 0.61
CNN3-202ENST00000394202 PAX6P26367 422 aa18.88■□□□□ 0.61
CNN3-202ENST00000394202 ZNF137PP52743 207 aa18.88■□□□□ 0.61
CNN3-202ENST00000394202 LHFPL4Q7Z7J7 247 aa18.88■□□□□ 0.61
CNN3-202ENST00000394202 GON7Q9BXV9 100 aa18.88■□□□□ 0.61
CNN3-202ENST00000394202 MRPL20Q9BYC9 149 aaKnown RBP18.88■□□□□ 0.61
CNN3-202ENST00000394202 TGFAP01135 160 aa18.87■□□□□ 0.61
CNN3-202ENST00000394202 DDB2Q92466 427 aa18.87■□□□□ 0.61
CNN3-202ENST00000394202 MGAT4CQ9UBM8 478 aa18.87■□□□□ 0.61
CNN3-202ENST00000394202 BOLA1Q9Y3E2 137 aa18.87■□□□□ 0.61
CNN3-202ENST00000394202 OTOGQ6ZRI0 2925 aa18.87■□□□□ 0.61
CNN3-202ENST00000394202 MPTX1A8MV57 137 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 GOSR2O14653 212 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 CDS2O95674 445 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 AVPP01185 164 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 IGKV1-39P01597 117 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 IGKV1D-39P04432 117 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 LYZL2Q7Z4W2 148 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 COQ8AQ8NI60 647 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 GRPEL2Q8TAA5 225 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 C17orf50Q8WW18 174 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 C7orf69Q9H7B7 122 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 PLSCR3Q9NRY6 295 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 LIN7CQ9NUP9 197 aaKnown RBP18.86■□□□□ 0.61
CNN3-202ENST00000394202 ZFHX3Q15911 3703 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 TRAV20A0A0B4J274 112 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 LY6LH3BQJ8 138 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 H2BFSP57053 126 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 C11orf88Q6PI97 169 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 SPAG16Q8N0X2 631 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 TMEM56Q96MV1 263 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 AUP1Q9Y679 476 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 TMEM56-RWDD3S4R434 201 aa18.86■□□□□ 0.61
CNN3-202ENST00000394202 A0A0B4J2A0 478 aa18.85■□□□□ 0.61
CNN3-202ENST00000394202 RNF212BA8MTL3 300 aa18.85■□□□□ 0.61
CNN3-202ENST00000394202 HOXB5P09067 269 aa18.85■□□□□ 0.61
CNN3-202ENST00000394202 ZNF816Q0VGE8 651 aaPredicted RBP18.85■□□□□ 0.61
CNN3-202ENST00000394202 CATR1Q13166 79 aa18.85■□□□□ 0.61
CNN3-202ENST00000394202 TMEM268Q5VZI3 342 aa18.85■□□□□ 0.61
CNN3-202ENST00000394202 SELENOHQ8IZQ5 122 aaKnown RBP18.85■□□□□ 0.61
CNN3-202ENST00000394202 SHPKQ9UHJ6 478 aa18.85■□□□□ 0.61
CNN3-202ENST00000394202 ACANP16112 2415 aa18.84■□□□□ 0.61
CNN3-202ENST00000394202 IGHV3OR16-10A0A075B7F0 116 aa18.84■□□□□ 0.61
CNN3-202ENST00000394202 CENPVL3A0A0U1RRI6 287 aa18.84■□□□□ 0.61
CNN3-202ENST00000394202 SERPINE2P07093 398 aa18.84■□□□□ 0.61
CNN3-202ENST00000394202 SLC35G3Q8N808 338 aa18.84■□□□□ 0.61
CNN3-202ENST00000394202 LRTM2Q8N967 370 aa18.84■□□□□ 0.61
CNN3-202ENST00000394202 C18orf12Q96KH6 178 aa18.84■□□□□ 0.61
CNN3-202ENST00000394202 TLN2Q9Y4G6 2542 aa18.84■□□□□ 0.61
CNN3-202ENST00000394202 SMAD7O15105 426 aaKnown RBP18.84■□□□□ 0.61
CNN3-202ENST00000394202 FCGR3BO75015 233 aa18.84■□□□□ 0.61
CNN3-202ENST00000394202 LPAR6P43657 344 aa18.84■□□□□ 0.61
CNN3-202ENST00000394202 LGI3Q8N145 548 aa18.84■□□□□ 0.61
CNN3-202ENST00000394202 HTR1DP28221 377 aa18.83■□□□□ 0.61
CNN3-202ENST00000394202 UBE2E1P51965 193 aa18.83■□□□□ 0.61
CNN3-202ENST00000394202 NABP2Q9BQ15 211 aa18.83■□□□□ 0.61
CNN3-202ENST00000394202 HILPDAQ9Y5L2 63 aa18.83■□□□□ 0.61
CNN3-202ENST00000394202 THBS3P49746 956 aa18.82■□□□□ 0.6
CNN3-202ENST00000394202 Q5BKY6 102 aa18.82■□□□□ 0.6
CNN3-202ENST00000394202 TGIF2LXQ8IUE1 241 aa18.82■□□□□ 0.6
CNN3-202ENST00000394202 ZNF695Q8IW36 515 aa18.82■□□□□ 0.6
CNN3-202ENST00000394202 DYNAPQ8N1N2 210 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms