RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 MMP24Q9Y5R2 645 aa15.64■□□□□ 0.09
CLDND1-203ENST00000394181 ANKRD34BA5PLL1 514 aa15.63■□□□□ 0.09
CLDND1-203ENST00000394181 RNF224P0DH78 156 aa15.63■□□□□ 0.09
CLDND1-203ENST00000394181 EWSR1Q01844 656 aaKnown RBP eCLIP15.63■□□□□ 0.09
CLDND1-203ENST00000394181 RAB9BQ9NP90 201 aa15.63■□□□□ 0.09
CLDND1-203ENST00000394181 AUP1Q9Y679 476 aa15.63■□□□□ 0.09
CLDND1-203ENST00000394181 EPG5Q9HCE0 2579 aa15.63■□□□□ 0.09
CLDND1-203ENST00000394181 H3BP45 60 aa15.63■□□□□ 0.09
CLDND1-203ENST00000394181 WRBO00258 174 aa15.63■□□□□ 0.09
CLDND1-203ENST00000394181 ITGB1BP1O14713 200 aa15.63■□□□□ 0.09
CLDND1-203ENST00000394181 S100A1P23297 94 aa15.63■□□□□ 0.09
CLDND1-203ENST00000394181 GPR157Q5UAW9 335 aa15.63■□□□□ 0.09
CLDND1-203ENST00000394181 ZNF841Q6ZN19 808 aa15.63■□□□□ 0.09
CLDND1-203ENST00000394181 COMMD7Q86VX2 200 aa15.63■□□□□ 0.09
CLDND1-203ENST00000394181 VKORC1L1Q8N0U8 176 aa15.63■□□□□ 0.09
CLDND1-203ENST00000394181 LYRM2Q9NU23 88 aaPredicted RBP15.63■□□□□ 0.09
CLDND1-203ENST00000394181 NDUFA2O43678 99 aa15.62■□□□□ 0.09
CLDND1-203ENST00000394181 NDUFS7O75251 213 aa15.62■□□□□ 0.09
CLDND1-203ENST00000394181 IAPPP10997 89 aa15.62■□□□□ 0.09
CLDND1-203ENST00000394181 IGFBP2P18065 325 aa15.62■□□□□ 0.09
CLDND1-203ENST00000394181 CDKN1AP38936 164 aa15.62■□□□□ 0.09
CLDND1-203ENST00000394181 RAB7AP51149 207 aa15.62■□□□□ 0.09
CLDND1-203ENST00000394181 DLX1P56177 255 aa15.62■□□□□ 0.09
CLDND1-203ENST00000394181 VAMP2P63027 116 aa15.62■□□□□ 0.09
CLDND1-203ENST00000394181 MRPS11P82912 194 aaKnown RBP15.62■□□□□ 0.09
CLDND1-203ENST00000394181 HEPN1Q6WQI6 88 aa15.62■□□□□ 0.09
CLDND1-203ENST00000394181 TMEM252Q8N6L7 170 aa15.62■□□□□ 0.09
CLDND1-203ENST00000394181 PHYHIPLQ96FC7 376 aa15.62■□□□□ 0.09
CLDND1-203ENST00000394181 GAL3ST2Q9H3Q3 398 aa15.62■□□□□ 0.09
CLDND1-203ENST00000394181 UBTD1Q9HAC8 227 aa15.62■□□□□ 0.09
CLDND1-203ENST00000394181 USP9XQ93008 2570 aaPredicted RBP15.62■□□□□ 0.09
CLDND1-203ENST00000394181 TAAR5O14804 337 aa15.62■□□□□ 0.09
CLDND1-203ENST00000394181 CST7O76096 145 aa15.62■□□□□ 0.09
CLDND1-203ENST00000394181 DLX6P56179 175 aa15.62■□□□□ 0.09
CLDND1-203ENST00000394181 MIDNQ504T8 468 aa15.62■□□□□ 0.09
CLDND1-203ENST00000394181 SLC25A48Q6ZT89 311 aaKnown RBP15.62■□□□□ 0.09
CLDND1-203ENST00000394181 DTX2Q86UW9 622 aa15.62■□□□□ 0.09
CLDND1-203ENST00000394181 PLA2G2EQ9NZK7 142 aa15.62■□□□□ 0.09
CLDND1-203ENST00000394181 RAB29O14966 203 aa15.61■□□□□ 0.09
CLDND1-203ENST00000394181 RRASP10301 218 aa15.61■□□□□ 0.09
CLDND1-203ENST00000394181 DAOP14920 347 aa15.61■□□□□ 0.09
CLDND1-203ENST00000394181 PVALBP20472 110 aaPredicted RBP15.61■□□□□ 0.09
CLDND1-203ENST00000394181 PRB3Q04118 309 aaPredicted RBP15.61■□□□□ 0.09
CLDND1-203ENST00000394181 ZNF383Q8NA42 475 aa15.61■□□□□ 0.09
CLDND1-203ENST00000394181 DDB2Q92466 427 aa15.61■□□□□ 0.09
CLDND1-203ENST00000394181 PIGBOS1A0A0B4J2F0 54 aa15.6■□□□□ 0.09
CLDND1-203ENST00000394181 SSX9Q7RTT3 188 aa15.6■□□□□ 0.09
CLDND1-203ENST00000394181 PDZD9Q8IXQ8 264 aa15.6■□□□□ 0.09
CLDND1-203ENST00000394181 C11orf42Q8N5U0 333 aa15.6■□□□□ 0.09
CLDND1-203ENST00000394181 SLC25A32Q9H2D1 315 aa15.6■□□□□ 0.09
CLDND1-203ENST00000394181 GAB2Q9UQC2 676 aa15.6■□□□□ 0.09
CLDND1-203ENST00000394181 MARCH11A6NNE9 402 aa15.6■□□□□ 0.09
CLDND1-203ENST00000394181 SYNGR2O43760 224 aa15.6■□□□□ 0.09
CLDND1-203ENST00000394181 FBXO24O75426 580 aa15.6■□□□□ 0.09
CLDND1-203ENST00000394181 CLINT1Q14677 625 aa15.6■□□□□ 0.09
CLDND1-203ENST00000394181 TMEM155Q4W5P6 130 aa15.6■□□□□ 0.09
CLDND1-203ENST00000394181 TMEM217Q8N7C4 229 aa15.6■□□□□ 0.09
CLDND1-203ENST00000394181 TCTEX1D1Q8N7M0 179 aa15.6■□□□□ 0.09
CLDND1-203ENST00000394181 R3HDM4Q96D70 268 aa15.6■□□□□ 0.09
CLDND1-203ENST00000394181 FAM212BQ9NTI7 297 aaPredicted RBP15.6■□□□□ 0.09
CLDND1-203ENST00000394181 VPS13CQ709C8 3753 aa15.6■□□□□ 0.09
CLDND1-203ENST00000394181 PPIHO43447 177 aaKnown RBP15.59■□□□□ 0.09
CLDND1-203ENST00000394181 FAM216AQ8WUB2 273 aa15.59■□□□□ 0.09
CLDND1-203ENST00000394181 S1PR3Q99500 378 aa15.59■□□□□ 0.09
CLDND1-203ENST00000394181 MALRD1Q5VYJ5 2156 aa15.59■□□□□ 0.09
CLDND1-203ENST00000394181 ZNF462Q96JM2 2506 aa15.59■□□□□ 0.09
CLDND1-203ENST00000394181 OR9G9P0C7N8 305 aa15.59■□□□□ 0.09
CLDND1-203ENST00000394181 H2BFWTQ7Z2G1 175 aa15.59■□□□□ 0.09
CLDND1-203ENST00000394181 REG4Q9BYZ8 158 aa15.59■□□□□ 0.09
CLDND1-203ENST00000394181 NARFLQ9H6Q4 476 aa15.59■□□□□ 0.09
CLDND1-203ENST00000394181 RFNGQ9Y644 331 aa15.59■□□□□ 0.09
CLDND1-203ENST00000394181 MYO18BQ8IUG5 2567 aa15.59■□□□□ 0.09
CLDND1-203ENST00000394181 TOR1AO14656 332 aa15.58■□□□□ 0.08
CLDND1-203ENST00000394181 FAM157CP0CG43 387 aa15.58■□□□□ 0.08
CLDND1-203ENST00000394181 TMEM267Q0VDI3 215 aaPredicted RBP15.58■□□□□ 0.08
CLDND1-203ENST00000394181 SPINK9Q5DT21 86 aa15.58■□□□□ 0.08
CLDND1-203ENST00000394181 CD300LFQ8TDQ1 290 aa15.58■□□□□ 0.08
CLDND1-203ENST00000394181 RBKSQ9H477 322 aa15.58■□□□□ 0.08
CLDND1-203ENST00000394181 BARX1Q9HBU1 254 aaPredicted RBP15.58■□□□□ 0.08
CLDND1-203ENST00000394181 COA4Q9NYJ1 87 aa15.58■□□□□ 0.08
CLDND1-203ENST00000394181 A6NNC1 897 aa15.58■□□□□ 0.08
CLDND1-203ENST00000394181 JTBO76095 146 aa15.58■□□□□ 0.08
CLDND1-203ENST00000394181 HPRT1P00492 218 aa15.58■□□□□ 0.08
CLDND1-203ENST00000394181 GAPDHP04406 335 aaKnown RBP15.58■□□□□ 0.08
CLDND1-203ENST00000394181 CT45A6P0DMU7 189 aa15.58■□□□□ 0.08
CLDND1-203ENST00000394181 CT45A5P0DMU8 189 aa15.58■□□□□ 0.08
CLDND1-203ENST00000394181 CT45A7P0DMV0 189 aa15.58■□□□□ 0.08
CLDND1-203ENST00000394181 MMP9P14780 707 aa15.58■□□□□ 0.08
CLDND1-203ENST00000394181 DYNLT3P51808 116 aa15.58■□□□□ 0.08
CLDND1-203ENST00000394181 UBE2KP61086 200 aa15.58■□□□□ 0.08
CLDND1-203ENST00000394181 TNFRSF9Q07011 255 aa15.58■□□□□ 0.08
CLDND1-203ENST00000394181 DIAPH2-AS1Q14236 149 aa15.58■□□□□ 0.08
CLDND1-203ENST00000394181 OR10A7Q8NGE5 316 aa15.58■□□□□ 0.08
CLDND1-203ENST00000394181 AKAP6Q13023 2319 aa15.58■□□□□ 0.08
CLDND1-203ENST00000394181 TRAV3A0A0B4J244 114 aa15.57■□□□□ 0.08
CLDND1-203ENST00000394181 UBAC2Q8NBM4 344 aa15.57■□□□□ 0.08
CLDND1-203ENST00000394181 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.57■□□□□ 0.08
CLDND1-203ENST00000394181 OR5C1Q8NGR4 320 aa15.57■□□□□ 0.08
CLDND1-203ENST00000394181 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.57■□□□□ 0.08
CLDND1-203ENST00000394181 LPAR3Q9UBY5 353 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms