RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 RPS19P39019 145 aaKnown RBP24.06■■□□□ 1.44
CMTM4-202ENST00000394106 NDPQ00604 133 aa24.06■■□□□ 1.44
CMTM4-202ENST00000394106 RNF152Q8N8N0 203 aa24.06■■□□□ 1.44
CMTM4-202ENST00000394106 ABHD5Q8WTS1 349 aa24.06■■□□□ 1.44
CMTM4-202ENST00000394106 FLYWCH2Q96CP2 140 aaKnown RBP24.06■■□□□ 1.44
CMTM4-202ENST00000394106 DUX3Q96PT4 197 aa24.06■■□□□ 1.44
CMTM4-202ENST00000394106 TSNAXQ99598 290 aaKnown RBP24.06■■□□□ 1.44
CMTM4-202ENST00000394106 SPATA2Q9UM82 520 aa24.06■■□□□ 1.44
CMTM4-202ENST00000394106 CX3CL1P78423 397 aa24.05■■□□□ 1.44
CMTM4-202ENST00000394106 ECSCRQ19T08 205 aa24.05■■□□□ 1.44
CMTM4-202ENST00000394106 CROCCP3Q8IVE0 287 aa24.05■■□□□ 1.44
CMTM4-202ENST00000394106 DIABLOQ9NR28 239 aa24.05■■□□□ 1.44
CMTM4-202ENST00000394106 TRIM64CA6NLI5 447 aa24.04■■□□□ 1.44
CMTM4-202ENST00000394106 CTXN2P0C2S0 81 aa24.04■■□□□ 1.44
CMTM4-202ENST00000394106 PSMB8P28062 276 aa24.04■■□□□ 1.44
CMTM4-202ENST00000394106 MYCNOSP40205 109 aa24.04■■□□□ 1.44
CMTM4-202ENST00000394106 ZNF660Q6AZW8 331 aaPredicted RBP24.04■■□□□ 1.44
CMTM4-202ENST00000394106 RCC1LQ96I51 464 aaKnown RBP24.04■■□□□ 1.44
CMTM4-202ENST00000394106 FBXO7Q9Y3I1 522 aa24.04■■□□□ 1.44
CMTM4-202ENST00000394106 A3GALT2U3KPV4 340 aa24.04■■□□□ 1.44
CMTM4-202ENST00000394106 A0A0A6YYH2 397 aa24.03■■□□□ 1.44
CMTM4-202ENST00000394106 A6NJ64 397 aa24.03■■□□□ 1.44
CMTM4-202ENST00000394106 TMEM127O75204 238 aa24.03■■□□□ 1.44
CMTM4-202ENST00000394106 NFYAP23511 347 aaPredicted RBP24.03■■□□□ 1.44
CMTM4-202ENST00000394106 PPIFP30405 207 aaKnown RBP24.03■■□□□ 1.44
CMTM4-202ENST00000394106 CDX1P47902 265 aaPredicted RBP24.03■■□□□ 1.44
CMTM4-202ENST00000394106 CNIH2Q6PI25 160 aa24.03■■□□□ 1.44
CMTM4-202ENST00000394106 TMEM65Q6PI78 240 aa24.03■■□□□ 1.44
CMTM4-202ENST00000394106 RAX2Q96IS3 184 aa24.03■■□□□ 1.44
CMTM4-202ENST00000394106 ANXA10Q9UJ72 324 aa24.03■■□□□ 1.44
CMTM4-202ENST00000394106 SLC25A17O43808 307 aa24.02■■□□□ 1.44
CMTM4-202ENST00000394106 SPDEFO95238 335 aa24.02■■□□□ 1.44
CMTM4-202ENST00000394106 CBX3Q13185 183 aa24.02■■□□□ 1.44
CMTM4-202ENST00000394106 DEFB136Q30KP8 78 aa24.02■■□□□ 1.44
CMTM4-202ENST00000394106 BVESQ8NE79 360 aa24.02■■□□□ 1.44
CMTM4-202ENST00000394106 FUNDC2Q9BWH2 189 aa24.02■■□□□ 1.44
CMTM4-202ENST00000394106 CA2P00918 260 aa24.01■■□□□ 1.43
CMTM4-202ENST00000394106 FOXB2Q5VYV0 432 aa24.01■■□□□ 1.43
CMTM4-202ENST00000394106 P2RX4Q99571 388 aa24.01■■□□□ 1.43
CMTM4-202ENST00000394106 KLK15Q9H2R5 256 aa24.01■■□□□ 1.43
CMTM4-202ENST00000394106 AUNIPQ9H7T9 357 aa24.01■■□□□ 1.43
CMTM4-202ENST00000394106 TPSG1Q9NRR2 321 aa24.01■■□□□ 1.43
CMTM4-202ENST00000394106 OR2W1Q9Y3N9 320 aa24.01■■□□□ 1.43
CMTM4-202ENST00000394106 CCL24O00175 119 aa24■■□□□ 1.43
CMTM4-202ENST00000394106 LUMP51884 338 aaPredicted RBP24■■□□□ 1.43
CMTM4-202ENST00000394106 RAB25P57735 213 aa24■■□□□ 1.43
CMTM4-202ENST00000394106 RTL8BQ17RB0 113 aa24■■□□□ 1.43
CMTM4-202ENST00000394106 FAM103A1Q9BTL3 118 aaKnown RBP24■■□□□ 1.43
CMTM4-202ENST00000394106 NECAP2Q9NVZ3 263 aa24■■□□□ 1.43
CMTM4-202ENST00000394106 A0A1W2PN81 502 aa23.99■■□□□ 1.43
CMTM4-202ENST00000394106 IGLV1-40P01703 118 aa23.99■■□□□ 1.43
CMTM4-202ENST00000394106 PTHLHP12272 177 aa23.99■■□□□ 1.43
CMTM4-202ENST00000394106 CHRNA7P36544 502 aa23.99■■□□□ 1.43
CMTM4-202ENST00000394106 TAGLNQ01995 201 aaKnown RBP23.99■■□□□ 1.43
CMTM4-202ENST00000394106 PPP1R27Q86WC6 154 aa23.99■■□□□ 1.43
CMTM4-202ENST00000394106 GVQW1Q8N7I0 195 aa23.99■■□□□ 1.43
CMTM4-202ENST00000394106 MINDY2Q8NBR6 621 aa23.99■■□□□ 1.43
CMTM4-202ENST00000394106 BEST4Q8NFU0 473 aa23.99■■□□□ 1.43
CMTM4-202ENST00000394106 ADTRPQ96IZ2 230 aa23.99■■□□□ 1.43
CMTM4-202ENST00000394106 HARBI1Q96MB7 349 aa23.99■■□□□ 1.43
CMTM4-202ENST00000394106 DUS4LO95620 317 aaKnown RBP23.98■■□□□ 1.43
CMTM4-202ENST00000394106 FCER2P06734 321 aa23.98■■□□□ 1.43
CMTM4-202ENST00000394106 EGR2P11161 476 aaPredicted RBP23.98■■□□□ 1.43
CMTM4-202ENST00000394106 DUTP33316 252 aaKnown RBP23.98■■□□□ 1.43
CMTM4-202ENST00000394106 ARPC4P59998 168 aa23.98■■□□□ 1.43
CMTM4-202ENST00000394106 NCS1P62166 190 aa23.98■■□□□ 1.43
CMTM4-202ENST00000394106 UBE2NLQ5JXB2 153 aa23.98■■□□□ 1.43
CMTM4-202ENST00000394106 ZNF645Q8N7E2 425 aa23.98■■□□□ 1.43
CMTM4-202ENST00000394106 SAMD12Q8N8I0 201 aa23.98■■□□□ 1.43
CMTM4-202ENST00000394106 C4orf3Q8WVX3 66 aa23.98■■□□□ 1.43
CMTM4-202ENST00000394106 S100A16Q96FQ6 103 aaKnown RBP23.98■■□□□ 1.43
CMTM4-202ENST00000394106 SHOXO15266 292 aa23.97■■□□□ 1.43
CMTM4-202ENST00000394106 IGLV2-23P01705 113 aa23.97■■□□□ 1.43
CMTM4-202ENST00000394106 HLA-DQB1P01920 261 aa23.97■■□□□ 1.43
CMTM4-202ENST00000394106 RRASP10301 218 aa23.97■■□□□ 1.43
CMTM4-202ENST00000394106 LGALS7P47929 136 aa23.97■■□□□ 1.43
CMTM4-202ENST00000394106 CRIP2P52943 208 aaPredicted RBP23.97■■□□□ 1.43
CMTM4-202ENST00000394106 VBP1P61758 197 aa23.97■■□□□ 1.43
CMTM4-202ENST00000394106 TMEM267Q0VDI3 215 aaPredicted RBP23.97■■□□□ 1.43
CMTM4-202ENST00000394106 C19orf54Q5BKX5 351 aa23.97■■□□□ 1.43
CMTM4-202ENST00000394106 ZNF562Q6V9R5 426 aa23.97■■□□□ 1.43
CMTM4-202ENST00000394106 REC114Q7Z4M0 266 aa23.97■■□□□ 1.43
CMTM4-202ENST00000394106 OR13F1Q8NGS4 319 aa23.97■■□□□ 1.43
CMTM4-202ENST00000394106 MYOZ3Q8TDC0 251 aa23.97■■□□□ 1.43
CMTM4-202ENST00000394106 FOXA2Q9Y261 457 aaPredicted RBP23.97■■□□□ 1.43
CMTM4-202ENST00000394106 IGKV1D-13A0A0B4J2D9 117 aa23.96■■□□□ 1.43
CMTM4-202ENST00000394106 LINC00473A8K010 186 aa23.96■■□□□ 1.43
CMTM4-202ENST00000394106 IGKV1-13P0DP09 117 aa23.96■■□□□ 1.43
CMTM4-202ENST00000394106 GNB1P62873 340 aa23.96■■□□□ 1.43
CMTM4-202ENST00000394106 TMEM177Q53S58 311 aa23.96■■□□□ 1.43
CMTM4-202ENST00000394106 UNQ5815/PRO19632Q6UWF5 114 aa23.96■■□□□ 1.43
CMTM4-202ENST00000394106 HOGA1Q86XE5 327 aa23.96■■□□□ 1.43
CMTM4-202ENST00000394106 GRPEL2Q8TAA5 225 aa23.96■■□□□ 1.43
CMTM4-202ENST00000394106 DDB2Q92466 427 aa23.96■■□□□ 1.43
CMTM4-202ENST00000394106 SLC25A46Q96AG3 418 aa23.96■■□□□ 1.43
CMTM4-202ENST00000394106 NUBP2Q9Y5Y2 271 aa23.96■■□□□ 1.43
CMTM4-202ENST00000394106 XRCC3O43542 346 aa23.95■■□□□ 1.42
CMTM4-202ENST00000394106 SOX15O60248 233 aa23.95■■□□□ 1.42
CMTM4-202ENST00000394106 TUSC2O75896 110 aa23.95■■□□□ 1.42
CMTM4-202ENST00000394106 SMIM18P0DKX4 95 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms