RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 ANKRD13BQ86YJ7 626 aa13.4□□□□□ -0.26
SNRPA1-202ENST00000394082 CLCC1Q96S66 551 aa13.4□□□□□ -0.26
SNRPA1-202ENST00000394082 SIGLEC8Q9NYZ4 499 aa13.4□□□□□ -0.26
SNRPA1-202ENST00000394082 C13orf42A0A1B0GVH6 325 aa13.39□□□□□ -0.27
SNRPA1-202ENST00000394082 SSBP2P81877 361 aaPredicted RBP13.39□□□□□ -0.27
SNRPA1-202ENST00000394082 TRAM1Q15629 374 aa13.39□□□□□ -0.27
SNRPA1-202ENST00000394082 SGPP2Q8IWX5 399 aa13.39□□□□□ -0.27
SNRPA1-202ENST00000394082 DRAXINQ8NBI3 349 aaPredicted RBP13.39□□□□□ -0.27
SNRPA1-202ENST00000394082 HDHD3Q9BSH5 251 aaPredicted RBP13.39□□□□□ -0.27
SNRPA1-202ENST00000394082 KCNK15Q9H427 330 aa13.39□□□□□ -0.27
SNRPA1-202ENST00000394082 PALMDQ9NP74 551 aa13.39□□□□□ -0.27
SNRPA1-202ENST00000394082 NKX1-2Q9UD57 310 aaPredicted RBP13.39□□□□□ -0.27
SNRPA1-202ENST00000394082 IGKV1-6A0A0C4DH72 117 aa13.38□□□□□ -0.27
SNRPA1-202ENST00000394082 LCE6AA0A183 80 aa13.38□□□□□ -0.27
SNRPA1-202ENST00000394082 TRDCB7Z8K6 153 aa13.38□□□□□ -0.27
SNRPA1-202ENST00000394082 H0Y980 276 aa13.38□□□□□ -0.27
SNRPA1-202ENST00000394082 SLC25A17O43808 307 aa13.38□□□□□ -0.27
SNRPA1-202ENST00000394082 CRYGBP07316 175 aa13.38□□□□□ -0.27
SNRPA1-202ENST00000394082 AADACP22760 399 aa13.38□□□□□ -0.27
SNRPA1-202ENST00000394082 PSMA1P25786 263 aaKnown RBP13.38□□□□□ -0.27
SNRPA1-202ENST00000394082 VEGFCP49767 419 aa13.38□□□□□ -0.27
SNRPA1-202ENST00000394082 SRSF7Q16629 238 aaKnown RBP eCLIP13.38□□□□□ -0.27
SNRPA1-202ENST00000394082 OR4A4PQ8NGN8 299 aa13.38□□□□□ -0.27
SNRPA1-202ENST00000394082 CMSS1Q9BQ75 279 aaKnown RBP13.38□□□□□ -0.27
SNRPA1-202ENST00000394082 EDA2RQ9HAV5 297 aa13.38□□□□□ -0.27
SNRPA1-202ENST00000394082 PLGRKTQ9HBL7 147 aa13.38□□□□□ -0.27
SNRPA1-202ENST00000394082 RDH8Q9NYR8 311 aa13.38□□□□□ -0.27
SNRPA1-202ENST00000394082 ARL6IP5O75915 188 aa13.37□□□□□ -0.27
SNRPA1-202ENST00000394082 IGLV2-23P01705 113 aa13.37□□□□□ -0.27
SNRPA1-202ENST00000394082 TPBGQ13641 420 aa13.37□□□□□ -0.27
SNRPA1-202ENST00000394082 IRF3Q14653 427 aa13.37□□□□□ -0.27
SNRPA1-202ENST00000394082 MED22Q15528 200 aa13.37□□□□□ -0.27
SNRPA1-202ENST00000394082 OR56B1Q8NGI3 324 aa13.37□□□□□ -0.27
SNRPA1-202ENST00000394082 OR9G4Q8NGQ1 327 aa13.37□□□□□ -0.27
SNRPA1-202ENST00000394082 GRPEL2Q8TAA5 225 aa13.37□□□□□ -0.27
SNRPA1-202ENST00000394082 UFD1Q92890 307 aa13.37□□□□□ -0.27
SNRPA1-202ENST00000394082 ISOC1Q96CN7 298 aa13.37□□□□□ -0.27
SNRPA1-202ENST00000394082 ARHGAP5-AS1Q96IT6 56 aa13.37□□□□□ -0.27
SNRPA1-202ENST00000394082 USMG5Q96IX5 58 aa13.37□□□□□ -0.27
SNRPA1-202ENST00000394082 GFI1Q99684 422 aa13.37□□□□□ -0.27
SNRPA1-202ENST00000394082 PECRQ9BY49 303 aa13.37□□□□□ -0.27
SNRPA1-202ENST00000394082 VCX3BQ9H321 246 aa13.37□□□□□ -0.27
SNRPA1-202ENST00000394082 SLC35D1Q9NTN3 355 aa13.37□□□□□ -0.27
SNRPA1-202ENST00000394082 SCN3BQ9NY72 215 aa13.37□□□□□ -0.27
SNRPA1-202ENST00000394082 PTGES3LE9PB15 166 aa13.36□□□□□ -0.27
SNRPA1-202ENST00000394082 CNIH1O95406 144 aa13.36□□□□□ -0.27
SNRPA1-202ENST00000394082 PSMD7P51665 324 aa13.36□□□□□ -0.27
SNRPA1-202ENST00000394082 LINC00205P59089 165 aa13.36□□□□□ -0.27
SNRPA1-202ENST00000394082 RAB11BQ15907 218 aa13.36□□□□□ -0.27
SNRPA1-202ENST00000394082 LIPKQ5VXJ0 399 aa13.36□□□□□ -0.27
SNRPA1-202ENST00000394082 ZNF343Q6P1L6 599 aa13.36□□□□□ -0.27
SNRPA1-202ENST00000394082 IL34Q6ZMJ4 242 aa13.36□□□□□ -0.27
SNRPA1-202ENST00000394082 TMEM91Q6ZNR0 172 aa13.36□□□□□ -0.27
SNRPA1-202ENST00000394082 CENPOQ9BU64 300 aa13.36□□□□□ -0.27
SNRPA1-202ENST00000394082 RSRP1Q9BUV0 290 aa13.36□□□□□ -0.27
SNRPA1-202ENST00000394082 TINAGL1Q9GZM7 467 aaPredicted RBP13.36□□□□□ -0.27
SNRPA1-202ENST00000394082 ZNF355PQ9NSJ1 428 aa13.36□□□□□ -0.27
SNRPA1-202ENST00000394082 STARD9Q9P2P6 4700 aa13.35□□□□□ -0.27
SNRPA1-202ENST00000394082 DNAH1Q9P2D7 4330 aa13.35□□□□□ -0.27
SNRPA1-202ENST00000394082 M0R1X1 148 aa13.35□□□□□ -0.27
SNRPA1-202ENST00000394082 RRASP10301 218 aa13.35□□□□□ -0.27
SNRPA1-202ENST00000394082 SNRPBP14678 240 aaKnown RBP13.35□□□□□ -0.27
SNRPA1-202ENST00000394082 P2RY14Q15391 338 aa13.35□□□□□ -0.27
SNRPA1-202ENST00000394082 TATDN3Q17R31 274 aa13.35□□□□□ -0.27
SNRPA1-202ENST00000394082 TMEM177Q53S58 311 aa13.35□□□□□ -0.27
SNRPA1-202ENST00000394082 PLAC9Q5JTB6 97 aa13.35□□□□□ -0.27
SNRPA1-202ENST00000394082 OR5T1Q8NG75 326 aa13.35□□□□□ -0.27
SNRPA1-202ENST00000394082 SPATA25Q9BR10 227 aa13.35□□□□□ -0.27
SNRPA1-202ENST00000394082 THAP7Q9BT49 309 aaPredicted RBP13.35□□□□□ -0.27
SNRPA1-202ENST00000394082 CABLES2Q9BTV7 478 aa13.35□□□□□ -0.27
SNRPA1-202ENST00000394082 FABP7O15540 132 aa13.34□□□□□ -0.27
SNRPA1-202ENST00000394082 CBX3Q13185 183 aa13.34□□□□□ -0.27
SNRPA1-202ENST00000394082 TMEM203Q969S6 136 aa13.34□□□□□ -0.27
SNRPA1-202ENST00000394082 FAM3DQ96BQ1 224 aa13.34□□□□□ -0.27
SNRPA1-202ENST00000394082 HARBI1Q96MB7 349 aa13.34□□□□□ -0.27
SNRPA1-202ENST00000394082 SDHAF2Q9NX18 166 aa13.34□□□□□ -0.27
SNRPA1-202ENST00000394082 PEF1Q9UBV8 284 aaKnown RBP13.34□□□□□ -0.27
SNRPA1-202ENST00000394082 AK6Q9Y3D8 172 aaKnown RBP13.34□□□□□ -0.27
SNRPA1-202ENST00000394082 TRBV6-7A0A0A0MS04 114 aa13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 DENRO43583 198 aaKnown RBP13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 OR2A4O95047 310 aa13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 AQP4P55087 323 aa13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 MRPS15P82914 257 aaKnown RBP13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 PJVKQ0ZLH3 352 aa13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 MLLT11Q13015 90 aaPredicted RBP13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 RTL8BQ17RB0 113 aa13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 C2orf76Q3KRA6 126 aa13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 LCN12Q6JVE5 192 aa13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 HAPLN4Q86UW8 402 aa13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 Q8N402 240 aa13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 TEX45Q8NA69 505 aa13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 OR2K2Q8NGT1 345 aa13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 OR10J5Q8NHC4 309 aa13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 NRG4Q8WWG1 115 aa13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 DUSP21Q9H596 190 aa13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 RAB22AQ9UL26 194 aa13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 KCNK7Q9Y2U2 307 aa13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 TPRKBQ9Y3C4 175 aa13.33□□□□□ -0.28
SNRPA1-202ENST00000394082 MECP2P51608 486 aaKnown RBP13.32□□□□□ -0.28
SNRPA1-202ENST00000394082 SYNJ2BPP57105 145 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms