RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 ZNF788Q6ZQV5 615 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 LILRB2Q8N423 598 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.84□□□□□ -0.51
MKS1-203ENST00000393120 CORO2AQ92828 525 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 GAFA1Q96PS6 74 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 OR4C12Q96R67 309 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 ZNF665Q9H7R5 613 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 GFOD1Q9NXC2 390 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 TIMM9Q9Y5J7 89 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 CEP250Q9BV73 2442 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 SCAF4O95104 1147 aaKnown RBP11.84□□□□□ -0.51
MKS1-203ENST00000393120 TNFRSF1AP19438 455 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 PAX6P26367 422 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 SLC38A11Q08AI6 406 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 LTC4SQ16873 150 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 HFEQ30201 348 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 FAM201AQ5SY85 155 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 WFDC8Q8IUA0 241 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 DTD1Q8TEA8 209 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 SFT2D1Q8WV19 159 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 MBD3L1Q8WWY6 194 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 PINX1Q96BK5 328 aaKnown RBP11.84□□□□□ -0.51
MKS1-203ENST00000393120 R3HDM4Q96D70 268 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 SMCO4Q9NRQ5 59 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 PRELID3BQ9Y3B1 194 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 MSRB2Q9Y3D2 182 aa11.84□□□□□ -0.51
MKS1-203ENST00000393120 TRGV10A0A0A0MS01 117 aa11.83□□□□□ -0.52
MKS1-203ENST00000393120 MEX3AA1L020 520 aaKnown RBP11.83□□□□□ -0.52
MKS1-203ENST00000393120 PMS2P5A8MQ11 134 aa11.83□□□□□ -0.52
MKS1-203ENST00000393120 C17orf100A8MU93 164 aa11.83□□□□□ -0.52
MKS1-203ENST00000393120 OR4A8P0C604 315 aa11.83□□□□□ -0.52
MKS1-203ENST00000393120 IRF2P14316 349 aa11.83□□□□□ -0.52
MKS1-203ENST00000393120 NFYBP25208 207 aa11.83□□□□□ -0.52
MKS1-203ENST00000393120 RBPJQ06330 500 aa11.83□□□□□ -0.52
MKS1-203ENST00000393120 ZNF506Q5JVG8 444 aa11.83□□□□□ -0.52
MKS1-203ENST00000393120 RSG1Q9BU20 258 aa11.83□□□□□ -0.52
MKS1-203ENST00000393120 COL25A1Q9BXS0 654 aaPredicted RBP11.83□□□□□ -0.52
MKS1-203ENST00000393120 UNKLQ9H9P5 680 aaKnown RBP11.83□□□□□ -0.52
MKS1-203ENST00000393120 M0R1X1 148 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 CYB5R3P00387 301 aaPredicted RBP11.82□□□□□ -0.52
MKS1-203ENST00000393120 LINC00205P59089 165 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 GNB2P62879 340 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 BSPH1Q075Z2 132 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 PDLIM3Q53GG5 364 aaPredicted RBP11.82□□□□□ -0.52
MKS1-203ENST00000393120 FRYQ5TBA9 3013 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 OR52E5Q8NH55 327 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 DDB2Q92466 427 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 TAF15Q92804 592 aaKnown RBP eCLIP11.82□□□□□ -0.52
MKS1-203ENST00000393120 RARRES2Q99969 163 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 RPRMQ9NS64 109 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 PRRC2CQ9Y520 2896 aaKnown RBP11.82□□□□□ -0.52
MKS1-203ENST00000393120 ZNF729A6NN14 1252 aaPredicted RBP11.82□□□□□ -0.52
MKS1-203ENST00000393120 VSTM5A8MXK1 200 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 H7C2Y5 167 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 ZG16O60844 167 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 FCGR3BO75015 233 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 HSPB1P04792 205 aaKnown RBP11.82□□□□□ -0.52
MKS1-203ENST00000393120 SELLP14151 372 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 VWC2Q2TAL6 325 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 FAM122CQ6P4D5 195 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 CLDND2Q8NHS1 167 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 S1PR3Q99500 378 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 TMEM147Q9BVK8 224 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 TUBA4BQ9H853 241 aa11.82□□□□□ -0.52
MKS1-203ENST00000393120 CACNA1DQ01668 2161 aa11.81□□□□□ -0.52
MKS1-203ENST00000393120 A0A1B0GV50 99 aa11.81□□□□□ -0.52
MKS1-203ENST00000393120 TMEM41BQ5BJD5 291 aa11.81□□□□□ -0.52
MKS1-203ENST00000393120 CT45A1Q5HYN5 189 aa11.81□□□□□ -0.52
MKS1-203ENST00000393120 SOHLH1Q5JUK2 328 aa11.81□□□□□ -0.52
MKS1-203ENST00000393120 OR10P1Q8NGE3 313 aa11.81□□□□□ -0.52
MKS1-203ENST00000393120 OR10G4Q8NGN3 311 aa11.81□□□□□ -0.52
MKS1-203ENST00000393120 CT45A3Q8NHU0 189 aa11.81□□□□□ -0.52
MKS1-203ENST00000393120 RND1Q92730 232 aa11.81□□□□□ -0.52
MKS1-203ENST00000393120 CCL13Q99616 98 aa11.81□□□□□ -0.52
MKS1-203ENST00000393120 VKORC1Q9BQB6 163 aa11.81□□□□□ -0.52
MKS1-203ENST00000393120 NGBQ9NPG2 151 aa11.81□□□□□ -0.52
MKS1-203ENST00000393120 CADP27708 2225 aa11.81□□□□□ -0.52
MKS1-203ENST00000393120 SRP19P09132 144 aaKnown RBP11.8□□□□□ -0.52
MKS1-203ENST00000393120 NQO2P16083 231 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 PMS2P11Q13670 270 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 ICAM4Q14773 271 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 RHEBQ15382 184 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 KHDC3LQ587J8 217 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 RPL39P5Q59GN2 51 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 OR8G2PQ6IF36 304 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 TCF23Q7RTU1 214 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 ZNF439Q8NDP4 499 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 ADTRPQ96IZ2 230 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 IDI2-AS1Q9NZ38 188 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 C7orf77A4D0Y5 90 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 CEBPZOSA8MTT3 80 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 RBMXL2O75526 392 aaKnown RBP11.8□□□□□ -0.52
MKS1-203ENST00000393120 GYPAP02724 150 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 OR9G9P0C7N8 305 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 MDKP21741 143 aaPredicted RBP11.8□□□□□ -0.52
MKS1-203ENST00000393120 SPCS3P61009 180 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 FLI1Q01543 452 aaPredicted RBP11.8□□□□□ -0.52
MKS1-203ENST00000393120 SMUG1Q53HV7 270 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 PRR30Q53SZ7 412 aaPredicted RBP11.8□□□□□ -0.52
MKS1-203ENST00000393120 AWAT1Q58HT5 328 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms