RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 SNX29P2Q8IUI4 249 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 TRAPPC5Q8IUR0 188 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 SLC30A8Q8IWU4 369 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 UBALD2Q8IYN6 164 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 HIST3H2BBQ8N257 126 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 SPICQ8N5J4 248 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 C8orf31Q8N9H6 132 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 CHST4Q8NCG5 386 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 SLC30A7Q8NEW0 376 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 OR4E2Q8NGC2 313 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 OR52L1Q8NGH7 329 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 OR56A4Q8NGH8 313 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 OR52E4Q8NGH9 312 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 OR9Q1Q8NGQ5 310 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 OR5AK3PQ8NH89 298 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 FAM45AQ8TCE6 357 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 CASTOR1Q8WTX7 329 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 C15orf40Q8WUR7 153 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 LRRC29Q8WV35 223 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 CYGBQ8WWM9 190 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 POP5Q969H6 163 aaKnown RBP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 STARD4Q96DR4 205 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 SFRP2Q96HF1 295 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 CPB2Q96IY4 423 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 ERMAPQ96PL5 475 aaPredicted RBP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 OR2A7Q96R45 310 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 OR52E6Q96RD3 313 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 S100A13Q99584 98 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 NDFIP1Q9BT67 221 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 TBL1XR1Q9BZK7 514 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 ULBP1Q9BZM6 244 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 OR8D2Q9GZM6 311 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 RHOFQ9HBH0 211 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 LRTM1Q9HBL6 345 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 ACP6Q9NPH0 428 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 CHRAC1Q9NRG0 131 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 SMCO4Q9NRQ5 59 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 PLEKHJ1Q9NW61 149 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 RBM22Q9NW64 420 aaKnown RBP eCLIP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 DMAC2Q9NW81 257 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 CLN6Q9NWW5 311 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 AHSPQ9NZD4 102 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 VPS29Q9UBQ0 182 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 TRMT112Q9UI30 125 aaKnown RBP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF391Q9UJN7 358 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 DKKL1Q9UK85 242 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 URGCP-MRPS24S4R325 110 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 HELZP42694 1942 aaKnown RBP1.89□□□□□ -2.11
PTPRC-205ENST00000391970 SBF2Q86WG5 1849 aa1.89□□□□□ -2.11
PTPRC-205ENST00000391970 COL1A1P02452 1464 aaPredicted RBP1.88□□□□□ -2.11
PTPRC-205ENST00000391970 BRCA1P38398 1863 aaKnown RBP1.88□□□□□ -2.11
PTPRC-205ENST00000391970 CACNA1SQ13698 1873 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 LTBP4Q8N2S1 1624 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 LOXHD1Q8IVV2 1947 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 A0A0J9YY10 115 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 A0A1B0GX78 115 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 C20orf202A1L168 122 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 OR6C6A6NF89 314 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 DISC1C4P0D8 188 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 PPP5D1E7EU14 171 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 E7EWF7 191 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 H3BN98 237 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 CXCR6O00574 342 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 SLC31A1O15431 190 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 CCL25O15444 150 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 PLA2G10O15496 165 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 FABP7O15540 132 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 CYB5BO43169 146 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 OR2T1O43869 369 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 FCN3O75636 299 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 CYB5R3P00387 301 aaPredicted RBP1.88□□□□□ -2.11
PTPRC-205ENST00000391970 PDYNP01213 254 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 APOC3P02656 99 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 TYMSP04818 313 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 CST2P09228 141 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 OR4Q2P0C623 313 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 UBBP0CG47 229 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 C8orf88P0DMB2 117 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 OR13C7P0DN81 318 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 TCN2P20062 427 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 S100A2P29034 98 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 CMPK1P30085 196 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 MIPP30301 263 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 ADORA1P30542 326 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 RPL22P35268 128 aaKnown RBP1.88□□□□□ -2.11
PTPRC-205ENST00000391970 AKR1C3P42330 323 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 TTPAP49638 278 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 P2RX1P51575 399 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 HCCSP53701 268 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 OR10A3P58181 314 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 OR2B8PP59922 312 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 TBPL1P62380 186 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 UBA52P62987 128 aaKnown RBP1.88□□□□□ -2.11
PTPRC-205ENST00000391970 SLC35A1P78382 337 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 LOXL1Q08397 574 aaPredicted RBP1.88□□□□□ -2.11
PTPRC-205ENST00000391970 PNOCQ13519 176 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 HMGN3Q15651 99 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 GABRA6Q16445 453 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 MAPK14Q16539 360 aa1.88□□□□□ -2.11
PTPRC-205ENST00000391970 ORMDL2Q53FV1 153 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms