RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 PDPNQ86YL7 162 aa8.9□□□□□ -0.98
IGHV4-28-201ENST00000390612 ZNF695Q8IW36 515 aa8.9□□□□□ -0.98
IGHV4-28-201ENST00000390612 MRPL41Q8IXM3 137 aaKnown RBP8.9□□□□□ -0.98
IGHV4-28-201ENST00000390612 DDB2Q92466 427 aa8.9□□□□□ -0.98
IGHV4-28-201ENST00000390612 ST6GALNAC5Q9BVH7 336 aa8.9□□□□□ -0.98
IGHV4-28-201ENST00000390612 OR2D2Q9H210 308 aa8.9□□□□□ -0.98
IGHV4-28-201ENST00000390612 VCX3AQ9NNX9 186 aa8.9□□□□□ -0.98
IGHV4-28-201ENST00000390612 KIAA1456Q9P272 454 aa8.9□□□□□ -0.98
IGHV4-28-201ENST00000390612 FBXO7Q9Y3I1 522 aa8.9□□□□□ -0.98
IGHV4-28-201ENST00000390612 DNAH9Q9NYC9 4486 aa8.9□□□□□ -0.99
IGHV4-28-201ENST00000390612 TRAV18A0A075B6X5 111 aa8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 H7C2Y5 167 aa8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 SPDEFO95238 335 aa8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 IGLV2-23P01705 113 aa8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 HLA-DQB1P01920 261 aa8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 CRYGBP07316 175 aa8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 VDAC1P21796 283 aa8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 MYCNOSP40205 109 aa8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 SSBP2P81877 361 aaPredicted RBP8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 TAGLNQ01995 201 aaKnown RBP8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 CXorf66Q5JRM2 361 aaPredicted RBP8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 KHDC1LQ5JSQ8 128 aa8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 ZNF562Q6V9R5 426 aa8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 C8orf86Q6ZUL3 223 aa8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 OR13F1Q8NGS4 319 aa8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 TSNAXQ99598 290 aaKnown RBP8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 GINS4Q9BRT9 223 aa8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 FUNDC2Q9BWH2 189 aa8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 KLK15Q9H2R5 256 aa8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 AUNIPQ9H7T9 357 aa8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 SLC35D1Q9NTN3 355 aa8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 ANXA10Q9UJ72 324 aa8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 WSB1Q9Y6I7 421 aa8.89□□□□□ -0.99
IGHV4-28-201ENST00000390612 TRAV41A0A0B4J266 112 aa8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 XRCC3O43542 346 aa8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 SOX15O60248 233 aa8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 IGLV2-14P01704 120 aa8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 APOA2P02652 100 aa8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 PF4P02776 101 aa8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 IGLL1P15814 213 aa8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 CD33P20138 364 aa8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 DUTP33316 252 aaKnown RBP8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 LGALS7P47929 136 aa8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 GNG2P59768 71 aa8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 RPS16P62249 146 aaKnown RBP8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 LSM3P62310 102 aaKnown RBP8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 EIF4EBP1Q13541 118 aaPredicted RBP8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 MRGPRG-AS1Q2M3A8 158 aa8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 TMEM177Q53S58 311 aa8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 HOGA1Q86XE5 327 aa8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 KLHL30-AS1Q8NEE0 82 aa8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 SLC25A46Q96AG3 418 aa8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 FLYWCH2Q96CP2 140 aaKnown RBP8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 RCC1LQ96I51 464 aaKnown RBP8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 RAX2Q96IS3 184 aa8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 PARP11Q9NR21 331 aa8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 DIABLOQ9NR28 239 aa8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 OR2W1Q9Y3N9 320 aa8.88□□□□□ -0.99
IGHV4-28-201ENST00000390612 IGKV1D-13A0A0B4J2D9 117 aa8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 SRRM4A7MD48 611 aaKnown RBP8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 LINC00473A8K010 186 aa8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 CCL24O00175 119 aa8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 DUS4LO95620 317 aaKnown RBP8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 IGKV1-13P0DP09 117 aa8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 NFYAP23511 347 aaPredicted RBP8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 NCS1P62166 190 aa8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 RUNX1Q01196 453 aa8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 AKIRIN2Q53H80 203 aa8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 FOXB2Q5VYV0 432 aa8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 ZNF645Q8N7E2 425 aa8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 GVQW1Q8N7I0 195 aa8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 ZNF491Q8N8L2 437 aa8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 KCTD12Q96CX2 325 aaKnown RBP8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 ADTRPQ96IZ2 230 aa8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 UBE2E2Q96LR5 201 aa8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 TPSG1Q9NRR2 321 aa8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 METTL1Q9UBP6 276 aaKnown RBP8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 ANAPC10Q9UM13 185 aa8.87□□□□□ -0.99
IGHV4-28-201ENST00000390612 NUDT19A8MXV4 375 aa8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 I3L521 148 aa8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 ARPC1BO15143 372 aaKnown RBP8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 SLC25A17O43808 307 aa8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 SLC22A5O76082 557 aa8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 RRASP10301 218 aa8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 PTHLHP12272 177 aa8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 RAB9AP51151 201 aa8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 LUMP51884 338 aaPredicted RBP8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 EGFEM1PQ0D2K5 195 aa8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 FHL3Q13643 280 aa8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 UBE2NLQ5JXB2 153 aa8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 REC114Q7Z4M0 266 aa8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 PPP1R27Q86WC6 154 aa8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 ANKRD13BQ86YJ7 626 aa8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 TCTEX1D1Q8N7M0 179 aa8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 BVESQ8NE79 360 aa8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 BEST4Q8NFU0 473 aa8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 C4orf3Q8WVX3 66 aa8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 SNAPC3Q92966 411 aa8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 S100A16Q96FQ6 103 aaKnown RBP8.86□□□□□ -0.99
IGHV4-28-201ENST00000390612 DUX3Q96PT4 197 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms